Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Carlito_20syrichta_20[refseq_20GCF_5F000164805.1_202013-09-18] 337,189 sequences; 3,453,864,774 total letters Query= NC_002665.1 Length=108873 Score E Sequences producing significant alignments: (Bits) Value seq314303 1433 0.0 seq304600 136 3e-27 seq307670 93.3 3e-14 >seq314303 Length=304259 Score = 1433 bits (1588), Expect = 0.0 Identities = 1309/1644 (80%), Gaps = 55/1644 (3%) Strand=Plus/Plus Query 107135 AAGGGTCTTAGGCAGGACTTGACTGAGGATATTTGTCTATAGAAGACATCTATCTTTACC 107194 |||| || | |||||| | |||||||||||||| | | |||| || ||| ||| || Sbjct 94766 AAGGCTCCTGGGCAGGC--TCACTGAGGATATTTGCCCAGAGAAAACGCCTAGTTTT-CC 94822 Query 107195 ATCACTCTGGAGTTGAACTTGATGTT-CTGG-----ATTAGTTTGTAATTAAAGGCATTT 107248 | || | ||||||||||||||||||| |||| ||| ||||||||| | |||||||| Sbjct 94823 AACAGTTTGGAGTTGAACTTGATGTTTCTGGGAACGATTGGTTTGTAATAAGAGGCATTT 94882 Query 107249 TGTTCTGTCCAAGGAT-CTCC--TCCTCCACCTTGCCTGTGCCCAAACTCTCCTGATCTC 107305 ||||||| |||||||| || | |||||| |||| | |||| ||||||| Sbjct 94883 TGTTCTGCCCAAGGATTCTGCCTTCCTCCTCCTTCCGGTTGCC----------TGATCTC 94932 Query 107306 --CCA--TCCCATGAAGATGGCTGGGTGGAAGAAGAAGCTTTGCCGGGGACATCATCTGT 107361 ||| | |||||| ||| | |||||| || || ||||| || ||| |||| Sbjct 94933 TACCAGTTTCCATGA---TGGTTCAGTGGAAAAAA---CTCTGCCGACAACGTCACCTGT 94986 Query 107362 GGGCCCTGGGCTGCTATATGCTGCTGGCCGTTGTTTCTCTGAGACTTTCCCTCAGGTTTA 107421 ||||||||||||||||||||||||||||| | || || ||| ||||| |||||||| | Sbjct 94987 GGGCCCTGGGCTGCTATATGCTGCTGGCCATCATTGCTTTGAAGCTTTCTCTCAGGTTGA 95046 Query 107422 AATGTGATGTAGATTCCTTGGATCTGGAGTCCAGGGACTTCCAGAGTCAGCACTGTAGGG 107481 |||||||| || ||||||| |||||| || || || || || ||||||||||||| Sbjct 95047 AATGTGATTCTGACCACTTGGATTGGGAGTCTAGAGATTTTCAAAGCCAGCACTGTAGGG 95106 Query 107482 ACATGTTGTACAATAGCCTGAAGCTGCCAGCAAAGAGATCCATCAACTGTTCTGGGATCA 107541 | | ||||| || | ||||||||||||||||||| |||||||||||||| ||| ||| Sbjct 95107 ATGTTTTGTATGATTCCTTGAAGCTGCCAGCAAAGAGGTCCATCAACTGTTCGGGGGTCA 95166 Query 107542 CGCGAGGGGACCAGGAAGCAGTGGTCCAGGCCCTCCTAGACAACCTGGAAGTGAAGAAAA 107601 | ||||||||||||||||||||| | ||||| | || | ||| |||| || ||||| Sbjct 95167 CCCGAGGGGACCAGGAAGCAGTGCTTCAGGCTGTTCTGAATAACTTGGAGGTCAAGAAGC 95226 