Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Carlito_20syrichta_20[refseq_20GCF_5F000164805.1_202013-09-18] 337,189 sequences; 3,453,864,774 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq314877 96.9 2e-15 >seq314877 Length=772221 Score = 96.9 bits (106), Expect = 2e-15 Identities = 112/150 (75%), Gaps = 1/150 (1%) Strand=Plus/Plus Query 25506 GCCATCATGTACGTGAGGAGAAAGTAGCTGGCGATGTTAAAGGGTACCCCGAACCCCATG 25565 || |||||||| ||||| || |||||||||||||| || ||||| || | |||||| Sbjct 564783 GCGATCATGTATGTGAGCAGGGCATAGCTGGCGATGTTGAAAGGTACACCCAGGCCCATG 564842 Query 25566 TCCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTTCGTCGCTCACGTAAAACTGACA 25625 | | || ||||||||||| ||||| || || ||||| ||| |||||| ||||| || Sbjct 564843 T-CTCCTGACCTCTGGTACAGCTGGCAGGACAGCTCACCGTTCACCACGTAGAACTGGCA 564901 Query 25626 CATGGTGTAGCACGGAGGAAGAGCTATAAG 25655 | || | ||| ||||| || || || || Sbjct 564902 GAGGGCATGGCATGGAGGCAGCGCCATCAG 564931 Score = 89.7 bits (98), Expect = 3e-13 Identities = 121/169 (72%), Gaps = 0/169 (0%) Strand=Plus/Plus Query 25772 TCATGTCCGTGTACTCTGCTCCGAAATACCTCCACTGGAACCCGTACACCGGTCCTAGGT 25831 |||| || |||| ||||| || |||| |||||| ||||| || || || || || | | Sbjct 568616 TCATATCTTTGTATTCTGCCCCAAAATGCCTCCATTGGAAGCCATAGACAGGGCCCAAAT 568675 Query 25832 CTCCATCTTCCCTGTGCTCAAAGCCCCTCTTATCCAAAAAGTCTCTGGAACCATTGGCGT 25891 |||| ||||| ||| || || ||||||||||||| ||| |||||||| | Sbjct 568676 CTCCTTCTTCTCTGGTGGAGAATCCTAGGCAGTCCAAAAAGTCTCGGGATCCATTGGCAT 568735 Query 25892 CCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCC 25940 ||||||| || || ||||| || || ||||| | |||||||| || Sbjct 568736 CCCAGATTTTCACTCCCTTAGAAGACAGTTCTTTAGCATTTGTGGATCC 568784 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338739807615297