Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Carlito_20syrichta_20[refseq_20GCF_5F000164805.1_202013-09-18] 337,189 sequences; 3,453,864,774 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq301619 385 6e-102 seq311471 333 3e-86 seq301777 260 2e-64 seq307187 215 6e-51 seq117952 210 3e-49 seq47313 172 7e-38 seq302432 156 5e-33 seq316284 125 9e-24 seq303989 111 2e-19 seq96983 98.7 1e-15 seq313520 89.7 6e-13 >seq301619 Length=432943 Score = 385 bits (426), Expect = 6e-102 Identities = 650/937 (69%), Gaps = 12/937 (1%) Strand=Plus/Plus Query 33235 TTTAAAAGTCAACATCTAAAGAAAAATGATTGTCTTCTTGA---GACATAACTCCCATTT 33291 |||| |||||| |||| |||| |||| ||| || | || ||||| |||| ||| Sbjct 188341 TTTAGAAGTCAGCATCCAAAGTAAAAGAATTCTCCGTTGGACTTGACATCACTCATATTC 188400 Query 33292 TTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTTT 33351 | || ||||| || || | || || || || ||||| ||||||||| ||| |||| | Sbjct 188401 TCTGATATTCGCCTACTCTCTTCTCAAAGAAGTTAGTCATTCCTTCCAGTGAAGTATTAT 188460 Query 33352 CCATGAAATCAAACGGATTGGTAACATTGTAAAtttttttAAATCCCAATTCAGAAATCA 33411 |||| || ||||| ||||| || ||| ||| || |||| |||| ||| || | Sbjct 188461 CCATCAAGTCAAATGGATTTTCTACTTTGAAAACCTTGCTAAAACCCAGTTCCAGCATAA 188520 Query 33412 ATCTATCTGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATGAGTT 33471 ||| || || || || || || ||| ||||| | |||||||| || ||||| | Sbjct 188521 GTCTGTCAGCCACAAACTCGATGTATTGCTTCATTAAAATGCAATTCATCCCAATGAGCT 188580 Query 33472 TAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATGGATACCGCATTTGTTATAATAA 33531 | || || | || | || || || || ||||| || || ||||| | || || Sbjct 188581 TCACAGGCAAGGCTTCTGTGAGGAACTCCTGTTCTATCCTAACTGCATTGATGATTATTT 188640 Query 33532 ATCTAACGGTTTCTTCACTCGGTGGAT---GTAATAAATGTTTAAACATCAAACATGCGA 33588 | | || | ||| | | || ||| | ||| | ||||| || |||| || || | Sbjct 188641 CTTTTAC--TCTCTGCTC-CGATGGTTTGTGTATCAGGTGTTTGAATATCAGGCAGGCAA 188697 Query 33589 AATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGGCA 33648 | || ||||| | ||||| ||||| ||||| | ||| || | ||| ||||| || |||| Sbjct 188698 AGTCACAGTGTAAGCCCTCATCTCTGCTAATAAGTTCATTGGGAAATGTGAGGCCAGGCA 188757 Query 33649 TTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTCCTT 33708 | || || | || || ||||| ||||| || | || || || |||||| |||| |||| Sbjct 188758 TCAGTCCTCATTTCTTGAGCCAGAATATCGATGTAAAAGAACCAGAAAAGCAGATGCCTT 188817 Query 33709 CTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGC---TGTCATGTATCCACT 33765 | |||||||||||||| | || | ||||||||| || |||| |||| Sbjct 188818 CCACTGCAGCAAAGGCTACAACACGTTCTCCATAAGTAGCCTCTTTGTCCCCAGTCCAAC 188877 Query 33766 TTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGAT 33825 |||||||| |||||||| || |||||||||||||| || |||||||| |||||| Sbjct 188878 GCAAGGCCCAATCTGCCTTCTTCTTGACACAAGGCATCGTCTCAATGGCATTGAAGAGAA 188937 Query 33826 AGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAAT 33885 | | |||| || ||||||| ||||| || || | ||||| |||||||| |||| Sbjct 188938 ATTCCCTTTCTTTGGGGTCTTTAATGTAAGTGTCAATAAGGAGACTGTACATTTCAGAAT 188997 Query 33886 GAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTT 