Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Carlito_20syrichta_20[refseq_20GCF_5F000164805.1_202013-09-18] 337,189 sequences; 3,453,864,774 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq314221 282 5e-71 seq301931 178 2e-39 seq314877 159 4e-34 seq306503 114 2e-20 >seq314221 Length=960332 Score = 282 bits (312), Expect = 5e-71 Identities = 609/899 (68%), Gaps = 15/899 (2%) Strand=Plus/Plus Query 9472 CCCGCCCTGTATCTGCTTGTGTTTCTCTTTGGGTTGTTGGGCAATATCTTAGTGGTGATT 9531 ||| | |||||| || ||||| || |||| | |||||||| | | |||||| | Sbjct 30908 CCCCCGCTGTATGCCCTGGTGTTCATCATTGGTCTCCTGGGCAATGTGGTGGTGGTGGTG 30967 Query 9532 ATTGTCATAAGATACATGAAGATCAAAAACCTCACTAACATGTTACTGTTAAACTTGGCA 9591 || | | || ||||| | | || || | || ||||| | ||| | |||||||| Sbjct 30968 ATCCTTACAAAATACAGAAGGCTCCGAATTATGACCAACATCTACCTGCTCAACTTGGCC 31027 Query 9592 ATATCTGACTTGCTATTTCTTTTAACTTTGCCATTTTGGATGCACTATATTGGAATGTAT 9651 || || |||||||| || || || ||| | || || ||||| ||| | | || Sbjct 31028 ATTTCCGACTTGCTCTTCCTCTTCACTCTCCCGTTCTGGATTCACAGCCTC---ACGTGG 31084 Query 9652 CATGATTGGACTTTTGGTATTTCCCTGTGTAAACTGCTCAGGGGTGTGTGTTACATGTCA 9711 |||| ||| ||||||| || | ||||||| || | | ||| | | |||| || Sbjct 31085 GATGAGTGGGTTTTTGGTCATTGCATGTGTAAGCTCTTGATGGGGCTTTATTACCTGGGC 31144 Query 9712 CTGTACAGCCAGGTCTTTTGCATCATCCTGCTAACAGTAGACAGGTATCTAGCTGTTGTC 9771 ||||||| || |||||| |||||||||||| || | |||||||| || || | ||| Sbjct 31145 TTGTACAGTGAGATCTTTTTCATCATCCTGCTGACCATTGACAGGTACCTGGCGATCGTC 31204 Query 9772 TATGCTGTAACTGCTTTGAGGTTTAGAACAGTAACCTGTGGCATAGTTACCTGTGTATGT 9831 | ||||| ||| | | | || || || | ||| || | ||| |||| Sbjct 31205 CACGCTGTGTTTGCCCTTCGAACCCGGACTGTCACTTTTGGTATCATAACCAGTGTCATC 31264 Query 9832 ACCTGGTTTCTGGCAGGGTTGTTGTCCCTCCCTGAATTTTTCTTTCATGGACACCAAGAT 9891 |||||| |||||||| | | || ||||||||| |||| || | | || ||| Sbjct 31265 ACCTGGGGCTTGGCAGGGCTAGCAGCACTTCCTGAATTTATCTTCCACGAAGTCCCAGAG 31324 Query 9892 GACAATGGTAGGGTTCAGTGTGATCCTTACTACCCAGAG-ATGTCTACAA-ATGTTTGGA 9949 || ||| || | | || |||| ||||||||| ||| |||| | |||| Sbjct 31325 GAGTATGACAGTTCTGAATGCAATCCCGCTTACCCAGAGGATGA--ACAAGACAGCTGGA 31382 Query 9950 GGCGCGCCCACGT--TGCAAAGGTGATTATGTTAAGTCTCATTTTGCCTCTGCTCATTAT 10007 ||||| || || ||| || || | || | | || |||||||| || Sbjct 31383 AAAATTTCCACGCCCTGAGAA--TGAACATCTTGGGCCTTGCTCTCCCCCTGCTCATCAT 31440 Query 10008 GGCTGTCTGCTACTATGTAATTATCAGAAGACTGTTGAGGCGCCCCAGCAAGAAGAAGTA 10067 || ||||||||||| | ||| |||| || ||| |||| ||| | || || ||||| Sbjct 31441 GGTTGTCTGCTACTCAGGAATCATCAAAACGCTGCTGAGATGCCGTAATAAAAAAAAGTA 31500 Query 10068 CAAGGCCATCAGGCTCATCTTTGTCATCATGGTGGCCTATTTTGTTTTTTGGACACCCTA 10127 |||||||||||||||||| ||||| |||||||||| || ||| |||| ||||||||||| Sbjct 31501 CAAGGCCATCAGGCTCATTTTTGTTATCATGGTGGTCTTTTTCATTTTCTGGACACCCTA 31560 Query 10128 CAACATTGTTCTCCTACTGTCTACCTTTCACGCAACCCTTCTTAACCTGCAG-TGTGCAT 10186 |||| | |||||||| |||||| | || || | | ||||| ||| |||| Sbjct 31561 CAACCTGGTTCTCCTTCTGTCTGCTTTCCAAATTA-CGTTCTTTGGGAACAGCTGTGACC 31619 Query 10187 TGAGCAGTAACTTGGACATGGCTCTGCTGATAACAAAAACAGTAGCCTACACACACTGTT 10246 ||||| | |||||||||| || | | ||| | | |||||||||||||| | Sbjct 31620 GGAGCAAAGATCTGGACATGGCCAAGCAGGTTACAGAGGTGATCGCCTACACACACTGCT 31679 Query 10247 GCATCAACCCAGTGATCTACGCGTTCGTGGGGGAGAAGTT-TAGAAGACACCTGTACCAC 10305 || |||||||||||||||| || |||||||| || | ||| ||||| |||||| |||| Sbjct 31680 GCGTCAACCCAGTGATCTATGCCTTCGTGGGTGAAAGGTTCCAGAAG-CACCTGCGCCAC 31738 Query 10306 TTCTTCCACACCTACGTGGCCATCTACCTCTGCAAGTACATCCCCTTCCTGTCTGGTGA 10364 || ||||| | | |||||||| |||| ||| |||||||| || || ||||||| Sbjct 31739 TTTTTCCAAAAACATGTGGCCATGCACCTGAGCAGATACATCCCATTTCTTCCTGGTGA 31797 Score = 282 bits (312), Expect = 5e-71 Identities = 609/899 (68%), Gaps = 15/899 (2%) Strand=Plus/Plus Query 176358 CCCGCCCTGTATCTGCTTGTGTTTCTCTTTGGGTTGTTGGGCAATATCTTAGTGGTGATT 176417 ||| | |||||| || ||||| || |||| | |||||||| | | |||||| | Sbjct 30908 CCCCCGCTGTATGCCCTGGTGTTCATCATTGGTCTCCTGGGCAATGTGGTGGTGGTGGTG 30967 Query 176418 ATTGTCATAAGATACATGAAGATCAAAAACCTCACTAACATGTTACTGTTAAACTTGGCA 176477 || | | || ||||| | | || || | || ||||| | ||| | |||||||| Sbjct 30968 ATCCTTACAAAATACAGAAGGCTCCGAATTATGACCAACATCTACCTGCTCAACTTGGCC 31027 Query 176478 ATATCTGACTTGCTATTTCTTTTAACTTTGCCATTTTGGATGCACTATATTGGAATGTAT 176537 || || |||||||| || || || ||| | || || ||||| ||| | | || Sbjct 31028 ATTTCCGACTTGCTCTTCCTCTTCACTCTCCCGTTCTGGATTCACAGCCTC---ACGTGG 31084 Query 176538 CATGATTGGACTTTTGGTATTTCCCTGTGTAAACTGCTCAGGGGTGTGTGTTACATGTCA 176597 |||| ||| ||||||| || | ||||||| || | | ||| | | |||| || Sbjct 31085 GATGAGTGGGTTTTTGGTCATTGCATGTGTAAGCTCTTGATGGGGCTTTATTACCTGGGC 31144 Query 176598 CTGTACAGCCAGGTCTTTTGCATCATCCTGCTAACAGTAGACAGGTATCTAGCTGTTGTC 176657 ||||||| || |||||| |||||||||||| || | |||||||| || || | ||| Sbjct 31145 TTGTACAGTGAGATCTTTTTCATCATCCTGCTGACCATTGACAGGTACCTGGCGATCGTC 31204 Query 