Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Carlito_20syrichta_20[refseq_20GCF_5F000164805.1_202013-09-18] 337,189 sequences; 3,453,864,774 total letters Query= NC_003094.2 Length=130759 Score E Sequences producing significant alignments: (Bits) Value seq314340 86.0 5e-12 >seq314340 Length=1169179 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 24832 ATGCAGATATTTGTTAAAACCTTAACCGGCAAAACGATAACCGTCGATGTCGAATCGAGC 24891 |||||||| || || || ||| | || ||||| || || ||| | || || || | || Sbjct 629533 ATGCAGATCTTCGTGAAGACCCTCACGGGCAAGACAATCACCCTTGAAGTTGAGCCCAGT 629592 Query 24892 GACAGTGTAGAAACTGTTAAGGAAAAAATTGCTGCAAAAGAAGGCGTACCGGTTGACCAG 24951 |||| |||| | ||| || | |||| | || || ||| | || ||||||| Sbjct 629593 GACACCATAGAGAATGTCAAAGCTGAAATCCAAGACAAGGAGGGCATCCCACCTGACCAG 629652 Query 24952 CAACGTTTAATATATGCGGGCAAACAACTGGAAGATTCCATGACTATGAACGATTACAGC 25011 || ||| | |||| |||||||||||| ||||| ||| | ||| | || |||| | Sbjct 629653 CAGCGTCTGATATTTGCGGGCAAACAGCTGGAGGATGGCTGCACTCTTTCAGACTACAAC 629712 Query 25012 ATACAGAAAGAGGCCACGCTTCATTTAGTGTTACGATTGCGCGGAGG 25058 || ||||||||| |||| || || | ||| | || |||| || || Sbjct 629713 ATCCAGAAAGAGTCCACCCTGCACCTGGTGCTGCGCCTGCGAGGTGG 629759 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 416584983502880