33945 | |||||||| ||||| || || || || |||||||| | || || |||| || |||| Sbjct 188998 GTATGTTTTCCATGGCAATTTGGAAGCCATAGAAACAGCGGGCTTCTGTAACTTGAACTT 189057 Query 33946 CTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCATCACTGGCTGCAAAAAACG 34005 || | |||||| || | || |||||||| ||||| ||||| || |||||||| || | Sbjct 189058 CTTGGCTAAATCGCTCCACCAAGTTTTCATTTACTATGCCATCTCTTGCTGCAAAGAAAG 189117 Query 34006 CCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTGATAT 34065 || ||| | |||||||||| | || | ||| | || | ||| | || | Sbjct 189118 TCAGAACACGCGATATAAAATATCTCTCCACAGGTTTCAGGGATTCCCAGTGCCGGAGGT 189177 Query 34066 CTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATAT 34125 |||| | | ||| || ||||| |||||||||| || ||||| || || | ||||| | Sbjct 189178 CTTTGGTAAGATCAACCTCTTCAGCTGTCCAAAAGGAGGCCTCAGCTTTCGTGTACATCT 189237 Query 34126 TCCAGATGTCATGATATTGGATTGGGAAAATAACAAA 34162 |||||||||||| || | ||| || || || ||||| Sbjct 189238 GCCAGATGTCATGGTACTCGATAGGAAAGATGACAAA 189274 >seq311471 Length=497027 Score = 333 bits (368), Expect = 3e-86 Identities = 363/481 (75%), Gaps = 1/481 (0%) Strand=Plus/Minus Query 188174 CTCCTCCATCGAGGACGACTTCAACTATGACAGCTCGGTGGCGTCTGCCAGCGTGCACAT 188233 ||||||||||||||||||||||||||| | |||| ||||| || |||||| ||||||| Sbjct 128450 CTCCTCCATCGAGGACGACTTCAACTACGGCAGCAACGTGGCCTCCGCCAGCATGCACAT 128391 Query 188234 ACGAATGGCATTTCTAAGAAAAGTCTACGGTATCCTTG-TCTACAATTTCCTTTAACAAC 188292 || ||||| || || || ||||| || || |||||| ||| ||| | | | || || Sbjct 128390 CCGCATGGCCTTCCTGAGGAAAGTGTATGGCATCCTTTCTCTGCAAGTCCTCCTGACTAC 128331 Query 188293 GGCAACAGCTGCAGTATTTTTATACTTTGAATGCATTCGGACATTTATACAAGGGAGTCC 188352 | || ||||| ||||| ||||| || | | ||||||||| | || ||||| Sbjct 128330 GATGACTTTCGCAGTGTTTTTGTACTTCGAGTCTGTACGGACATTTGTGCATAACAGTCC 128271 Query 188353 TGTTCTAATATTGGCATCAATGTTCGGATCTATAGGCTTGATTTTCGCATTGACTTTACA 188412 || |||| ||| || || || || | ||||||||||| || |||||| |||| Sbjct 128270 TGCAGTAATTCTGGTGTCTGCCTTTGGGTCCTTGGGCTTGATTTTTGCCTTGACTCTACA 128211 Query 188413 CAGACATAAACATCCCCTGAATCTGTACCTACTTTGTGGATTTACACTGTTAGAATCTCT 188472 ||||||||| ||||||| || |||||||| |||| ||||||||||||| | ||| | || Sbjct 128210 CAGACATAAGTATCCCCTCAACCTGTACCTGCTTTTTGGATTTACACTGATGGAAGCCCT 128151 Query 188473 AACGCTGGCCTCTGTTGTTACTTTCTATGATGCGCGTATCGTTATACAAGCTTTCATGTT 188532 || |||||| ||| |||||||||||||| || || || | |||||||| || | Sbjct 128150 GACTGTGGCCTTTGTGGTTACTTTCTATGACATACGGATTATTCTGCAAGCTTTTATACT 128091 Query 188533 GACTACTGCAGTGTTTCTTGCTCTGACTACATGTACTCTACAATCAAAGAGAGATTTCAG 188592 ||| ||| |||| || |||||| ||||| | | ||||| ||||| |||||||||||||| Sbjct 128090 GACGACTACAGTATTCCTTGCTTTGACTGCCTACACTCTCCAATCCAAGAGAGATTTCAG 128031 Query 188593 TAAACTTGTAACAGGATTGTTTGCTGCTTTCTGGATTTTAATTTTGTCAGGAGTCTTGAG 188652 ||| ||| | |||| |||||||||| || |||||||| ||||||||| ||||||| Sbjct 128030 CAAATTTGGAGCAGGGCTGTTTGCTGCCTTTTGGATTTTGTGGTTGTCAGGATTCTTGAG 127971 Query 188653 G 188653 | Sbjct 127970 G 127970 >seq301777 Length=185553 Score = 260 bits (288), Expect = 2e-64 Identities = 531/784 (68%), Gaps = 20/784 (3%) Strand=Plus/Minus Query 33235 