Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Callithrix_20jacchus_20[refseq_20GCF_5F000004665.1_202010-01-22] 14,205 sequences; 2,914,958,544 total letters Query= NC_028379.1 Length=205896 Score E Sequences producing significant alignments: (Bits) Value seq1334 91.5 2e-13 >seq1334 Length=132174527 Score = 91.5 bits (100), Expect = 2e-13 Identities = 187/275 (68%), Gaps = 10/275 (4%) Strand=Plus/Plus Query 14277 GACACGTACAGCCCCGACGAGCACCTGTGGGCCACCGTGCAGAGAATGTACGG--GACGC 14334 ||||| ||||||||||| || ||||| ||||||||| | ||| | || |||| || || Sbjct 1924034 GACACCTACAGCCCCGATGAACACCTCTGGGCCACCCTTCAGCG--TGCACGGTGGATGC 1924091 Query 14335 CCGGGGGGATCCCCGTTCACGTCAAGTACGACACCTCGGACATGTGGGCCAAGGTCAGGT 14394 | || | ||| ||| ||||||||||| ||| |||||| | | | |||| Sbjct 1924092 CGGGCTCTGTTCCCCACCACCGCAAGTACGACATCTCAGACATGATTTCTATTGCCAGGC 1924151 Query 14395 TCGTCAAGTGGCACTACTACGAGGGGGATATCAAGAAAGGGGCCCTGTACCCGCCTTGCG 14454 | ||||||||||| ||||||| || |||| | || |||| ||| |||||| Sbjct 1924152 TGGTCAAGTGGCAGGGTCACGAGGGAGACATCAGTCAGGGTGCCCCTTACGGCCCTTGCT 1924211 Query 14455 ACGGCATCCACGTCCACGCCATCTGCATCTTCGGGTCCGGCGACGTGAAGTGG---CTGA 14511 || |||||| | || ||||| | | ||| |||| ||| || | ||| || Sbjct 1924212 CTGGAATCCACCAGCGGGCGATCTGTGTGTATGGGGCCGGGGACTTGCACTGGATTCTTC 1924271 Query 14512 AGAGCGTCCCGCACCTGTTCGCCAACAAGTTCGAC 14546 | | || |||||||| ||||||||||| ||| Sbjct 1924272 AAA---ACCATCACCTGTTGGCCAACAAGTTTGAC 1924303 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658622232620800