Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Callithrix_20jacchus_20[refseq_20GCF_5F000004665.1_202010-01-22] 14,205 sequences; 2,914,958,544 total letters Query= NC_027016.1 Length=226084 Score E Sequences producing significant alignments: (Bits) Value seq1997 118 2e-21 >seq1997 Length=47448759 Score = 118 bits (130), Expect = 2e-21 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 213996 AGATTATTGACGGGGAAGTCTACCCTCCTACCGTCAAGGAGGCCCGAGTGCATATGGTTT 214055 |||| ||||| || || | || ||||| || ||||| || | | | | ||| | | Sbjct 19537507 AGATAATTGATGGAGAGATGTATCCTCCCACAGTCAAAGATACTCAGGCAGAGATGATCT 19537566 Query 214056 ACGAACCCAGCGTTCCCGAAAAGTTACGTTTCGCACTGGGTAACGAGATGTTTGGACTCG 214115 || || ||||| || | | || || || |||| | ||| | ||||| || | Sbjct 19537567 ACCCTCCTCAAGTTCCTGAGCATCTGCGGTTTGCGGTGGGGCAGGAGGTCTTTGGTCTGG 19537626 Query 214116 TGCCCGGTTTCATGGTGTACGCCATTATCTGGCTGAGAGAGCACAACAGGGTTTGCGACG 214175 |||| ||| | ||| |||| |||| ||||||||||| ||||||||||| || ||||| | Sbjct 19537627 TGCCTGGTCTGATGATGTATGCCACAATCTGGCTGAGGGAGCACAACAGAGTATGCGATG 19537686 Query 214176 TGCTGAAACAAGAGCACCCGGAATGGAACGACGAACAGCTGTTCCAGA 214223 |||| ||||| ||||| ||||||||| || || ||| ||||||||| Sbjct 19537687 TGCTTAAACAGGAGCATCCGGAATGGGGTGATGAGCAGTTGTTCCAGA 19537734 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 723212361799200