TTTAAAAGTCAACATCTAAAGAAAAATGATTGTCTTCTTGA---GACATAACTCCCATTT 33291 |||| ||| | |||| ||| |||| ||| ||| |||| ||||| |||| |||| Sbjct 170401 TTTAGAAGATAGCATCCCAAGTAAAAGAATTCTCTGTTTGACTTGACATCACTCGCATTC 170342 Query 33292 TTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTTT 33351 | || ||| | || || | || || || || ||||| ||||||| || ||| ||||| | Sbjct 170341 TCTGATATCCGCCTACTCTCTTCTCAAAGAAGTTAGTCTTTCCTTTCAGTGAAATATTCT 170282 Query 33352 CCATGAAATCAAACGGATTGGTAACATTGTAAAtttttttAAATCCCAATTCAGAAATCA 33411 || |||| ||||| ||| | || ||| ||| || |||| ||| ||| || | Sbjct 170281 CCGTGAAGTCAAATGGACTTTCTACTTTGAAAACCTTGCTAAAATCCAGTTCCAGTATAA 170222 Query 33412 ATCTATCTGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATGAGTT 33471 ||| | | || || || || |||| ||||| | |||||||| || |||| | Sbjct 170221 GTCTGTTGCCCACAAACTCGATGTATGGCTTCATTAAAATGCAATTCATCCCAGTGAGCT 170162 Query 33472 TAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATGGATACCGCATTTGTTATAATAA 33531 | || || || ||| || || || || ||||| || || ||||| | || || Sbjct 170161 TCACAGGCAGGGCCTAGGTGAGGAACTCCTGTTCTATCCTAACAGCATTGATGATTATTT 170102 Query 33532 ATCTAACGGTTTCTTCACT--CGGTGGATGTAATAAATGTTTAAACATCAAACATGCGAA 33589 | | || | ||| | | |||| |||| | ||||| || |||| || || || Sbjct 170101 CTTTTAC--TCTCTGCTGTGACGGTTTGTGTATCAGGTGTTTGAATATCAGGCAGGCAAA 170044 Query 33590 ATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTA----GAAAACGTGAGTCCGG 33645 || ||||| | || ||| ||||| ||||| | || ||| ||| | ||||| || | Sbjct 170043 GTCACAGTGTAAACTCTCATCTCTGCTAATAAGTTAGTTCACTGGAACATGTGAGGCCAG 169984 Query 33646 GCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTC 33705 |||| | || | || || ||||| ||||| | | || || || ||||||||||| | Sbjct 169983 GCATCATTCCTTGTTTCTTGAGCCAGAATATCAATACAAAAGAACCAGAAAAGAAGATGC 169924 Query 33706 CTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCAT----AACCGGCGCTGTCATGTATC 33761 || | |||||||||||||| | || |||||||| | | | |||| || ||| Sbjct 169923 CTCCCACTGCAGCAAAGGCTACAACATGCTCTCCATTAAGTAGCCTCCTTGTCCTGAATC 169864 Query 33762 CACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAG 33821 || | |||||| ||||||||||| ||||| |||||||| || ||||| || | Sbjct 169863 CAATGCAAGGCCCAACTTGCCTTCTTTTTGACACAGGGCATCGTCTCAATGGCGTTGA-- 169806 Query 33822 AGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCC 33881 |||| || || || ||||||| ||||| || || | ||||| ||||||| Sbjct 169805 TGATAAATTCCCTCTTTGGAGTCTTTAATGTAAGTGTCAATAAGGAGACTGCACATTTCA 169746 Query 33882 GAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGC 33941 ||||| |||||||| ||||| || || || || |||||||| || || |||| || Sbjct 169745 GAATGTATGTTTTCCATGGCAATTTGGAAGCCATAGAAACAGTGGGCTTCTGTAACTTGA 169686 Query 33942 ACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCATCACTGGCTGCAAAA 34001 |||||| | |||||| || | || |||||||| ||||| |||||| | ||||| | Sbjct 169685 ACTTCTTGGCTAAATCGCTCCACCAAGTTTTCATTTACTATGCCATCATT---TGCAACA 169629 Query 34002 AACG 34005 |||| Sbjct 169628 AACG 169625 >seq307187 Length=256970 Score = 215 bits (238), Expect = 6e-51 Identities = 345/487 (71%), Gaps = 15/487 (3%) Strand=Plus/Minus