Query 107602 AGCGGTCGCCTCTCACTGGCACCTATTACCTCAACATAACCAGAGACTGTGAGCGCTTCA 107661 || || ||| |||| | | | | |||||| ||| |||||||||||||||| ||| | Sbjct 95227 AGGGG---CCTTTCACAGACGCTGACTACCTCTCCATGACCAGAGACTGTGAGCACTTTA 95283 Query 107662 AGGCCCAAAGGAAGTTCATACAGTTCCCACTGAGTAAAGAAGAGCTAGACTTCCCCATTG 107721 || || ||||||||||||||| |||||||||||| ||||||||| |||||||||||||| Sbjct 95284 AGACCAAAAGGAAGTTCATACGGTTCCCACTGAGCAAAGAAGAGTCAGACTTCCCCATTG 95343 Query 107722 CCTACTCGATGGTGGTCCATGAGAAGATTGAAAACTTTGAACGGCTGCTGCGAGCCGTGT 107781 | ||||| |||||| | |||||||||||||||||||||||| |||||||||||||||||| Sbjct 95344 CATACTCTATGGTGATTCATGAGAAGATTGAAAACTTTGAAAGGCTGCTGCGAGCCGTGT 95403 Query 107782 ATGCCCCTCAGAACATATACTGTGTCCACGTGGATGTGAAGTCCCCAGAGACTTTCAAAG 107841 |||||||||| |||||||||||| |||| ||||||| |||||||||||| || ||||||| Sbjct 95404 ATGCCCCTCAAAACATATACTGTATCCATGTGGATGAGAAGTCCCCAGAAACATTCAAAG 95463 Query 107842 AGGCGGTCAAGGCCATTATTTCCTGCTTCCCCAATGTCTTCATGGCCAGTAAGTTGGTCC 107901 |||| ||||| || |||| ||| |||||||| ||||||||| | ||||||||| |||| Sbjct 95464 AGGCTGTCAAAGCAATTACTTCATGCTTCCCAAATGTCTTCGTAGCCAGTAAGCTGGTTA 95523 Query 107902 CGGTGGTTTATGCCTCCTGGTCCAGAGTGCAAGCTGACCTGAACTGTATGGAAGACTTGC 107961 ||||||||||||||||||||| || |||||||||||||||||||| |||||||| |||| Sbjct 95524 GGGTGGTTTATGCCTCCTGGTCGAGGGTGCAAGCTGACCTGAACTGCATGGAAGATTTGC 95583 Query 107962 TCCAGAGCTCAGTGCCATGGAAGTACTTACTGAATACATGCGGGACAGACTTCCCCATAA 108021 | |||||||||||||| ||||| ||||| |||||||| || ||||||||||| || |||| Sbjct 95584 TTCAGAGCTCAGTGCCTTGGAAATACTTCCTGAATACGTGTGGGACAGACTTTCCTATAA 95643 Query 108022 AGACCAATGCCGAGATGGTCCTGGCCCTCAAGATGTTGAAGGGTAAGAACAGTATGGAGT 108081 ||||||||||||||||||||| |||||| ||||||||||| || || ||||| ||||||| Sbjct 95644 AGACCAATGCCGAGATGGTCCAGGCCCTTAAGATGTTGAATGGGAAAAACAGCATGGAGT 95703 Query 108082 CTGAGGTACCTTCTGAGTCCaaaaaaaaTCGCTGGAAATACCGCTATGAG---GTGACAG 108138 | ||| ||||| |||| | ||||| ||| |||||||| || | ||||||| |||| || Sbjct 95704 CAGAGATACCTACTGAATACAAAAGAAACCGCTGGAAGTATCACTATGAGGTAGTGAAAG 95763 Query 108139 ACACACTGTACCCTACCAGCAAGATGAAGGACCCTCCCCCTGATAATTTACCCATGTTCA 108198 | || ||||| ||| |||| ||||| ||||||||| |||| || | ||||||| Sbjct 95764 ATACCTTGTACATATCCAACAAGGAGAAGGGTCCTCCCCCTCATAACGTAACTATGTTCA 