176658 TATGCTGTAACTGCTTTGAGGTTTAGAACAGTAACCTGTGGCATAGTTACCTGTGTATGT 176717 | ||||| ||| | | | || || || | ||| || | ||| |||| Sbjct 31205 CACGCTGTGTTTGCCCTTCGAACCCGGACTGTCACTTTTGGTATCATAACCAGTGTCATC 31264 Query 176718 ACCTGGTTTCTGGCAGGGTTGTTGTCCCTCCCTGAATTTTTCTTTCATGGACACCAAGAT 176777 |||||| |||||||| | | || ||||||||| |||| || | | || ||| Sbjct 31265 ACCTGGGGCTTGGCAGGGCTAGCAGCACTTCCTGAATTTATCTTCCACGAAGTCCCAGAG 31324 Query 176778 GACAATGGTAGGGTTCAGTGTGATCCTTACTACCCAGAG-ATGTCTACAA-ATGTTTGGA 176835 || ||| || | | || |||| ||||||||| ||| |||| | |||| Sbjct 31325 GAGTATGACAGTTCTGAATGCAATCCCGCTTACCCAGAGGATGA--ACAAGACAGCTGGA 31382 Query 176836 GGCGCGCCCACGT--TGCAAAGGTGATTATGTTAAGTCTCATTTTGCCTCTGCTCATTAT 176893 ||||| || || ||| || || | || | | || |||||||| || Sbjct 31383 AAAATTTCCACGCCCTGAGAA--TGAACATCTTGGGCCTTGCTCTCCCCCTGCTCATCAT 31440 Query 176894 GGCTGTCTGCTACTATGTAATTATCAGAAGACTGTTGAGGCGCCCCAGCAAGAAGAAGTA 176953 || ||||||||||| | ||| |||| || ||| |||| ||| | || || ||||| Sbjct 31441 GGTTGTCTGCTACTCAGGAATCATCAAAACGCTGCTGAGATGCCGTAATAAAAAAAAGTA 31500 Query 176954 CAAGGCCATCAGGCTCATCTTTGTCATCATGGTGGCCTATTTTGTTTTTTGGACACCCTA 177013 |||||||||||||||||| ||||| |||||||||| || ||| |||| ||||||||||| Sbjct 31501 CAAGGCCATCAGGCTCATTTTTGTTATCATGGTGGTCTTTTTCATTTTCTGGACACCCTA 31560 Query 177014 CAACATTGTTCTCCTACTGTCTACCTTTCACGCAACCCTTCTTAACCTGCAG-TGTGCAT 177072 |||| | |||||||| |||||| | || || | | ||||| ||| |||| Sbjct 31561 CAACCTGGTTCTCCTTCTGTCTGCTTTCCAAATTA-CGTTCTTTGGGAACAGCTGTGACC 31619 Query 177073 TGAGCAGTAACTTGGACATGGCTCTGCTGATAACAAAAACAGTAGCCTACACACACTGTT 177132 ||||| | |||||||||| || | | ||| | | |||||||||||||| | Sbjct 31620 GGAGCAAAGATCTGGACATGGCCAAGCAGGTTACAGAGGTGATCGCCTACACACACTGCT 31679 Query 177133 GCATCAACCCAGTGATCTACGCGTTCGTGGGGGAGAAGTT-TAGAAGACACCTGTACCAC 177191 || |||||||||||||||| || |||||||| || | ||| ||||| |||||| |||| Sbjct 31680 GCGTCAACCCAGTGATCTATGCCTTCGTGGGTGAAAGGTTCCAGAAG-CACCTGCGCCAC 31738 Query 177192 TTCTTCCACACCTACGTGGCCATCTACCTCTGCAAGTACATCCCCTTCCTGTCTGGTGA 177250 || ||||| | | |||||||| |||| ||| |||||||| || || ||||||| Sbjct 31739 TTTTTCCAAAAACATGTGGCCATGCACCTGAGCAGATACATCCCATTTCTTCCTGGTGA 31797 >seq301931 Length=702487 Score = 178 bits (196), Expect = 2e-39 Identities = 134/157 (85%), Gaps = 3/157 (2%) Strand=Plus/Minus Query 138082 CAGCGCCTCAGCCTCACCCTGAGGGTTTTGAGCTTTTCCCCCAGGGAGTTCACTTTATCC 138141 ||||||| |||||||| ||||||||| || ||||||||||||||||||||||| | ||| Sbjct 