Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Callithrix_20jacchus_20[refseq_20GCF_5F000004665.1_202010-01-22] 14,205 sequences; 2,914,958,544 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq435 408 6e-109 seq798 365 6e-96 seq1004 334 1e-86 seq848 257 2e-63 seq2320 185 1e-41 seq1721 143 4e-29 seq1882 116 5e-21 seq699 114 2e-20 seq1441 105 9e-18 seq1556 86.0 9e-12 >seq435 Length=190850796 Score = 408 bits (452), Expect = 6e-109 Identities = 654/936 (70%), Gaps = 11/936 (1%) Strand=Plus/Minus Query 39270 TTTAAAAGTCAACATCTAAAGAAAAATGATTATCTTCTTG---TGACATAACTCCCATTT 39326 |||| |||||| |||| || | |||| ||| ||| | | |||||| |||||||| Sbjct 47340715 TTTACAAGTCAGCATCCAAGGTAAAAGAATTCTCTGTTGGACTTGACATCACTCCCATCC 47340656 Query 39327 TTTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTTT 39386 | || || | || || | ||||| || || ||||| || ||||||| ||| ||||| | Sbjct 47340655 TCTGATACTTGCCTACTCTCTTCTCAAAGAAGTTAGTCTTTCCTTCCAGTGAAATATTCT 47340596 Query 39387 CCATGAAATCAAACGGATTAGTTGCATTATAtttttttttAAATCCTAATTCTGAAATCA 39446 |||| || ||||| ||||| | | | | || |||| || | ||| || | Sbjct 47340595 CCATAAAGTCAAATGGATTCTCTACTCTGAAAACCTTGCTAAAACCCAGTTCCAGCATAA 47340536 Query 39447 ATCTATCTGCAACAAATTCTATGTATGTTTTCATCATTTCACAATTCATTCCTATGAGTT 39506 ||| ||||| ||||| || ||| || ||||| | |||||| | || ||||| | Sbjct 47340535 GTCTGTCTGCTACAAACTCAATGCATTGCTTCATTAGAGTGCAATTCTTCCCAATGAGCT 47340476 Query 39507 TAACTGGTAGAGCCTCCGTTAGAAACTCTTTTTCGATGTCTACGGCCTCTGTTATTATCG 39566 | || || | ||||| || || | ||| | ||| || | || | | ||||| Sbjct 47340475 TCACAGGCAAGGCCTCAGTGAGGAGCTCCTGTTCTATCCGAATAGCATTGATAATTATTT 47340416 Query 39567 ATGTTACTACCTCATCACTCGGTGGATGCAATAAATGTTTAAACATTAAGCAGGCGAAGT 39626 | ||||| ||| || ||| || | || ||||| ||||| | ||| || || | Sbjct 47340415 CTCTTACTCTCTCCTCTGATGGTTTGTGTACTAGCTGTTTGAACATCAGGCAAGCAAAAT 47340356 Query 39627 CACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCATTA 39686 |||| |||| ||||||||||| ||||| | ||| |||||||||||||| |||||||| | Sbjct 47340355 CACAGTGTAAACCCTCATCTCTGCTAATAAGTTCATTAGAAAATGTGAGGCCAGGCATCA 47340296 Query 39687 GACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTTCTA 39746 | || || || |||||||| ||||||| |||||||| |||||||||||||||||||| | Sbjct 47340295 GTCCTCGTTTCTTGAGCCAGAATATGGATGCAAAAGAACCAGAAAAGAAGATGCCTTCCA 47340236 Query 39747 CTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTATCATTATGTATCCACTTCTGTG 39806 |||| ||||| || || | | || || || | || || || || ||| | | | | Sbjct 47340235 CTGCAGCAAAGGCTACGACACCTTCACCATAGGTAGTCTCTTT--GTCCCCAATCCAGGG 47340178 Query 39807 C-----CCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGATA 39861 | |||||| || |||||||| ||||||||||| ||||| || ||||| |||||| | Sbjct 47340177 CAAGGTCCAATCTGCATTCTTCTTGACACAAGGCATCGTTTCAATGGCATTGAAGAGAAA 47340118 Query 39862 ATGTTTTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATACATTTCTGAATG 39921 | |||| | |||||| | || || || || | |||||||||||||| ||||| Sbjct 47340117 TTCCCTTTCGTTGGGATCTTTTATGTAAGTGTCAATAAGGAGACTATACATTTCAGAATG 47340058 Query 39922 GATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATTTGTACCTC 39981 |||||||| || || || || || || || ||||| | ||||| ||||| || || || Sbjct 47340057 TATGTTTTCCATGGCAATTTGGAAGCCATAGAAACAGCAGGCTTCTGTAATCTGAACTTC 47339998 Query 39982 TGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGGCAAAAAATGC 40041 | | ||||| ||| |||| |||||||| ||||| |||||||| || ||||| || || Sbjct 47339997 TTGGCTAAATCACTCCACCAAGTTTTCATTTACTATGCCATCACTTGCTGCAAAGAAAGC 47339938 Query 40042 CAATACATGTTTAATAAAATATTTTTCATCGGGTGTCAATTTATTCCAGTCATTGATATC 40101 || ||||| ||||| ||| | || || || ||| | ||||| || || Sbjct 47339937 CAGAACATGGGATATAAAGTATCTCTCCTCCGGCTTCAGGGATTCCCAGTGCCAAATGTC 47339878 Query 40102 TTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCTTTTTGTACATGTT 40161 || || | || || || | || ||||| || || ||||| ||||| || ||||| | Sbjct 47339877 CTTGGACAGGTCCACCTCCT-GGCGGTCCAGAAGGAGGCCTCCGCCTTCTTATACATCTG 47339819 Query 40162 CCATATATCACGATATTGTATTGGAAAAATAACAAA 40197 ||| ||||| | || | || || ||||| ||||| Sbjct 47339818 CCAGATATCGTGGTACTCCATGGGGAAAATGACAAA 47339783 >seq798 Length=25304 Score = 365 bits (404), Expect = 6e-96 Identities = 626/901 (69%), Gaps = 12/901 (1%) Strand=Plus/Minus Query 39267 TTCTTTAAAAGTCAACATCTAAAGAAAAATGATTATCTTCTTG---TGACATAACTCCCA 39323 || |||| |||||| |||| || | |||| ||| ||| | |||||| ||||||| Sbjct 1757 TTATTTAGAAGTCAGCATCCAAGGTAAAAAAATTCTCTGTTAAACTTGACATCACTCCCA 1698 Query 39324 TTTTTTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATAT 39383 | | || || || || || | ||||| | || ||||| || |||| | ||| |||| Sbjct 1697 TCCTCTGATACTCGCCTACTCTCTTCTCAGAGAAGTTAGTCTTTCCTTGCTGTGAAATAT 1638 Query 39384 TTTCCATGAAATCAAACGGATTAGTTGCATTATAtttttttttAAATCCTAATTCTGAAA 39443 | ||||| || ||||| ||||| | | | | || |||| || | ||| | Sbjct 1637 TCTCCATAAAGTCAAATGGATTTTCTACTCTGAAAACCTTGCTAAAACCCAGTTCCAGCA 1578 Query 39444 TCAATCTATCTGCAACAAATTCTATGTATGTTTTCATCATTTCACAATTCATTCCTATGA 39503 | | ||| ||||| ||||| || |||| | ||| | | |||||||| || |||| Sbjct 1577 TAAGTCTGTCTGCCACAAACTCAATGTGTTGCTTCCTTAGAGTGCAATTCATCCCAATGA 1518 Query 39504 GTTTAACTGGTAGAGCCTCCGTTAGAAACTCTTTTTCGATGTCTACGGCCTCTGTTATTA 39563 || || || | ||||| || || ||||| | ||| || || | || | |||| Sbjct 1517 ACTTCACAGGCAAGGCCTCAGTGAGGAACTCCTGTTCTATCCAAACAGAATCAATAATTA 1458 Query 39564 TCGATGTTACTACCTCATCACTCGGTGGATGCAATAAATGTTTAAACATTAAGCAGGCGA 39623 | || ||||| ||| || ||| || | || ||||| ||||| | ||| || | Sbjct 1457 TTTATCTTACTCTCTCCTCTGATGGTTTGTGTACTAGGTGTTTGAACATCAGGCAAGCAA 1398 Query 39624 AGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCA 39683 | ||||| |||| ||||||||||| ||||| | ||| |||||||||||||| ||||||| Sbjct 1397 AATCACAGTGTAAACCCTCATCTCTGCTAATAAGTTCATTAGAAAATGTGAGGCCAGGCA 1338 Query 39684 TTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTT 39743 | || || || || |||||||| ||||||| |||||||| ||||||||||||| ||||| Sbjct 1337 TCAGTCCTCGTTTCTTGAGCCAGAATATGGATGCAAAAGAACCAGAAAAGAAGACGCCTT 1278 Query 39744 CTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTATCATTAT---GTATCCACT 39800 | ||||| ||||| || || | | || || || | | || || | ||||| Sbjct 1277 CCACTGCAGCAAAGGCTACGACGCGTTCACCATAGGTAGCGTCTTTGTCCCCAATCCAGC 1218 Query 39801 TCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGAT 39860 | ||||| || || |||||||| ||||||||||| ||||| || ||||| |||||| Sbjct 1217 ACAAGGCCCAGTCTGCCTTCTTCTTGACACAAGGCATCGTTTCAATGGCATTGAAGAGAA 1158 Query 39861 AATGTTTTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATACATTTCTGAAT 39920 | | |||| | |||||| | ||| || || || |||||||||||||| |||| Sbjct 1157 ATTCCCTTTCGTTGGGATCTTTTATATAAGTGTCAATACGGAGACTATACATTTCAGAAT 1098 Query 39921 GGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATTTGTACCT 39980 | |||||||| || || || || || || || ||||| | ||||| || || || || | Sbjct 1097 GTATGTTTTCCATGGCAATTTGGAAGCCATAGAAACAGCGGGCTTCTGTGATCTGAACTT 1038 Query 39981 -CTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGGCAAAAAAT 40039 ||| | ||||| ||| |||| |||||||| ||||| |||||| | | ||||| || Sbjct 1037 ACTG-GCTAAATCGCTCCACCAAGTTTTCATTTACTATGCCATCATTCACTGCAAAGAAA 979 Query 40040 GCCAATACATGTTTAATAAAATATTTTTCATCGGGTGTCAATTTATTCCAGTCATTGATA 40099 |||| || || ||||| ||| |||| ||||| ||| | ||||| ||| | Sbjct 978 GCCAGAACGTGGGATATAAAGTATCTTTCCTCGGGCTTCAGGGATTCCCAGT-GCTGA-A 921 Query 40100 TCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCTTTTTGTACATG 40159 | | | || | || || || || || ||||| || || ||||| ||||| | |||||| Sbjct 920 TGTCTGGACAGGTCCACCTCCTCGGCGGTCCAGAAGGAGGCCTCCGCCTTCT--TACATG 863 Query 40160 T 40160 | Sbjct 862 T 862 >seq1004 Length=155834243 Score = 334 bits (370), Expect = 1e-86 Identities = 561/806 (70%), Gaps = 13/806 (2%) Strand=Plus/Minus Query 39276 AGTCAACATCTAAAGAAAAATGATTATCTTCTTG---TGACATAACTCCCATTTTTTGGT 39332 ||||| |||| || | |||| ||| ||| | | |||||| |||||||| | || | Sbjct 136911675 AGTCAGCATCCAAGGTAAAAGAATTCTCTGTTGGACTTGACATCACTCCCATCCTCTGAT 136911616 Query 39333 ATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTTTCCATGA 39392 || || || | ||||| || || ||||| || ||||||| ||| ||||| ||||| | Sbjct 136911615 GCTCGCCTACTCTCTTCTCAAAGAAGTTAGTCTTTCCTTCCAGTGAAATATTCTCCATAA 136911556 Query 39393 AATCAAACGGATTAGTTGCATTATAtttttttttAAATCCTAATTCTGAAATCAATCTAT 39452 | ||||| ||||| | | | | || |||| || | ||| | | ||| | Sbjct 136911555 AGTCAAATGGATTCTCTACTCTGAAAACCTTGCTAAAACCCAGTTCCAGCTTAAGTCTGT 136911496 Query 39453 CTGCAACAAATTCTATGTATGTTTTCATCATTTCACAATTCATTCCTATGAGTTTAACTG 39512 |||| ||||| || | |||| ||||| | |||||||| || ||||| || || | Sbjct 136911495 CTGCTACAAACTCAACGTATTGCTTCATTAGAGTGCAATTCATCCCAATGAGCTTCACAG 136911436 Query 39513 GTAGAGCCTCCGTTAGAAACTCTTTTTCGATGTCTACGGCCTCTGTTA-TTATCGATGTT 39571 | | ||||| || || | ||| | ||| || || || ||| || |||| | || Sbjct 