Query 188170 CGTGCTCCTCCATCGAGGACGACTTCAACTATGACAGCTCGGTGGCGTCTGCCAGCGTGC 188229 || |||||| ||||||| ||||||||||||| | |||| ||||| ||||| | ||||| Sbjct 38342 CGGGCTCCTTCATCGAGAACGACTTCAACTACGGCAGCAACGTGGCCTCTGCAATCGTGC 38283 Query 188230 ACATACGAATGGCATTTCTAAGAAAAGTCTACGGTATCCTTG-TCTACAATTTCCTTTAA 188288 |||| || |||| || || || ||||||||||| |||||| ||| || ||| | Sbjct 38282 ACATCCGCATGGTCTTCCTGAGGAAAGTCTACGGCATCCTTTCTCTGCAGGTTCTGCCAG 38223 Query 188289 CAACGGCAACAGCTGCAGTATTTTTATACTTTGAATGCATTCGGACATTTATACAAGGGA 188348 | ||| || | | || || | | || | | |||| | | || || | Sbjct 38222 CTACGATGACTTCCG--GTGTTATGAGTCTGTAGAGACATTTG------TGTATAAC--A 38173 Query 188349 GTCCTGTTCTAATATTGGCATCAATGTTCGGATCTATAGGCTTGATTTTCG-CATTGACT 188407 || || ||| ||| || || ||||| | ||| ||||||| | |||||| Sbjct 38172 TTCTTGCCTGAATTCTGGTGTCCGCCTT-GGATCATTGGGCCTGATTTTTTTCCTTGACT 38114 Query 188408 TTACACAGACATAAACATCCCCTGAATCTGTACCTACTTTGTGGATTTACACTGTTAGAA 188467 ||||||| ||||| |||||| ||||||||||| |||| ||||||||||||| | || Sbjct 38113 CTACACAGGCATAAGTGTCCCCTTAATCTGTACCTGCTTTTTGGATTTACACTGATGAAA 38054 Query 188468 TCTCTAACGCTGGCCTCTGTTGTTACTTTCTATGATGCGCGTATCGTTATACAAGCTTTC 188527 | || || |||||| || ||||||||||||||| || || || ||||| ||| Sbjct 38053 ACCCTGACTGTGGCCTTTGCAGTTACTTTCTATGATATACGGATTATTCCACAAGATTTT 37994 Query 188528 ATGTTGAC-TACTGCAGTGTTTCTTGCTCTGACTACATGTACTCTACAATCAAAGAGAGA 188586 || |||| ||| || | ||||||| ||||| ||| ||||||||| | |||||||| Sbjct 37993 ATACTGACGAACTACAATATTTCTTGGCTTGACTGCATACACTCTACAAGCCAAGAGAGA 37934 Query 188587 TTTCAGTAAACTT-GTAACAGGATTGTTTGCTGCTTTCTGGATTTTAATTTTGTCAGGAG 188645 ||||| ||| || | | |||| ||||||||| ||||||||| || ||||||||| Sbjct 37933 TTTCAACAAATTTGGGAGCAGGGCTGTTTGCTGTTTTCTGGATCTTGTGGTTGTCAGGAT 37874 Query 188646 TCTTGAG 188652 ||||||| Sbjct 37873 TCTTGAG 37867 >seq117952 Length=1479372 Score = 210 bits (232), Expect = 3e-49 Identities = 284/392 (72%), Gaps = 4/392 (1%) Strand=Plus/Plus Query 33772 CCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAGtttt 33831 ||||||| ||||||||||| ||||||| |||||| || |||||||| |||||| | || Sbjct 1360513 CCCAATCTGCCTTCTTTTTGACACAAGCCATCGTCTCAATGGCATTGAAGAGAAATTTCC 1360572 Query 33832 tttCATTACTATCTTTAA-CATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATG 33890 |||| || | ||||||| ||||| || || | |||| |||||| | ||||| ||| Sbjct 1360573 TTTCTTTGCAGTCTTTAATGTTAAGTGTCAATAAGGAGAC--TACATTCCAGAATGTATG 1360630 Query 33891 TTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTCTGTA 33950 ||||| | || || || || || |||||| | | ||| || |||| || |||||| | Sbjct 1360631 TTTTCCACAGCAATTTGGAAGCCATAGAAATAGCGAGCTTCTGTAACTTGAACTTCTTGA 1360690 Query 33951 CAAAATCGTTCTGCTAAATTTTCATTCACTATTCCATCACTGGCTGCAAAAAACGCCAAT 34010 | ||||| || | || |||||||| ||||| ||||| || |||||||| || |||| Sbjct 1360691 CTAAATCACTCCAC-AAGTTTTCATTTACTATGCCATCGCTTGCTGCAAAGAAAGCCACA 1360749 Query 34011 ACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTGATATCTTTA 34070 ||||| |||||||| | | || || || | || | ||| | | || || || Sbjct 1360750 ACATGCGATATAAAATCTCTCTCCTCAGGCTTCAGGGCTTCCCAGTGCTGGAGGTCCTTG 1360809 