95823 Query 108199 CAGGGAATGCCTATTTTGTGGCCTCTCGAGCCTTTGTCCAACATGTCTTAGACAACCCTA 108258 ||||||||||||| ||||||| ||||||| ||| |||| || |||||| | ||||||| Sbjct 95824 TAGGGAATGCCTATATTGTGGCTTCTCGAGACTTCATCCAGCACGTCTTAAAGAACCCTA 95883 Query 108259 AATCCCAAAGACTGGTTGAATGGGTCAAAGACACCTATAGCCCCGACGAACACCTCTGGG 108318 |||||||| |||| |||||||||| |||||||||||||| ||||| ||||| ||||||| Sbjct 95884 AATCCCAACAACTGATTGAATGGGTAAAAGACACCTATAGTCCCGATGAACATCTCTGGG 95943 Query 108319 CCACCCTTCAGCGTGCTCCGTGGATGCCTGGCTCTGTTCCTAGCCACCCCAAGTATCACA 108378 |||||||||||||||| | ||||||||| ||||||||||| |||| ||||||| ||| Sbjct 95944 CCACCCTTCAGCGTGCACAGTGGATGCCCGGCTCTGTTCCCTTGCACCGCAAGTATGACA 96003 Query 108379 TCTCAGACATGACTGCCATCGCCAGGCTCGTCAAGTGGCAGTACCACGAGGGAGATGTCA 108438 |||||||||||||| | || |||||||| ||||| |||||| | ||||| ||||| ||| Sbjct 96004 TCTCAGACATGACTTCTATTGCCAGGCTAGTCAAATGGCAGGAACACGAAGGAGACATCA 96063 Query 108439 GCATGGGGGCGCCTTATGCACCCTGCTCTGGAATCCATCGGAGGGCCATCTGCATTTACG 108498 | | |||||| |||||| | | |||||||||||||| | | | | |||| ||||| | Sbjct 96064 GTAAGGGGGCACCTTATACCTCTTGCTCTGGAATCCACCAGCGATCTGTCTGTATTTATG 96123 Query 108499 GGGCCGGGGACCTGTACTGGATTCTCCAGAACCATCACCTCTTGGCAAACAAGTTTGACC 108558 || | || |||||| ||||||| || || | ||||||||| || || ||||||||||||| Sbjct 96124 GGACTGGAGACCTGCACTGGATGCTTCAAAGCCATCACCTGTTAGCCAACAAGTTTGACC 96183 Query 108559 CGAGGGTGGATGATAACGTCCTGCAGTGCTTAGAAGAGTACCTACGTCATAAGGCCATCT 108618 | | ||||||| |||| | || ||||| | ||||| ||| |||||||||||||||||| Sbjct 96184 CAAAGGTGGATAATAATGCACTTCAGTGTCTGGAAGAATACTTACGTCATAAGGCCATCT 96243 Query 108619 ATGGGACTGAACTTTGAGCTGCACTGTGGG----------CC----AGGGACTGTGCCAA 108664 | ||||||||||| |||| |||| || | || || | || || Sbjct 96244 ACGGGACTGAACTCTGAGGCACACTTTGAGATTGTTGATACCTGTGGGGCAATGATTAAA 96303 Query 108665 CATGCCCAGGGCGTACTGGTACTGTGTGGGGTGGGGGACGAGGGCTGTGGAATCCATGGC 108724 ||||||||| | |||| || ||||||||||||||| |||| | ||| | |||| Sbjct 96304 CATGCCCAGAACTGGCTGGGACAATGTGGGGTGGGGGACCAGGGTTTTGG---GCCTGGC 96360 Query 108725 ATCCCCCAGGGTCAGAGGGCTGCT 108748 | |||| ||| | ||||||||||| Sbjct 96361 AACCCCTAGGATAAGAGGGCTGCT 96384 >seq304600 Length=151085 Score = 136 bits (150), Expect = 3e-27 Identities = 570/886 (64%), Gaps = 29/886 (3%) Strand=Plus/Minus Query 107688 CCACTGAGTAAAGAAGAGCTAGACTTCCCCATTGCCTACTCGATGGTGGTCCATGAGAAG 107747 || || |||||||||||| || || ||||| || || || || ||||| ||| | || Sbjct 35679 CCCCTTAGTAAAGAAGAGGCGGAGTTTCCCATAGCATATTCTATAGTGGTTCATCACAAA 35620 Query 107748 ATTGAAAACTTTGAACGGCTGCTGCGAGCCGTGTATGCCCCTCAGAACATATACTGTGTC 107807 ||||||| | || |||| ||| | ||| | ||| || ||||| | ||||| | Sbjct 35619 ATTGAAATGCTCGACAGGCTCCTGAGGGCCATCTATATGCCCCAGAATTTCTACTGCATT 35560 Query 107808 CACGTGGATGTGAAGTCCCCAGAGACTTTCAAAGAGGCGGTCAAGGCCATTATTTCCTGC 107867 |||||||| || || || | || || || || | || ||| |||||| Sbjct 35559 CACGTGGACAAAAAATCAGAGGATTCCTTTTTAGCTGCAGTGATGGGCATCGCATCCTGC 35500 Query 107868 TTCCCCAATGTCTTCATGGCCAGTAAGTTGGTCCCGGTGGTTTATGCCTCCTGGTCCAGA 107927 ||| ||| |||||| |||||||| |||||| |||||||||||||| ||| | Sbjct 35499 TTCAGCAACGTCTTCGTGGCCAGTCAGTTGGAGAATGTGGTTTATGCCTCATGGAGTCGG 35440 Query 107928 GTGCAAGCTGACCTGAACTGTATGGAAGACTTGCTCCAGAGCTCAGTGC--CATGGAAGT 107985 || || || ||||| ||||| ||| | ||| | || || | | ||||| |||| || Sbjct 35439 GTTCAGGCCGACCTCAACTGCATGAAGGACCT-CTACA-CGATGAGTGCAGACTGGAGGT 35382 Query 107986 ACTTACTGAATACATGCGGGACAGACTTCCCCATAAAGACCAATGCCGAGATGGTCCTGG 108045 |||| | ||| || |||| || || ||||| || ||||| || |||||| | Sbjct 35381 ACTTGATAAATCTTTGTGGGATGGATTTTCCCATCAAAACCAACCTAGAAATGGTCAGGA 35322 Query 108046 CCCTCAAGATGTTGAAGGGTAAGAACAGTATGGAGTCTGA---GGTACCTTCTGAGTCCa 108102 |||||| ||| | ||| | |||| | ||| | || | | || || | | Sbjct 35321 GGCTCAAGTCGTTAATGGGCGAAAACAACCTCGAGACCGAGAGGATGCCATCCAA---TA 35265 Query 108103 aaaaaaaTCGCTGGAAATACCGCTATGAGGTGACAGACACACTGTACCCTACCAGCAAGA 108162 || || | | |||||| | || |||||||||| | | | | || | || | Sbjct 35264 AAGAAGAAAGGTGGAAAAAACGGTATGAGGTGATTAATGGA---AAGCTGACAAACACGG 35208 Query 108163 TGAAGGAC------CCTCC-CCCTGATAATTTACCCATGTTCACAGGGAATGCCTATTTT 108215 || | | | ||| |||| || || | || |||| | |||||| ||| Sbjct 35207 GGACTGTCAAAATGCGTCCTCCCTTGGAA-ACGCCTCTTTTTTCAGGCAGTGCCTACTTT 35149 Query 108216 GTGGCCTCTCGAGCCTTTGTCCAACATGTCTTAGACAACCCTAAATCCCAAAGACTGGTT 108275 |||| | | | | | || |||| | || || ||| ||| | | | Sbjct 35148 GTGGTCAGTAGGGAGTACGTGGGGTATGTGCTGGAGAATGGAAAAATCCAGAAGTTTATG 35089 Query 108276 