136911435 GCAAGGCCTCAGTGAGGAGCTCCTGTTCTATCGGAACAGCA-CTGATAATTATT--TCTT 136911379 Query 39572 ACTACCTCATCACTCGGTGGATGCAATAAATGTTTAAACATTAAGCAGGCGAAGTCACAA 39631 ||| ||| || ||| || || ||||| ||||| | ||| || || ||||| Sbjct 136911378 ACTCTCTCCTCTGATGGTTTGTGTCCTAGGTGTTTGAACATCAGGCAAGCAAAATCACAG 136911319 Query 39632 TGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCATTAGACCA 39691 |||| ||||| ||||| ||||| | ||| ||||||||| |||| | |||||| || || Sbjct 136911318 TGTAAACCCTCCTCTCTGCTAATAAGTTCATTAGAAAATATGAGGCTAGGCATCAGTCCT 136911259 Query 39692 CGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTTCTACTGCT 39751 || || |||||||| ||||||| |||||||| |||||||||||||||||||| ||||| Sbjct 136911258 CGTTTCTTGAGCCAGAATATGGATGCAAAAGAACCAGAAAAGAAGATGCCTTCCACTGCA 136911199 Query 39752 GCAAATGCAACAAGTCTCTCTCCGTAACTTGTATCATTAT---GTATCCACTTCTGTGCC 39808 ||||| || || | | || || || | | || || | ||||| | ||| Sbjct 136911198 GCAAAGGCTACGACGCGTTCACCATAGGTAGCCTCTTTGTCCCCAATCCAGCGCAAGGCC 136911139 Query 39809 CAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGATAATGTTTT 39868 ||||| || |||||||| ||||||||||| ||||| || ||||| |||||| | | || Sbjct 136911138 CAATCTGCCTTCTTCTTGACACAAGGCATCGTTTCAATGGCATTGAAGAGAAATTCCCTT 136911079 Query 39869 TCATCACTATCTTTAACATATGTATCTATTAACAGACTATACATTTCTGAATGGATGTTT 39928 || |||||| | || || || || |||||||||||||| ||||| |||||| Sbjct 136911078 TCCCTGGGATCTTTTATGTAAGTGTCAAT---GAGACTATACATTTCAGAATGTATGTTT 136911022 Query 39929 TCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATTTGTACCTCTGAACAA 39988 || || || || || || || || ||||| | ||||| || || || || ||| | | Sbjct 136911021 TCCATGGCAATTTGGAAGCCATAGAAACAGCGGGCTTCTGTGATCTGAACTTCTTGGCTA 136910962 Query 39989 AATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGGCAAAAAATGCCAATACA 40048 |||| ||| || |||||||||||||| ||||| || || ||||| || |||| || Sbjct 136910961 AATCGCTCCACCGGGTTTTCATTCACTATGCCATCGCTCGCTGCAAAGAAAGCCAGAACG 136910902 Query 40049 TGTTTAATAAAATATTTTTCATCGGG 40074 || ||||| ||| | || ||||| Sbjct 136910901 TGGGATATAAAGTATCTCTCCTCGGG 136910876 >seq848 Length=158406734 Score = 257 bits (284), Expect = 2e-63 Identities = 659/993 (66%), Gaps = 39/993 (4%) Strand=Plus/Minus Query 69600 TTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCTGGTTCTATTTTCTTC 69659 ||||||||| ||||| ||||||||||| || ||| |||||||||| | | |||||| Sbjct 81182114 TTTCATAAAGAGATCTGGAATCCAAAGGGC---AAAAAGATCTCTGGCACGCTGTTCTTC 81182058 Query 69660 ATTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAG 69719 |||||| |||| || || | ||| | || || | || || ||||||| || || || Sbjct 81182057 CTTTCCTATATTCTTCTTTAAATCAAAGAATTCAAAGATGTCTAAATGCCAAGGCTCCAG 81181998 Query 69720 ATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGGCAGTGTT 69779 ||| || || | |||| || | || |||| | ||| || ||||| Sbjct 81181997 ATAAATAGCAAATGCTCCAGGACACTT-----------GATCCAGAGATCAAGCTGTGTT 81181949 Query 69780 ATTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACCATTTGTTCCAGAAATATA 69839 ||||| |||||||||||| | | || ||| | || || ||||| || |||| ||| || Sbjct 81181948 GTTATATACTCTCAGCATCAGTACAAGGCCACTGGAGTTGCCATTAGTCCCAGCAATGTA 81181889 Query 69840 ACTTCCTCTTGCGCGAATATTACTAATAGATAGACCTATTCCTCCTGCCATTTTAGAGAT 69899 || || | || | |||| ||| | || | ||| |||||||| || |||||| || Sbjct 81181888 GCTGCCAGTCGCCCAAATACAACTCACAGCAACACCAATTCCTCCAGCAGATTTAGAAAT 81181829 Query 69900 TAGAGCACAACGTTTCAATGTGTCATATATACCCTCTATGCTATCATCTATCATGTTAAG 69959 | ||||| | || | |||||||| ||||| || |||| |||||| |||| | || Sbjct 81181828 CAATGCACATTGCTTTAGAGTGTCATAAATACCTTCAATGCAGTCATCTTTCATACTCAG 81181769 Query 69960 AAGAAAACAGCTAGACA-TTTGATGATGTATAGTTCCCGCATTAAATAATGTAGGAGATG 70018 |||||| |||||||| | ||| | || | | || |||| || | || | || | Sbjct 81181768 AAGAAAGCAGCTAGAAAGTTTTGGGCAGT-TGATACCAACATTGAAGAGAGTTAGTGAAG 81181710 Query 70019 CGTGAGTGAACCATTTTTCAGAAAGCAGATTGT---ATGTTTCAATAGCTGATTCTATAT 70075 | ||||| ||| | | |||| ||| ||| ||| ||||||||| ||| || || | Sbjct 81181709 CATGAGTAAACAACCTCTCAGGAAGAAGACTGTCTGCTGTTTCAATCGCTACATCAATGT 81181650 Query 70076 CCCACTGATGAATTCCTATCGCGACACGCATCAACATATGCTGAGGTCGTTCTACCGTTT 70135 | | || || || | | || | ||||||||||||||| ||| ||| || || Sbjct 81181649 CTTCTTTGTGGATCCCAACAGATACTCTCATCAACATATGCTGCGGTATTTCAGCCACTT 81181590 Query 70136 TATTATTTATTTTCAA--CAGGTATGATTTTTCCAGAGTTTTAAACCCAAAATAGTTGTA 70193 | ||| || ||||| | || || || || | ||||| ||||| || ||||| Sbjct 81181589 TTCCATTGATCTTCAACTCTAATAAGACCACTCTAGCATCTTAAAACCAAAGTAATTGTA 81181530 Query 70194 TGAAAAGTCTCTTTCGTAAATAATAACAGAATTTAGTTTATCCTTATATTTG--GTAACT 70251 || || | | || | ||||| ||||||| | | | |||| |||| | ||| Sbjct 81181529 AGAGAAATTTTGGTCACAGATAATGGCAGAATTCAAGTGA-CCTT-TATTGGCCAAAACA 81181472 Query 70252 ATATCCATAACAGTAGGTGAGATAATCGGAGATCGTTTACCATTTTTAGGATTAACATAG 70311 ||||||| | | | | || ||||| |||| |||| | ||| | || || Sbjct 81181471 ATATCCAGTGCTGACTTGGCCACCATGGGAGAGTGTTTGTCATTATGTGGACTTACGCAG 81181412 Query 70312 TTGAATAAATCTTCCATTACATCACTAAATAGtttttttGTTTCCTTGTGTAAATTTGAT 70371 || | | |||||||| |||||||| || | || |||||||| ||||| || || || Sbjct 81181411 TTATAGAGGTCTTCCATCACATCACTGAACACTTCATTTGTTTCTTTGTGCAAGTTAGAG 81181352 Query 70372 ATGGCTATTCTGGCTGCTAGAATAGCATAGTCAGGATGTTGTGTAGTACAAGTAGCTGCT 70431 | | | || ||||| || ||||||||| ||| || | ||||| |||| Sbjct 81181351 ACAGTAGTCCTAGCTGCCAGGATAGCATAGACAGAGTGCTTAGTAGT-CAAG-------- 81181301 Query 70432 ATTTCCGCAGCTAACGTATCTAATTCTATAGTTGTAACTCCGTTATATAGCCCTTGAATA 70491 ||| ||||| || ||||||| ||| || | || || || || || | | || || Sbjct 81181300 ATT---GCAGCCAAAGTATCTAGTTCCATCATAGTGACCCCATTGTACAAGCACTGGATT 81181244 Query 70492 ACTTTCATGGCTATTTTGATAGGATCTATGAATTCTGTGTTCAGACCATAACATAATTTT 70551 |||||||||| || | |||||| | || || | | || |||||||| || || Sbjct 81181243 ACTTTCATGGTGATCTGAGCAGGATCAACAAAATCCATAATGAGTCCATAACA-AAGCTT 81181185 Query 70552 