Query 34071 GATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAG 34130 || | ||| || | || ||||||||| || ||||| || || |||||||| | ||| Sbjct 1360810 GAAAGATCAACCTTCTCGGTTGTCCAAAAGGAGGCCTCAGCTTTCTTATACATCTGCCAA 1360869 Query 34131 ATGTCATGATATTGGATTGGGAAAATAACAAA 34162 |||||||| |||| || || || || ||||| Sbjct 1360870 ATGTCATGGTATTCCATAGGAAAGATGACAAA 1360901 Score = 201 bits (222), Expect = 1e-46 Identities = 343/494 (69%), Gaps = 5/494 (1%) Strand=Plus/Plus Query 33235 TTTAAAAGTCAACATCTAAAGAAAAATGATTGTCTTCTTGA---GACATAACTCCCATTT 33291 |||| |||||| |||| |||| |||| ||| | | | || ||||| ||||||||| Sbjct 1359784 TTTAGAAGTCAGCATCCAAAGTAAAAGAATTCTTTGTTGGACTTGACATCACTCCCATTC 1359843 Query 33292 TTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTTT 33351 | || |||| || || | || || || || || || | |||||||| ||| ||||| | Sbjct 1359844 TCTGATATTTGCCTACTCTCTTCTCAAAGAAGTTTGTCTCTCCTTCCAGTGAAATATTCT 1359903 Query 33352 CCATGAAATCAAACGGATTGGTAACATTGTAAAtttttttAAATCCCAATTCAGAAATCA 33411 ||||||| ||||| ||||| || ||| ||| || |||| |||| ||| || | Sbjct 1359904 CCATGAAGTCAAATGGATTTTCTACTTTGAAAACCTTGCTAAAACCCAGTTCCAGCATAA 1359963 Query 33412 ATCTATCTGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATGAGTT 33471 |||||| || || || || || ||| ||||| | |||||||| || ||||| | Sbjct 1359964 GTCTATCGGCCACAAACTCGATGTATTGCTTCATTAAGATGCAATTCATCCCAATGAGCT 1360023 Query 33472 TAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATGGATACCGCATTTGTTATAATAA 33531 | || || | ||| | || | || || ||||| || || ||||| | || || Sbjct 1360024 TCACAGGCAAGGCCTCGGTGGGGAACTCCTGTTCTATCCTGACAGCATTGATGATTATTT 1360083 Query 33532 ATCTAACGGTTT-CTTCACTCGGTGGATGTAATAAATGTTTAAACATCAAACATGCGAAA 33590 | | || ||| || || | | | | ||| | ||||| ||||||| || || || Sbjct 1360084 CTTTTACTCTTTGCTCCAATGGTTTG-TGTGTCAGGTGTTTGAACATCAGGCAGGCAAAG 1360142 Query 33591 TCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGGCATT 33650 || ||||| | |||||| |||| |||| | ||| | ||||| ||||| || ||||| Sbjct 1360143 TCACAGTGTAAACCCTCAACTCTGTTAATAAGTTCACTGGAAAATGTGAGACCAGGCATC 1360202 Query 33651 AGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTCCTTCT 33710 || || | || || ||||| ||||| || || || || || ||||||||||| ||||| Sbjct 1360203 AGTCCTTGTTTCTTGAGCCAGAATATCGATGCAAAAGAACCAGAAAAGAAGATGCCTTCC 1360262 Query 33711 ACTGCAGCAAAGGC 33724 | |||||||||||| Sbjct 1360263 ATTGCAGCAAAGGC 1360276 >seq47313 Length=737707 Score = 172 bits (190), Expect = 7e-38 Identities = 248/349 (71%), Gaps = 2/349 (1%) Strand=Plus/Plus Query 188303 GCAGTATTTTTATACTTTGAATGCATTCGGACATTTATACAAGGGAGTCCTGTTCTAATA 188362 ||||| |||||| |||| || | | |||||||| | || | ||||| |||| Sbjct 684253 GCAGTGTTTTTACACTTCGAGTCTGTACGGACATTCGTGCACAACAATCCTGCCATAATT 684312 Query 188363 TTGGCATCAATGTTCGGATCTATAGGCTTGATTTTCGCATTGACTTTACACAGACATAAA 188422 ||| || || | ||| | ||||||||||| || || ||| |||||||||| | Sbjct 684313 CTGGGGTCTGCCTTGGAATCCTTGGGCTTGATTTTGGCCTTAACTCCACACAGACATGAG 684372 Query 188423 CATCCCCTGAATCTGTACCTACTTTGTGGATTTACACTGTTAGAATCTCTAACGCTGGCC 188482 ||||||| || |||||||| |||| ||||||||| ||| | ||| | || || ||| | Sbjct 