Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Callithrix_20jacchus_20[refseq_20GCF_5F000004665.1_202010-01-22] 14,205 sequences; 2,914,958,544 total letters Query= NC_022749.1 Length=39758 Score E Sequences producing significant alignments: (Bits) Value seq274 84.2 6e-12 >seq274 Length=204313951 Score = 84.2 bits (92), Expect = 6e-12 Identities = 268/400 (67%), Gaps = 12/400 (3%) Strand=Plus/Plus Query 35189 GATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTC 35248 |||||||| | ||||||| | | |||| || ||||||||| | ||||| | || |||| Sbjct 6492697 GATGCTGCGATATTACTGAATAAATGTAAGACGGTGTTTTTAAAGTGCTTTATTGCCTTC 6492756 Query 35249 TGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACG-GCAAAA 35307 ||| || | ||||| ||| ||| || ||| || |||||| ||| || ||| Sbjct 6492757 TGTATCATGAACCTGTCGCTCGTGTACATCTATAGAATATGTGGTGAAAAACAAGCTAAA 6492816 Query 35308 GCACCGCCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAACATGGCAACTGCAGT 35367 || | | ||| |||||||||||||| ||||| | | || |||| | Sbjct 6492817 TTCCCAACCGCTGACAGGACTATCTCTGCTCTCTCTGCCAAATCTCTCGGGTCCTGCTTT 6492876 Query 35368 TCACTTACACCGCTTCTCAACCCGGTACGCACCAGAAAATCATTGATAT-GGCCATGAAT 35426 | ||||||||| | || || | ||| | || | ||| |||||| | || | | | Sbjct 6492877 TTGCTTACACCGTGTATCTCCCAGCTACTC-CCTTCATATCTCTGATATAGACCCTTATT 6492935 Query 35427 GGCGTTGGATGCC-GGGCAACAGCCCGCATTAT-GGGCGTTGGCCTCAACACGATTTTAC 35484 | |||| || || || || | ||| | ||| |||||| || | |||| || |||| Sbjct 6492936 GTGGTTGAATTCCTAGGTAAAAACCCCAACTATCGGGCGTATGCGTAAACAGAATATTAC 6492995 Query 35485 GTCACTTAAAAAACTCAGGCCGCA-GTCGGTAACCTCGCGCATACAGCC-GGGCAGTGAC 35542 | |||| | | | ||||||| | || |||||| |||||| |||| || || ||| Sbjct 6492996 AGGCCCTAAAGATC-CCGGCCGCATCTGGGAAACCTC-CGCATA-AGCCTGGACACCGAC 6493052 Query 35543 GTCAT-CGTCTGCGCGGAAATGGACGAACAGTGGGGCTAT 35581 ||| || ||| | |||||||||| | ||||||| ||| Sbjct 6493053 TGCATACGCCTG-GGGGAAATGGACATAGAGTGGGGGTAT 6493091 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 127082559541200