CT-AATACGAGATGTAATTTTATCAAACATAAC 70583 || || |||||| ||||||| ||||| || || Sbjct 81181184 CTGGATTCGAGATTTAATTTTGTCAAATATGAC 81181152 >seq2320 Length=142054208 Score = 185 bits (204), Expect = 1e-41 Identities = 372/544 (68%), Gaps = 17/544 (3%) Strand=Plus/Minus Query 39638 CCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCATTAGACCACGCTTT 39697 |||||||| || ||||| | || |||||||||||||| |||| ||| | | | || Sbjct 131601589 CCCTCATCACTGCTAATAAGGTCATTAGAAAATGTGAGGCCAGACATCATTCATTGTTTC 131601530 Query 39698 TTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTTCTACTGCTGCAAA- 39756 |||||||| ||||| |||||||| ||| || ||||| ||||||||||| ||||| Sbjct 131601529 TTGAGCCAGAATATCAATGCAAAAGAACCATAAGAGAAGGTGCCTTCTACTATGGCAAAG 131601470 Query 39757 --TGCAACAAGTCTCTCTCCGTAACTTGTATC---ATTATGTATCCACTTCTGTGCCCAA 39811 ||| ||| || ||||||| | | ||| || | ||||| | |||||| Sbjct 131601469 GCTGCCACACGT---TCTCCGTGGGTAGCATCTTTGTTCTCAATCCAACACAAGGCCCAA 131601413 Query 39812 TCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGATAATGTTTTTCA 39871 || || | |||||| ||||||||||| |||| || ||||| |||||| | | |||| Sbjct 131601412 TCTGCCTCCTTCTTGACACAAGGCATCCTTTCAATGGCATTGAAGAGAAATTCCCTTTCT 131601353 Query 39872 TCACTATCTTTAACATATGTATCTATTAACAGACTATACATTTCTGAATGGATGTTTTCA 39931 | | |||||||| |||| || | || ||| ||| ||| || |||| ||||||||| Sbjct 131601352 TTGTTGTCTTTAAC--ATGTGTCAGTAAAGAGATTATCCATGTCAGAATAGATGTTTTCC 131601295 Query 39932 ATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATTTGTACCTC-TGAACAAAA 39990 || || || || || || || || || | ||| ||| || || || || || ||| Sbjct 131601294 ATAGCAATTTGGAAGCCATAGAAGCA---GGTTTCTGTAGCCTGAACTTCTTGGAC-AAA 131601239 Query 39991 TCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGGCAAAAAATGCCAATACATG 40050 | ||| |||| ||||||| ||||| ||||||| || |||| || | || | ||| Sbjct 131601238 TTGCTCCACCAAGTTTTCATCAACTATGCCATCACATGCTACAAAGAAAGTCAGAATATG 131601179 Query 40051 TTTAATAAAATATTTTTCATCGGGTGTCAATTTATTCCAGTCATTGATATCTTTTGATAT 40110 ||||||||| || | || || ||| | ||||| | || ||||| | | Sbjct 131601178 GGATATAAAATATCTTACCTCAGGCTTCAGGGCTTCCCAGTGCTGAATGTCTTTGAACAG 131601119 Query 40111 ATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCTTTTTGTACATGTTCCATATATC 40170 || || || | || |||| || || || ||| || || || || ||||| ||||| Sbjct 131601118 GTCCACATCCTGGGCCATCCAGAAGGAAATCTTTGCTTTCTTATA-ATTTTCCAAATATC 131601060 Query 40171 ACGA 40174 | || Sbjct 131601059 ATGA 131601056 >seq1721 Length=108792865 Score = 143 bits (158), Expect = 4e-29 Identities = 106/124 (85%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 39639 CCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCATTAGACCACGCTTTT 39698 |||||||||| ||||| | ||| |||||||||||||| |||||||| || || || || | Sbjct 98462389 CCTCATCTCTGCTAATAAGTTCATTAGAAAATGTGAGGCCAGGCATCAGTCCTCGTTTCT 98462448 Query 39699 TGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTTCTACTGCTGCAAATG 39758 ||||||| ||||||| |||||||| |||||||||||||||||||| ||||| ||||| | Sbjct 98462449 TGAGCCAGAATATGGATGCAAAAGAACCAGAAAAGAAGATGCCTTCCACTGCAGCAAAGG 98462508 Query 39759 CAAC 39762 | || Sbjct 98462509 CTAC 98462512 >seq1882 Length=96796970 Score = 116 bits (128), Expect = 5e-21 Identities = 106/134 (79%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 39641 TCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCATTAGACCACGCTTTTTG 39700 |||||||| || || | ||| || ||||| |||||||| ||||| ||||| | |||||| Sbjct 92365321 TCATCTCTGCTGATGAGTTCATTGGAAAAAGTGAGTCCTGGCATAAGACCTCTCTTTTTT 92365262 Query 39701 AGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTTCTACTGCTGCAAATGCA 39760 ||||| ||||| |||||||||||||| || ||||| | |||||||| || || || || Sbjct 92365261 AGCCAGAATATAGCAGCAAAAGATCCTGAGAAGAAAACTCCTTCTACAGCAGCGAAGGCC 92365202 Query 39761 ACAAGTCTCTCTCC 39774 || | ||| || || Sbjct 92365201 ACCACTCTTTCCCC 92365188 >seq699 Length=159171411 Score = 114 bits (126), Expect = 2e-20 Identities = 223/325 (69%), Gaps = 7/325 (2%) Strand=Plus/Minus Query 39877 ATCTTTAACATATGTATCTATTAACAGACTATACATTTCTGAATGGATGTTTTCAATCGC 39936 |||||| | ||| || || || | |||||||||||||| ||||| |||||||| || || Sbjct 59758655 ATCTTTTATATAAGTGTCAATAAGGAGACTATACATTTCAGAATGTATGTTTTCCATGGC 59758596 Query 39937 CATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATTTGTACC--TCTGAACAAAATCTT 39994 || || || || || ||||| ||||| ||||| || ||| | || | |||| Sbjct 59758595 AATTTGGAAGCCATAGAAACAGTGGGCTTCTGTAATCTG-ACCTTTTTGGGCTAAATTGC 59758537 Query 39995 TCCGCCAAATTTTCATTCACTATTCCATCACTAGCGGCAAAAAATGCCAATACATGTTTA 40054 ||| |||| |||||||| |||| |||||||| || ||||| || |||| || || Sbjct 59758536 TCCACCAAGTTTTCATTTACTACGCCATCACTTGCTGCAAAGAAAGCCAGAACGTGGGAT 59758477 Query 40055 ATAAAATATTTTTCATCGGGTGTCAATTTATTCCAGTCATTGATATCTTTTGATATATCT 40114 ||||| || | || ||||| ||| | ||||| || || || || | || Sbjct 59758476 ATAAAGCATCTCTCCTCGGGCTTCAGGGATTCCCAGTGCCGAATGTCCTTGGACAGGTCC 59758417 Query 40115 ACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCTTTTTGTACATG--TTCCATATATCAC 40172 || || | | ||||| || || ||||| ||||| | |||||| | ||| ||||| Sbjct 59758416 ACCTCCTTGGTGGTCCAGAAGGAGGCCTCCGCCTTAT--TACATGTCTGCCAGATATCGT 59758359 Query 40173 GATATTGTATTGGAAAAATAACAAA 40197 | || | || | ||||| ||||| Sbjct 59758358 GGTACTTGATGGAGAAAATGACAAA 59758334 >seq1441 Length=130397257 Score = 105 bits (116), Expect = 9e-18 Identities = 124/168 (74%), Gaps = 0/168 (0%) Strand=Plus/Minus Query 70334 CACTAAATAGtttttttGTTTCCTTGTGTAAATTTGATATGGCTATTCTGGCTGCTAGAA 70393 |||| || | ||| |||||||| ||||| || || || | || || |||||||| || | Sbjct 67464198 CACTGAACACTTTCTTTGTTTCTTTGTGCAAGTTAGAGACAGCAATCCTGGCTGCCAGGA 67464139 Query 70394 TAGCATAGTCAGGATGTTGTGTAGTACAAGTAGCTGCTATTTCCGCAGCTAACGTATCTA 70453 ||||||||||||| || | ||||| | || || ||| |||| ||||| || ||||||| Sbjct 67464138 TAGCATAGTCAGGGTGCTTAGTAGTCAAGGTTGCAGCTGTTTCAGCAGCCAAAGTATCTA 67464079 