Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Carlito_20syrichta_20[refseq_20GCF_5F000164805.1_202013-09-18] 337,189 sequences; 3,453,864,774 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq303727 84.2 2e-11 seq126465 84.2 2e-11 seq308817 82.4 7e-11 >seq303727 Length=1188818 Score = 84.2 bits (92), Expect = 2e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 26862 GACAAAGAAGGGATACCTCCCGATCAACAAAGACTCATTTACGGCGGCAAACAACTCGAA 26921 || || ||||| || ||||| ||||| |||||||| || | | ||||| ||||| ||| Sbjct 949377 GATAAGGAAGGAATTCCTCCTGATCAGCAAAGACTGATCTTTGCTGGCAAGCAACTGGAA 949436 Query 26922 GATGATAGAAACGTCAGCGACTATAACATTCAAAAAGAATCTACTATCCATCTGGTCCTG 26981 |||| | | | ||||| ||||||||||| ||||||||| | ||||| || || Sbjct 949437 GATGGACGTACTCTGTCTGACTACAACATTCAAAAGGAATCTACTCTTCATCTTGTGTTG 949496 Query 26982 AGACTTAGAGGAGG 26995 |||||| | || || Sbjct 949497 AGACTTCGTGGTGG 949510 >seq126465 Length=199800 Score = 84.2 bits (92), Expect = 2e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 26862 GACAAAGAAGGGATACCTCCCGATCAACAAAGACTCATTTACGGCGGCAAACAACTCGAA 26921 || || ||||| || ||||| ||||| |||||||| || | | ||||| ||||| ||| Sbjct 38965 GATAAGGAAGGAATTCCTCCTGATCAGCAAAGACTGATCTTTGCTGGCAAGCAACTGGAA 39024 Query 26922 GATGATAGAAACGTCAGCGACTATAACATTCAAAAAGAATCTACTATCCATCTGGTCCTG 26981 |||| | | | ||||| ||||||||||| ||||||||| | ||||| || || Sbjct 39025 GATGGACGTACTCTGTCTGACTACAACATTCAAAAGGAATCTACTCTTCATCTTGTGTTG 39084 Query 26982 AGACTTAGAGGAGG 26995 |||||| | || || Sbjct 39085 AGACTTCGTGGTGG 39098 >seq308817 Length=568824 Score = 82.4 bits (90), Expect = 7e-11 Identities = 102/136 (75%), Gaps = 4/136 (3%) Strand=Plus/Minus Query 26862 GACAAAGAAGGGATACCTCCCGATCAACAAAGACTCATTTACGGCGGCAAACAACTCGAA 26921 || || ||||| || ||||| ||||| ||||||| |||| | ||||| ||||| ||| Sbjct 130033 GATAAGGAAGGAATTCCTCCTGATCAGCAAAGACCAATTTTTGCTGGCAAGCAACTGGAA 129974 Query 26922 GATG-ATAGAAAC-GTCAGCGACTATAACATTCAAAAAGAATCTACTATCCATCTGGTCC 26979 |||| || | | ||| | |||| ||||||||||| || |||||| | ||||| || Sbjct 129973 GATGGATGTACATTGTCTG--ACTACAACATTCAAAAGGAGTCTACTCTTCATCTTGTGT 129916 Query 26980 TGAGACTTAGAGGAGG 26995 |||||||| | || || Sbjct 129915 TGAGACTTTGTGGTGG 129900 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476644903800080