128712 CAGCGCCGCAGCCTCATCCTGAGGGTCTTCAGCTTTTCCCCCAGGGAGTTCACGTGCTCC 128653 Query 138142 TTTTCCTGGTCGGTGCTGTGGTTCTCGGCCTGGGGCATCACCTCCTCCAGGTAAAACTGG 138201 || | ||| | | |||||||| || |||||||||||||||||||||||||||||| Sbjct 128652 TTGAC---GTCTGGGTCATGGTTCTCAGCTTGGGGCATCACCTCCTCCAGGTAAAACTGG 128596 Query 138202 ATCATCTCAGACAGGGCCTGGCAGCCCAGGTAACCCT 138238 |||||||| |||| ||| ||||| ||||||||||||| Sbjct 128595 ATCATCTCGGACAAGGCTTGGCAACCCAGGTAACCCT 128559 Score = 113 bits (124), Expect = 5e-20 Identities = 82/95 (86%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 137922 TCAGTTTTTCATCTTTGTGGTCATGTAGGCCTCTATGTAGTTAATGAAGATGTCAAACTC 137981 ||||||||| |||| | ||||||||||| ||||||||||| ||||||||||||||||| Sbjct 131156 TCAGTTTTTTGTCTTCATTGTCATGTAGGCTTCTATGTAGTTGATGAAGATGTCAAACTC 131097 Query 137982 GCTCATGGCCTTGTAGACCCCTTTTTCCTGGAGCT 138016 |||||||| |||||||| |||| || ||||||| Sbjct 131096 ACTCATGGCTTTGTAGACGCCTTGCTCTTGGAGCT 131062 >seq314877 Length=772221 Score = 159 bits (176), Expect = 4e-34 Identities = 132/161 (82%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 145750 AGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGC 145809 ||||| |||| ||| |||| |||||| || ||||||| |||||||| |||||||| || Sbjct 564768 AGGCCTGTGATGTGTGCGATCATGTATGTGAGCAGGGCATAGCTGGCGATGTTGAAAGGT 564827 Query 145810 ACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCCCGCC 145869 || ||||| |||||||| || || | |||||||||||||||||| ||||| ||| | || Sbjct 564828 ACACCCAGGCCCATGTCTCCTGACCTCTGGTACAGCTGGCAGGACAGCTCACCGTTCACC 564887 Query 145870 ACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCAT 145910 |||||||||||||| ||| ||||| || ||||| ||||| Sbjct 564888 ACGTAGAACTGGCAGAGGGCATGGCATGGAGGCAGCGCCAT 564928 >seq306503 Length=59306 Score = 114 bits (126), Expect = 2e-20 Identities = 253/377 (67%), Gaps = 2/377 (1%) Strand=Plus/Minus Query 176869 GTCTCATTTTGCCTCTGCTCATTATGGCTGTCTGCTACTATGTAATTATCAGAAGACTGT 176928 |||| ||||||||||| | | ||| |||||||| | ||||| || | ||| Sbjct 27867 GTCTGGTTTTGCCTCTGTTGGTCATGATCATCTGCTACACGGGGATTATAAGGATTCTGC 27808 Query 176929 TGAGGCGCCCCAGCAAGAAGAAGTACAAGGCCATCAGGCTCATCTTTGTCATCATGGTGG 176988 | || || |||| | ||||||| | ||| || | | || || |||| ||||||| | Sbjct 27807 TCAGACGACCCAACGAGAAGAAATCCAAAGCTGTTCGCCTGATTTTTGCCATCATGTTCA 27748 Query 176989 CCTATTTTGTTTTTTGGACACCCTACAACATTGTTCTCCTACTGTCTACCTTTCACGCAA 177048 || ||| | |||||||| |||||||| | | | || | ||| || || | || Sbjct 27747 TCTTCTTTCTCTTTTGGACCCCCTACAATCTGACTTTACTGATTTCTGTTTTCCAAG-AA 27689 Query 177049 CCCTTCTTAACCTG-CAGTGTGCATTGAGCAGTAACTTGGACATGGCTCTGCTGATAACA 177107 ||| || ||| | ||||||| |||| | | ||||| |||| |||| | | ||| Sbjct 27688 GTCTTGTTCACCCGTCAGTGTGAGCAGAGCCGCCATCTGGACCTGGCCCTGCAGGTGACA 27629 Query 177108 AAAACAGTAGCCTACACACACTGTTGCATCAACCCAGTGATCTACGCGTTCGTGGGGGAG 177167 | | |||||||| ||||| || ||||||||||||||||||| || || || ||| Sbjct 27628 GAGGTGATCGCCTACACGCACTGCTGTCTCAACCCAGTGATCTACGCTTTTGTTGGCGAG 27569 Query 177168 AAGTTTAGAAGACACCTGTACCACTTCTTCCACACCTACGTGGCCATCTACCTCTGCAAG 177227 | ||| | | ||||| |||| | ||||||| | ||||| | ||| ||| Sbjct 27568 AGGTTCCGGAAGTACCTGCACCAGCTGTTCCACAGGCATGTGGCTGTGCGCCTGGCTAAG 27509 Query 177228 TACATCCCCTTCCTGTC 177244 | |||||||||| || Sbjct 27508 TGGCTCCCCTTCCTCTC 27492 Score = 114 bits (126), Expect = 2e-20 Identities = 253/377 (67%), Gaps = 2/377 (1%) Strand=Plus/Minus Query 9983 GTCTCATTTTGCCTCTGCTCATTATGGCTGTCTGCTACTATGTAATTATCAGAAGACTGT 10042 |||| ||||||||||| | | ||| |||||||| | ||||| || | ||| Sbjct 27867 GTCTGGTTTTGCCTCTGTTGGTCATGATCATCTGCTACACGGGGATTATAAGGATTCTGC 27808 Query 10043 TGAGGCGCCCCAGCAAGAAGAAGTACAAGGCCATCAGGCTCATCTTTGTCATCATGGTGG 10102 | || || |||| | ||||||| | ||| || | | || || |||| ||||||| | Sbjct 27807 TCAGACGACCCAACGAGAAGAAATCCAAAGCTGTTCGCCTGATTTTTGCCATCATGTTCA 27748 Query 10103 CCTATTTTGTTTTTTGGACACCCTACAACATTGTTCTCCTACTGTCTACCTTTCACGCAA 10162 || ||| | |||||||| |||||||| | | | || | ||| || || | || Sbjct 27747 TCTTCTTTCTCTTTTGGACCCCCTACAATCTGACTTTACTGATTTCTGTTTTCCAAG-AA 27689 Query 10163 CCCTTCTTAACCTG-CAGTGTGCATTGAGCAGTAACTTGGACATGGCTCTGCTGATAACA 10221 ||| || ||| | ||||||| |||| | | ||||| |||| |||| | | ||| Sbjct 27688 GTCTTGTTCACCCGTCAGTGTGAGCAGAGCCGCCATCTGGACCTGGCCCTGCAGGTGACA 27629 Query 10222 AAAACAGTAGCCTACACACACTGTTGCATCAACCCAGTGATCTACGCGTTCGTGGGGGAG 10281 | | |||||||| ||||| || ||||||||||||||||||| || || || ||| Sbjct 27628 GAGGTGATCGCCTACACGCACTGCTGTCTCAACCCAGTGATCTACGCTTTTGTTGGCGAG 27569 Query 10282 AAGTTTAGAAGACACCTGTACCACTTCTTCCACACCTACGTGGCCATCTACCTCTGCAAG 10341 | ||| | | ||||| |||| | ||||||| | ||||| | ||| ||| Sbjct 27568 AGGTTCCGGAAGTACCTGCACCAGCTGTTCCACAGGCATGTGGCTGTGCGCCTGGCTAAG 27509 Query 10342 TACATCCCCTTCCTGTC 10358 | |||||||||| || Sbjct 27508 TGGCTCCCCTTCCTCTC 27492 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 587589707423560