GAATGGGTCAAAGACACCTATAGCCCCGACGAACACCTCTGGGCCACCCTTCAGCGTGCT 108335 || |||| ||||||| || ||||| || || | |||||||||||| | ||| | | | Sbjct 35088 GAGTGGGCGCAAGACACTTACAGCCCAGATGAGTATCTCTGGGCCACCATCCAGAG-GAT 35030 Query 108336 CCGTGGA-TGCCTGGCTCTGT-TCCT--AGCCACCCCAAGTATCACATCTCAGACATGAC 108391 || || | | |||||||| | |||| ||||| ||||| || | || |||||| Sbjct 35029 CCCTGAAGTCCCTGGCTCACTCTCCTTAAGCCA---TAAGTACGACTTGTCTGACATGCA 34973 Query 108392 TGCCATCGCCAGGCTCGTCAAGTGGCAGTACCACGAGGGAGATGTCAGCATGGGGGCGCC 108451 || | || ||| | ||||||||||||||| ||||| ||||| || ||| || || Sbjct 34972 CGCAGTTGCTAGGTTTGTCAAGTGGCAGTACTTTGAGGGGGATGTTTCCAAGGGCGCACC 34913 Query 108452 TTATGCACCCTGCTCTGGAATCCATCGGAGGGCCATCTGCATTTACGGGGCCGGGGACCT 108511 || | |||||| || |||| | | || | ||| ||| ||| || || ||| | Sbjct 34912 CTACCCGCCCTGCGACGGGGTCCACGTGCGCTCCGTGTGCGTTTTCGGAGCTGGCGACTT 34853 Query 108512 GTACTGGATTCTCCAGAACCATCACCTCTTGGCAAACAAGTTTGAC 108557 | ||||||| || | || || || | || || |||||||||||| Sbjct 34852 GAACTGGATGCTGCGCAAACACCATTTATTCGCCAACAAGTTTGAC 34807 >seq307670 Length=1603115 Score = 93.3 bits (102), Expect = 3e-14 Identities = 177/261 (68%), Gaps = 0/261 (0%) Strand=Plus/Minus Query 107691 CTGAGTAAAGAAGAGCTAGACTTCCCCATTGCCTACTCGATGGTGGTCCATGAGAAGATT 107750 || ||||| |||||| | || ||||| || || || || ||||||||| | || ||| Sbjct 113078 CTTAGTAAGGAAGAGGCGGGGTTTCCCATAGCATAATCTATAGTGGTCCATCACAAAATT 113019 Query 107751 GAAAACTTTGAACGGCTGCTGCGAGCCGTGTATGCCCCTCAGAACATATACTGTGTCCAC 107810 |||| |||| |||| ||| ||| | || | |||||| | ||||| | ||| Sbjct 113018 GAAATGCTTGACAGGCTCCTGACGGCCATCTACATGCATCAGAATGTCTACTGCATTCAC 112959 Query 107811 GTGGATGTGAAGTCCCCAGAGACTTTCAAAGAGGCGGTCAAGGCCATTATTTCCTGCTTC 107870 ||||| ||||| || | ||| || ||||| | || ||| ||||| ||| Sbjct 112958 GTGGACTCAAAGTCAGAGGATTCCTTCTTAGCTGCGGTGATGGGCATCGCATCCTGTTTC 112899 Query 107871 CCCAATGTCTTCATGGCCAGTAAGTTGGTCCCGGTGGTTTATGCCTCCTGGTCCAGAGTG 107930 |||||||| |||| ||| |||||| ||||||| ||| || ||| ||| Sbjct 112898 AGTAATGTCTTTGTGGCTAGTCAGTTGGAGGGTGTGGTTTTTGCATCATGGAGTCAAGTT 112839 Query 107931 CAAGCTGACCTGAACTGTATG 107951 ||||||||||| ||||| ||| Sbjct 112838 CAAGCTGACCTCAACTGCATG 112818 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346837592522586