684373 TATCCCCTCAACCTGTACCTGCTTTTTGGATTTACCCTGATGGAAGCCCTGACTGTGGTC 684432 Query 188483 TCTGTTGTTACTTTCTATGATGCGCGTATCGTTATACAAGCTTTCATGTTGACTACTGCA 188542 | ||| |||||||||||||| | || || | |||||||| | ||| || || Sbjct 684433 TTTGTGGTTACTTTCTATGACATATGGATTATTCTGCAAGCTTTTAGACTGATGACGACA 684492 Query 188543 GTGTTTCTTGCTCTGACTACATGTACTCTACAATCAAAGAGAGATTTCAGTAAACTTGTA 188602 || ||||||| | |||| | | || || ||||| ||||||| ||| | ||| ||| | Sbjct 684493 GTATTTCTTGGTTTGACGGCCTACACCCTCCAATCCAAGAGAG--TTCGGCAAAATTGGA 684550 Query 188603 ACAGGATTGTTTGCTGCTTTCTGGATTTTAATTTTGTCAGGAGTCTTGA 188651 |||| ||||||||| || |||||||| ||||||||| |||||| Sbjct 684551 GCAGGGCTGTTTGCTGTCTTTTGGATTTTGTGGTTGTCAGGATTCTTGA 684599 >seq302432 Length=904365 Score = 156 bits (172), Expect = 5e-33 Identities = 239/337 (71%), Gaps = 14/337 (4%) Strand=Plus/Plus Query 188173 GCTCCTCCATCGAGGACGACTTCAACTATGACAGCTCGGTGGCGTCTGCCAGCGTGCACA 188232 |||| |||||| |||||||||||||||| |||| |||| || | |||| |||||| Sbjct 518248 GCTCTTCCATCAAGGACGACTTCAACTACAGCAGCAACATGGCCTCCGTCAGCATGCACA 518307 Query 188233 TACGAATGGCATTTCTAAGAAAAGTCTACGGTATCCTTG-TCTACAATTTCCTTTAACAA 188291 | | ||||| || || || |||||||| || |||||| ||| || | | |||| | Sbjct 518308 TCCACATGGCCTTCCTGAGGAAAGTCTATGGCATCCTTTCTCTGCAGGTCCTCCTAACTA 518367 Query 188292 CGGCAACAGCTGCA--GTATTTTTATACTTTGAATG--------CATTCGGACATTTATA 188341 | | | |||| || |||||||| ||||| | |||| |||||||| | Sbjct 518368 CA--ATGATTTGCACAGTGTTTTTATAGTTTGAGTCTGTACGGACATT-GGACATTTGTT 518424 Query 188342 CAAGGGAGTCCTGTTCTAATATTGGCATCAATGTTCGGATCTATAGGCTTGATTTTCGCA 188401 || |||||| | |||| ||| || ||| ||||| | | ||||| ||| || Sbjct 518425 CAGAACAGTCCTACTTTAATTCTGGTGTCTGCCTTCTGATCTTTGGCCTTGACTTTTGCC 518484 Query 188402 TTGACTTTACACAGACATAAACATCCCCTGAATCTGTACCTACTTTGTGGATTTACACTG 188461 |||||| |||||||| | || ||||||| || |||||||| |||| |||||||| |||| Sbjct 518485 TTGACTCTACACAGAGAAAAGTATCCCCTTAACCTGTACCTGCTTTTTGGATTTATACTG 518544 Query 188462 TTAGAATCTCTAACGCTGGCCTCTGTTGTTACTTTCT 188498 | ||| || || |||||| || ||||||||||| Sbjct 518545 ATGGAAGTCCTGACTGTGGCCTTTGCTGTTACTTTCT 518581 Score = 131 bits (144), Expect = 2e-25 Identities = 131/170 (77%), Gaps = 0/170 (0%) Strand=Plus/Plus Query 188484 CTGTTGTTACTTTCTATGATGCGCGTATCGTTATACAAGCTTTCATGTTGACTACTGCAG 188543 ||| || |||||||||||| | || | || | |||||||| || ||| ||| ||| Sbjct 518873 CTGCTGCTACTTTCTATGACACATGTCTGATTCTGCAAGCTTTTATACTGATGACTACAG 518932 Query 188544 TGTTTCTTGCTCTGACTACATGTACTCTACAATCAAAGAGAGATTTCAGTAAACTTGTAA 188603 | ||| ||| ||||| ||| |||||||||||| || ||||||||||| ||| ||| | Sbjct 518933 TATTTGTTGGGTTGACTGCATATACTCTACAATCCAAAAGAGATTTCAGCAAAATTGGAG 518992 Query 188604 CAGGATTGTTTGCTGCTTTCTGGATTTTAATTTTGTCAGGAGTCTTGAGG 188653 |||| ||||||||| ||| |||||||| ||||||||| |||||||| Sbjct 518993 CAGGGCTGTTTGCTGTTTTTTGGATTTTGTGGTTGTCAGGATTCTTGAGG 519042 >seq316284 Length=490044 Score = 125 bits (138), Expect = 9e-24 Identities = 110/137 (80%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 62388 ACTTGGAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACC 62447 || || |||||||| ||||| ||||| |||||||| ||||| |||||||| ||||| | Sbjct 71644 ACCTGAAATTCTCCTGACAAGACTCTGCGAGTGTAGATATTGCTGGTATAAGGTTCAATG 71703 Query 62448 GACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAA 62507 ||||||||||| |||| || ||||||||||| ||||| ||||| || || | | |||| Sbjct 71704 GACTCATTATTCCCCAGGATCTGAGCAGTTGAAGCAGTAGGCATTGGGGCAATAAGTAAA 71763 Query 62508 CTATTTCTAAGACCGTA 62524 || ||||| | ||| || Sbjct 71764 CTGTTTCTTATACCATA 71780 Score = 114 bits (126), Expect = 2e-20 Identities = 108/138 (78%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 63263 CTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTTGTTCT 63322 || |||||||||||| |||||||| ||||||||||| || | || ||||| || | | Sbjct 82818 CTCCACTCGTTTCATGAAGAGATCCGGAATCCAAAGGGCAAAGAAAAGATCCCTGGCACG 82877 Query 63323 ATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCA 63382 ||||| || |||||||| ||||| || ||||| ||||| | | || || ||||||| Sbjct 82878 CTGTTCTTCCTTTCCTGTGTTCTTCTTTAGATCAAGGAAATCAAATATGTCTAAATGCCA 82937 Query 63383 CGGTTCCAAGTATATGGC 63400 ||||||||||| ||||| Sbjct 82938 GGGTTCCAAGTACATGGC 82955 Score = 111 bits (122), Expect = 2e-19 Identities = 127/171 (74%), Gaps = 0/171 (0%) Strand=Plus/Plus Query 62113 TCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATAT 62172 |||| || || || |||||||| || |||||| |||| | || || || ||||| || | Sbjct 68919 TCCAGCCATAGAAGTGCATACTAGTGAGTTTGCCATAATTAGGCTCAGCAATATGAATGT 68978 Query 62173 TCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCT 62232 ||| ||| || |||||||| ||||| || || ||||| || |||| || || || | | Sbjct 68979 TCAAAGACTGGCTTTGATCAATGAAAGCACCTCTGTCAGCTCCCATCTTGATAATGATTT 69038 Query 62233 TTTGTGCAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAA 62283 | || | |||||||| | ||||||||||| | |||| | || || |||| Sbjct 69039 TCTGAGAGATTTCCCACACAGTTTTATAAAGTTGCTTCAGGTCATCGGGAA 69089 Score = 95.1 bits (104), Expect = 2e-14 Identities = 135/190 (71%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 62626 CATATGTATCATATGGTCCTTCCTTCTCAGCTAGTTTACAACTCGCCTCTAATGCACCGT 62685 |||| || |||||||| || | || || || || | |||||| || || | ||||| | Sbjct 77764 CATAGGTTTCATATGGGCCATGCTCCTTGGCCAGGTCACAACTGGCTTCCAGGGCACCAT 77823 Query 62686 AATAAATGGTTTCAAAGATCTTCTTATTTAGATCTTGTGCTTCCGGGCTATCAAATGGAT 62745 ||||||| ||||||||||||| |||||| || || || || || || ||||| || | Sbjct 77824 AATAAATAGTTTCAAAGATCTGCTTATTCAGTAACTGGGCCTCTGGACTCTCAAAAGGGT 77883 Query 62746 AATTTAAGAGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTC 62805 | | | || ||||| || || || | ||||| || ||||| || || || | || | Sbjct 77884 ACCTCATCAGGATAAAAGCATCTGCCAGACCTTGGACCCCAATTCCAATGGGGCGGTGGC 77943 Query 62806 TCTTATTAGA 62815 ||||| || Sbjct 77944 GTTTATTTGA 77953 Score = 91.5 bits (100), Expect = 2e-13 Identities = 103/138 (75%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 63507 ATATAGCCTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTA 63566 || |||| ||| | || |||||| |||| | | | ||| |||||||| || ||| Sbjct 86102 ATGTAGCTGCCAGTAGCCCGAATACTACTCACAGCAACACCAATTCCCCCAGCAGACTTA 86161 Query 63567 GAGATTAATGCGCATCGTTTTAACGTGTCATAGATGCCTTCTATGCTATCATCGATCATG 