Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Carlito_20syrichta_20[refseq_20GCF_5F000164805.1_202013-09-18] 337,189 sequences; 3,453,864,774 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq130668 118 7e-22 seq305757 107 1e-18 seq316040 105 4e-18 seq314340 104 2e-17 seq169768 98.7 6e-16 seq100879 98.7 6e-16 seq311794 91.5 9e-14 seq302728 91.5 9e-14 seq306752 87.8 1e-12 seq303727 87.8 1e-12 seq314311 84.2 1e-11 seq126465 82.4 5e-11 >seq130668 Length=27386 Score = 118 bits (130), Expect = 7e-22 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || | ||| | |||||||||||| | || |||||||| ||||||||||| ||| Sbjct 9816 CCCCCTCTCAGACGCAGCACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGAC 9757 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || || |||| |||| ||| ||||| || || || |||| ||||||||| || Sbjct 9756 AGGGTGCGCCCGTCTTCCAGCTGTTTGCCGGCAAAGATCAGCCTCTGCTGGTCAGGAGGG 9697 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || ||||||||| |||||| ||| | | | || | ||| | | ||||| Sbjct 9696 ATGCCCTCCTTGTCCTGGATCTTTGCCTTGACGTTCTCAATGGTGTCGCTGGGCTCGACC 9637 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390 |||| |||||||| || || || || || ||||| |||||||||||| Sbjct 9636 TCCAGGGTGATGGTCTTCCCAGTCAGGGTCTTCACGAAGATCTGCATC 9589 Score = 113 bits (124), Expect = 3e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || | ||| | |||||||||||| | || |||||||| ||||||||||| ||| Sbjct 9588 CCCCCTCTCAGACGCAGCACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGAC 9529 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || || |||| |||| ||| ||||| || || || |||| ||||||||| || Sbjct 9528 AGGGTGCGCCCGTCTTCCAGCTGTTTGCCGGCAAAGATCAGCCTCTGCTGGTCAGGAGGG 9469 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || |||||||| |||||| ||| | | | || | ||| | | ||||| Sbjct 9468 ATGCCTTCCTTGTCCTGGATCTTTGCCTTGACGTTCTCAATGGTGTCGCTGGGCTCGACC 9409 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 |||| |||||||| || || || || || ||||| ||||||||||| Sbjct 9408 TCCAGGGTGATGGTCTTCCCAGTCAGGGTCTTCACGAAGATCTGCAT 9362 Score = 98.7 bits (108), Expect = 6e-16 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258 |||||||| ||||||||||| ||||| || | || |||| ||| ||||| || || Sbjct 10008 TCTTTCTGGATGTTGTAGTCAGACAGGGTGCGTCCATCTTCCAGCTGTTTGCCGGCAAAG 9949 Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCG 34318 || |||| ||||||||| || | || |||||||| |||||| ||| | | Sbjct 9948 ATCAGCCTCTGCTGGTCAGGAGGGATGCCTTCCTTGTCCTGGATCTTTGCCTTGACGTTC 9889 Query 34319 GCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACA 34378 | || | ||| | | ||||| |||| |||||||| || || || || || ||||| Sbjct 9888 TCAATGGTGTCGCTGGGCTCGACCTCCAGGGTGATGGTCTTCCCAGTCAGGGTCTTCACG 9829 Query 34379 AAGATCTGCATC 34390 |||||||||||| Sbjct 9828 AAGATCTGCATC 9817 >seq305757 Length=1147529 Score = 107 bits (118), Expect = 1e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || | ||| | ||| |||||||| | || |||||||| |||||||| || || Sbjct 1142244 CCACCTCTCAGACGCAGGACCAGGTGCAGGGTTGACTCTTTCTGGATGTTGTAATCAGAA 1142185 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || ||| | || |||| |||||||||||| || ||||||| ||||||||| || Sbjct 1142184 AGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGAGGG 1142125 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || || || || ||||| ||| | || | || | ||| | | || || Sbjct 1142124 ATGCCTTCTTTATCCTGGATCTTGGCCTTCACATTCTCGATGGTATCACTGGGCTCAACC 1142065 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | |||||||| |||||||| || |||||||| ||||||||||| Sbjct 1142064 TCTAGGGTGATGGTCTTGCCGGTCAGGGTTTTCACGAAGATCTGCAT 1142018 >seq316040 Length=1005281 Score = 105 bits (116), Expect = 4e-18 Identities = 164/232 (71%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || ||||| | |||||||||||| | || |||||||| ||||||||||| || Sbjct 910480 CCACCTCGCAGGCGCAGCACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCTGAA 910421 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || ||| | || |||| ||| ||||| || || || || ||||||||||| || Sbjct 910420 AGAGTGCGGCCATCCTCCAGCTGTTTGCCCGCAAATATCAGACGCTGCTGGTCAGGTGGA 910361 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTT-AGATCGGCTATCGAATCGGTCGATTCGAC 