Query 70454 ATTCTATAGTTGTAACTCCGTTATATAGCCCTTGAATAACTTTCATGG 70501 ||| | || || || || | || | ||||| || || ||||||| Sbjct 67464078 GTTCCACCGTGGTGACCCCACTGTACAAGCCTTGGATTACCTTCATGG 67464031 Score = 104 bits (114), Expect = 3e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 68947 GATCCATTATATGTTTCATAAGGTCCTTCCTGTTCAGCTAGTTCACAACTTGCCTCTAAT 69006 || || | ||| |||||||| ||||| | || || || || ||||| || || || | Sbjct 67485709 GAGCCCTCATAGGTTTCATATGGTCCATGCTCTTTGGCAAGGTCACAGCTGGCTTCCAGG 67485650 Query 69007 GCACCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGACTATCG 69066 || ||||||||||| ||||| || |||| |||||| | || |||||| ||| || Sbjct 67485649 GCTCCGTAATAAATAGTTTCAAAGATCTGCTTATTCAATAACTGAGCTTCTGCACTCTCA 67485590 Query 69067 AATGGATAATGTAAAAGAATAAATGCATCTGCCAATCCCTGAACCCCAATACCGATAGGT 69126 || || || | || ||||| |||||||||| || || |||||||| || || || Sbjct 67485589 AAAGGGTATCTCATCAGGATAAAAGCATCTGCCAGACCTTGTACCCCAATTCCAATGGGG 67485530 Query 69127 CTATGTCTCTTATTTGA 69143 | ||| | |||||||| Sbjct 67485529 CGATGACGTTTATTTGA 67485513 Score = 102 bits (112), Expect = 1e-16 Identities = 103/134 (77%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 69595 ACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCTGGTTCTATTT 69654 ||||||||||| || ||||| |||||||||||||| | ||| |||||||||| | | | Sbjct 67479861 ACTCGTTTCATGAAGAGATCCGGAATCCAAAGAGCAAAAAAAAGATCTCTGGCACGCTGT 67479802 Query 69655 TCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGT 69714 ||||| |||||||| || || || | ||| ||||| || | || || ||||||| || Sbjct 67479801 TCTTCTTTTCCTGTGTTCTTCTTTAAATCAAGAAATTCAAAGATGTCTAAATGCCAAGGC 67479742 Query 69715 TCTAGATATATCGC 69728 || || || || || Sbjct 67479741 TCCAGGTAAATAGC 67479728 >seq1556 Length=121768101 Score = 86.0 bits (94), Expect = 9e-12 Identities = 174/254 (69%), Gaps = 7/254 (3%) Strand=Plus/Plus Query 37348 CCTGTTGATCCAAACCCT--TGAGCTCCTCTATCTGTACCATCTAGAGATTGTACTTCAT 37405 || || || ||||| ||| ||| | ||| | ||| |||| | || ||| ||||| | Sbjct 21531332 CCAGTGGAACCAAAACCTCCTGAACCCCTTTTGGTGT--CATCCAAAGCTTGAACTTCTT 21531389 Query 37406 TCAGATCAGGATAATATA-TACGTTGATAGATTAGCTGAGCTATTCTATCGCCCGTATTT 37464 | || || ||| | | | |||| | | || ||||| || |||| ||| || | || Sbjct 21531390 CTATTTCTGGGTAAAAAAATCCGTTCACAAATGAGCTGTGCAATTCGATCACCTTTTTTG 21531449 Query 37465 ATTTTAAAATTACATTTTCCATTATTTATCAGAATGACTCCAATATTCCCCCTATAATCT 37524 | || ||| || ||| ||| ||| | ||| | || |||| ||| || ||||||||| Sbjct 21531450 ACTTCAAACTTTTCTTTGCCAAAATTAAGCAGTACAACACCAACATTTCCTCTATAATCT 21531509 Query 37525 TCATCGATTACTCCGCCTCCTACATCAAT--ACCTTTTAGAGACAAACCCGATCTAGGAG 37582 ||||| || || || | ||||||||||| | ||| || ||| || || | |||| Sbjct 21531510 TCATCTATGACACCAGCACCTACATCAATGAAGTGTTTGCAGCCAAGCCAGACCGTGGAG 21531569 Query 37583 CTATTCTTCCATAA 37596 | | |||||||||| Sbjct 21531570 CCACTCTTCCATAA 21531583 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686786830756200