Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Carlito_20syrichta_20[refseq_20GCF_5F000164805.1_202013-09-18] 337,189 sequences; 3,453,864,774 total letters Query= NC_001416.1 Length=48502 Score E Sequences producing significant alignments: (Bits) Value seq126817 255 2e-63 >seq126817 Length=212660 Score = 255 bits (282), Expect = 2e-63 Identities = 196/231 (85%), Gaps = 1/231 (0%) Strand=Plus/Minus Query 25881 TCATTCGAAGCAGATATTTCTGGATATTGTCATAAAACAATTTAGTGAATTTATCATCGT 25940 ||||||||||||||||||| |||||||||||||||||||||| |||||||||||| |||| Sbjct 165209 TCATTCGAAGCAGATATTTGTGGATATTGTCATAAAACAATT-AGTGAATTTATCCTCGT 165151 Query 25941 CCACTTGAATCTGTGGTTCATTACGTCTTAACTCTTCATATTTAGAAATGAGGCTGATGA 26000 ||| |||||||||| ||| ||||| ||| ||||||||| |||||||||||||| |||| Sbjct 165150 CCAGGAGAATCTGTGGGTCACTACGTGTTACCTCTTCATACTTAGAAATGAGGCTTATGA 165091 Query 26001 GTTCCATATTTGAAAAGTTTTCATCACTACTTAGTTTTTTGATAGCTTCAAGCCAGAGTT 26060 ||||||||||||| |||||||||||| || ||| || || |||||||||||| |||||| Sbjct 165090 GTTCCATATTTGATAAGTTTTCATCAGTAATTATTTGTTCGATAGCTTCAAGTCAGAGTC 165031 Query 26061 GTCTTTTTCTATCTACTCTCATACAACCAATAAATGCTGAAATGAATTCTA 26111 || || ||| |||| |||| || ||||| |||| || | || ||||| Sbjct 165030 CTCGGATTATATATACTTTCATCCACCCAATTAATGTTGCAGAGATTTCTA 164980 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 154463821947552