34341 | || ||||||||| || ||| ||||| | || | || | || | | || || Sbjct 910360 ATGCCCTCCTTGTCTTGGAT-TTTAGCTTTGACATTCTCGATGGTGTCACTGGGCTCCAC 910302 Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATCGCT 34393 || | ||||| || ||||| ||||| || |||| |||||||||||| || Sbjct 910301 TTCAAGGGTGATTGTCTTGCCCGTGAGGGTCTTCATGAAGATCTGCATCTCT 910250 >seq314340 Length=1169179 Score = 104 bits (114), Expect = 2e-17 Identities = 162/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || ||||| | |||||||||||| | || |||||||| ||||||||||| || Sbjct 629759 CCACCTCGCAGGCGCAGCACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCTGAA 629700 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || | | | || |||| ||| ||||| || || || || ||||||||||| || Sbjct 629699 AGAGTGCAGCCATCCTCCAGCTGTTTGCCCGCAAATATCAGACGCTGCTGGTCAGGTGGG 629640 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTT-AGATCGGCTATCGAATCGGTCGATTCGAC 34341 | || ||||||||| || || ||||| | || |||| | || | | || || Sbjct 629639 ATGCCCTCCTTGTCTTGGAT-TTCAGCTTTGACATTCTCTATGGTGTCACTGGGCTCAAC 629581 Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390 || | ||||| || ||||| ||||| || ||||| |||||||||||| Sbjct 629580 TTCAAGGGTGATTGTCTTGCCCGTGAGGGTCTTCACGAAGATCTGCATC 629532 >seq169768 Length=302843 Score = 98.7 bits (108), Expect = 6e-16 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 || |||||||| | || |||||||| |||||||| || || || | | | || Sbjct 108916 AGGACCAGGTGCAGGGTTGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCAGCCATCT 108975 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297 |||| |||||||||||| ||||||||| ||||||||||| || | || || || || Sbjct 108976 TCCAGCTGCTTGCCTGCAGAAATGAGCCTCTGCTGGTCGAGAGGGATGCCTTCTTTATCA 109035 Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357 ||||| ||| | || | || | ||| | | || || | | |||||||| Sbjct 109036 TGGATCTTGGCCTTCACATTCTCAATGGTATCACTGGGCTCAACCTGTAGGGTGATGGTC 109095 Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 |||| ||| || |||||||| ||||||||||| Sbjct 109096 TTGCTGGTCAGGGTTTTCACGAAGATCTGCAT 109127 >seq100879 Length=438 Score = 98.7 bits (108), Expect = 6e-16 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 || |||||||| | || |||||||| |||||||| || || || ||| | || Sbjct 223 AGAACCAGGTGCAGGGTCGACTCTTTCTGAATGTTGTAATCAGAAAGAGTGCGGCCATCT 282 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297 |||| |||||||||||| || ||||||| ||||||||| || | || || || || Sbjct 283 TCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGAGGGATGCCTTCTTTATCC 342 Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357 ||||| ||| | || | || | ||| | | || || || | |||||||| Sbjct 343 TGGATCTTGGCCTTCACATTCTCGATGGTATCACTGGGCTCAACTTCTAGGGTGATGGTC 402 Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 |||||||| || || |||||||| |||||||| Sbjct 403 TTGCCGGTCAGGGTCTTCACAAAAATCTGCAT 434 >seq311794 Length=553708 Score = 91.5 bits (100), Expect = 9e-14 Identities = 148/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 34177 CAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTC 34236 ||| |||| ||| | ||| ||||||||| |||||| ||| |||| ||| | || Sbjct 171113 CAGGACCAAGTGCAGGGTAGATTCTTTCTGGATGTTGAAGTTATACAGAGTACGTCCATC 171172 Query 34237 GTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTC 34296 |||||||| |||| || || || | || ||||||||| || | || |||||||| Sbjct 171173 TTCCAACTGTTTGCTGGCAAAGATCAACCTCTGCTGGTCAGGAGGGATGCCTTCCTTGTC 171232 Query 34297 GGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGT 34356 |||||| ||| | || | || | | | | | ||||| |||| |||||||| Sbjct 171233 TTGGATCTTTGCCTTGACATTCTCAATGGCGTTGCTGGGCTCGACCTCCAGGGTGATGGT 171292 Query 34357 TTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 | ||| || || || ||||||||||| ||||| Sbjct 171293 CTGGCCAGTCAGGGTCTTCACAAAGATTTGCAT 171325 >seq302728 Length=1132070 Score = 91.5 bits (100), Expect = 9e-14 Identities = 161/232 (69%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || | ||| | |||||||||||| | || ||||| || |||||||| || || Sbjct 600825 CCACCTCTCAGGCACAGCACCAGGTGCAGGGTGGACTCTTTGTGGATGTTGTATTCTGAA 600884 