63626 ||||| ||||| || | |||| || ||||| |||||||| ||||||||||| |||| Sbjct 86162 GAGATCAATGCACACTGCTTTAGAGTATCATAAATGCCTTCAATGCTATCATCTTTCATA 86221 Query 63627 TTAAGTAGAAAACAGCTA 63644 | || |||||||||||| Sbjct 86222 CTCAGAAGAAAACAGCTA 86239 >seq303989 Length=535067 Score = 111 bits (122), Expect = 2e-19 Identities = 97/121 (80%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 33604 CCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 33663 |||| ||||| ||||| | ||| || ||||| ||||| || ||||| || || || || | Sbjct 320200 CCTCATCTCTGCTAATAAGTTCATTGGAAAATGTGAGGCCAGGCATCAGTCCTCGTTTCT 320141 Query 33664 TAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTCCTTCTACTGCAGCAAAGG 33723 | ||||| ||||| || || || || || ||||||||||| ||||| ||||||||||||| Sbjct 320140 TGAGCCAGAATATCGATGCAAAAGAACCAGAAAAGAAGATGCCTTCCACTGCAGCAAAGG 320081 Query 33724 C 33724 | Sbjct 320080 C 320080 >seq96983 Length=126056 Score = 98.7 bits (108), Expect = 1e-15 Identities = 93/119 (78%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 33606 TCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTA 33665 || ||||| || || | ||| || ||||| ||||| || ||||| || || | ||| || Sbjct 32463 TCATCTCTGCTGATGAGTTCATTGGAAAAAGTGAGCCCAGGCATAAGACCTCTCTTCTTT 32404 Query 33666 AGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTCCTTCTACTGCAGCAAAGGC 33724 ||||| ||||| | ||| || ||||| || ||||| |||||||| || ||||||||||| Sbjct 32403 AGCCAGAATATAGCAGCAAAAGATCCCGAGAAGAAAATTCCTTCCACAGCAGCAAAGGC 32345 Score = 84.2 bits (92), Expect = 3e-11 Identities = 84/109 (77%), Gaps = 0/109 (0%) Strand=Plus/Minus Query 33966 AAATTTTCATTCACTATTCCATCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAA 34025 || |||||||| || ||||||||||||||||||||||| ||||| | || ||||||| Sbjct 23315 AAGTTTTCATTTACAATTCCATCACTGGCTGCAAAAAAGGCCAAAATGTGAGATATAAAA 23256 Query 34026 TATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTGATATCTTTAGATA 34074 || || || |||| | | || || ||||| | | || ||| || |||| Sbjct 23255 TACTTCTCCTCTGATTTAAGCTTGTTCCAGTGAGGGAGATCCTTTGATA 23207 >seq313520 Length=1331321 Score = 89.7 bits (98), Expect = 6e-13 Identities = 91/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 188489 GTTACTTTCTATGATGCGCGTATCGTTATACAAGCTTTCATGTTGACTACTGCAGTGTTT 188548 |||||||||||||| || || || | |||||||| || |||| ||| |||| || Sbjct 95147 GTTACTTTCTATGACATACGGATTATTCTGCAAGCTTTTATACTGACGACTACAGTATTC 95206 Query 188549 CTTGCTCTGACTACATGTACTCTACAATCAAAGAGAGATTTCAGTAAACTTGTAACAGG 188607 |||||| ||||| | | ||||| ||||| |||||||| ||||| ||| ||| | |||| Sbjct 95207 CTTGCTTTGACTGCCTACACTCTCCAATCCAAGAGAGACTTCAGCAAATTTGGAGCAGG 95265 Score = 84.2 bits (92), Expect = 3e-11 Identities = 60/69 (87%), Gaps = 0/69 (0%) Strand=Plus/Plus Query 188387 GGCTTGATTTTCGCATTGACTTTACACAGACATAAACATCCCCTGAATCTGTACCTACTT 188446 ||||||||||| || |||||| ||||||||||||| ||||||| || |||||||| ||| Sbjct 88593 GGCTTGATTTTTGCCTTGACTCTACACAGACATAAGTATCCCCTCAACCTGTACCTGCTT 88652 Query 188447 TGTGGATTT 188455 | ||||||| Sbjct 88653 TTTGGATTT 88661 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 627163005415920