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || || | || |||| ||| |||||||| || || || ||||||||||| || Sbjct 600885 AGAGTGCGACCATCCTCCAGCTGTTTGCCTGCAAATATCAGACGCTGCTGGTCAGGTGGG 600944 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTT-AGATCGGCTATCGAATCGGTCGATTCGAC 34341 | || ||||||||| || ||| ||||| | || | || | || | | || || Sbjct 600945 ATGCCCTCCTTGTCTTGGAT-TTTAGCTTTGACATTCTCGATGGTGTCACTGGGCTCAAC 601003 Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATCGCT 34393 || | ||||| || ||||| ||||| || ||||| ||||||||| || || Sbjct 601004 TTCAAGGGTGATTGTCTTGCCTGTGAGGGTCTTCACGAAGATCTGCCTCTCT 601055 >seq306752 Length=244776 Score = 87.8 bits (96), Expect = 1e-12 Identities = 151/217 (70%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 34175 CTCAGCACCAGGTGTAAAGTAC-TTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTC 34233 |||||||| || || | |||| ||||||| || ||||||||||| ||||| | | | Sbjct 147182 CTCAGCACAAGATGAAGAGTAGATTTCTTT-TGAATGTTGTAGTCAGACAGAGTATGTCC 147124 Query 34234 GTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTT 34293 || |||| |||||||| || || || || | |||||||| || | | ||||| Sbjct 147123 ATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGGTCAGGAGGAATTCCTTCCTT 147064 Query 34294 GTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGAT 34353 || ||||| ||||| || |||| | ||| | | ||| || || | ||||| Sbjct 147063 ATCCTGGATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTCAACCTCGAGAGTGAT 147004 Query 34354 GGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390 ||| || || || || ||||||| || ||||||||| Sbjct 147003 GGTCTTCCCCGTAAGGGTTTTCATGAAAATCTGCATC 146967 >seq303727 Length=1188818 Score = 87.8 bits (96), Expect = 1e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || || || |||| ||| || || | |||| ||| || || ||||||||||| ||| Sbjct 949510 CCACCACGAAGTCTCAACACAAGATGAAGAGTAGATTCCTTTTGAATGTTGTAGTCAGAC 949451 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || ||| | || |||| |||||||| || || || || | ||||| || || Sbjct 949450 AGAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGA 949391 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | | ||||| || ||||| ||||| || |||| | ||| | | ||| || Sbjct 949390 ATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTCAACC 949331 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390 || | |||||||| || || || || ||||||| || ||||||||| Sbjct 949330 TCGAGGGTGATGGTCTTCCCCGTAAGGGTTTTCATGAAAATCTGCATC 949283 >seq314311 Length=485322 Score = 84.2 bits (92), Expect = 1e-11 Identities = 156/228 (68%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 ||||| ||||| ||||||||||| | || || ||||||| ||||||||||| || Sbjct 408777 CCGCCTCGCAGGTACAGCACCAGGTACAGGGTGCT--CTTTCTGGATGTTGTAGTCTGAG 408834 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || | || | || |||| ||| ||||| || || || || |||||||||| || Sbjct 408835 AGAGTATGGCCATCCTCCAGCTGTTTGCCCGCAAATATTAGATGCTGCTGGTCAGGTGGG 408894 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || ||||||||| || || | || | || | || | || | | || || Sbjct 408895 ATGCCCTCCTTGTCTTGGATTTTATTTTTGACATTCTCGATGGTGTCACTGGGCTCAACC 408954 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390 || | ||||| | ||||| |||| || ||||| |||| ||||||| Sbjct 408955 TCAAGGGTGATAATCTTGCCCATGAGGGTCTTCACGAAGACCTGCATC 409002 >seq126465 Length=199800 Score = 82.4 bits (90), Expect = 5e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || || || |||| ||| || || | |||| ||| || || ||||||||||| ||| Sbjct 39098 CCACCACGAAGTCTCAACACAAGATGAAGAGTAGATTCCTTTTGAATGTTGTAGTCAGAC 39039 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || ||| | || |||| |||||||| || || || || | ||||| || || Sbjct 39038 AGAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGA 38979 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | | ||||| || ||||| ||||| || |||| | ||| | | ||| || Sbjct 38978 ATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTCAACC 38919 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390 | | |||||||| || || || || ||||||| || ||||||||| Sbjct 38918 TTGAGGGTGATGGTCTTCCCCGTAAGGGTTTTCATGAAAATCTGCATC 38871 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 321744338543840