Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Carlito_20syrichta_20[refseq_20GCF_5F000164805.1_202013-09-18] 337,189 sequences; 3,453,864,774 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq303727 95.1 1e-14 seq131556 93.3 4e-14 seq126465 91.5 1e-13 seq305757 89.7 4e-13 seq308817 87.8 2e-12 seq309042 86.0 5e-12 seq92613 84.2 2e-11 seq308087 82.4 6e-11 >seq303727 Length=1188818 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 115283 AAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCC 115342 || ||||| ||||| | ||||| || ||||| || ||||| ||| |||| || || Sbjct 949281 AAGATGCAGATTTTCATGAAAACCCTTACGGGGAAGACCATCACCCTCGAGGTTGAACCC 949340 Query 115343 AGCGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGAT 115402 || || | | | | ||||| || || ||||| ||||| | || |||| Sbjct 949341 TCGGATACAATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGAT 949400 Query 115403 CAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTAT 115462 ||||||||||| || | ||| ||||| ||| | ||||||| || || | || || Sbjct 949401 CAGCAAAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTCTGTCTGACTAC 949460 Query 115463 AACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 ||||||||||| || |||||| | ||| | ||||||||| | || || || Sbjct 949461 AACATTCAAAAGGAATCTACTCTTCATCTTGTGTTGAGACTTCGTGGTGG 949510 >seq131556 Length=230148 Score = 93.3 bits (102), Expect = 4e-14 Identities = 160/231 (69%), Gaps = 10/231 (4%) Strand=Plus/Plus Query 115287 TGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGA-----AACGGAGTC 115341 |||| ||||| | ||||| || || || || ||||| || |||| ||| || Sbjct 29212 TGCAGATTTTCATGAAAACCCTTACCGGGAAGACCATCACTCTCGAGGTTCAACC---TC 29268 Query 115342 CAGCGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGA 115401 ||| |||| || | | | ||||| || || ||||| ||||| | || ||| Sbjct 29269 CAG--ACACAGTAGAAAATGTAAAGACCAAGATCCAAGATAAGGAAGGAATTCCTCCTGA 29326 Query 115402 TCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTA 115461 |||||||||||| || | ||| ||||| ||| | ||||||| || || | || || Sbjct 29327 TCAGCAAAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGATGTACTCTGTCTGACTA 29386 Query 115462 TAACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 ||||||||||| ||||||||| | ||| | ||||||||| | || || || Sbjct 29387 CAACATTCAAAAGGAGTCTACTCTTCATGTTGTGTTGAGACTTCGTGGTGG 29437 >seq126465 Length=199800 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 115283 AAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCC 115342 || ||||| ||||| | ||||| || ||||| || ||||| ||| || | || || Sbjct 38869 AAGATGCAGATTTTCATGAAAACCCTTACGGGGAAGACCATCACCCTCAAGGTTGAACCC 38928 Query 115343 AGCGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGAT 115402 || || | | | | ||||| || || ||||| ||||| | || |||| Sbjct 38929 TCGGATACAATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGAT 38988 Query 115403 CAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTAT 115462 ||||||||||| || | ||| ||||| ||| | ||||||| || || | || || Sbjct 38989 CAGCAAAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTCTGTCTGACTAC 39048 Query 115463 AACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 ||||||||||| || |||||| | ||| | ||||||||| | || || || Sbjct 39049 AACATTCAAAAGGAATCTACTCTTCATCTTGTGTTGAGACTTCGTGGTGG 39098 >seq305757 Length=1147529 Score = 89.7 bits (98), Expect = 4e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||| |||||||| || || || || || || ||||| ||| | ||| ||| | || Sbjct 1142246 ATGCAGATTTTTGTGAAGACCCTGACCGGCAAGACCATCACCCTAGAAGTTGAGCCTAGT 1142305 Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405 || || ||| | | || || || || |||||||||||| |||| ||| ||| Sbjct 1142306 GATACCATTGAAAACGTGAAGGCTAAGATCCAGGATAAAGAAGGCATCCCTCCTGACCAG 1142365 Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465 || || || |||| ||| ||||| || | ||||||| | || | | ||||| ||| Sbjct 1142366 CAGAGGCTCATTTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGATTACAAC 1142425 Query 115466 ATTCAAAAAGAGTCTAC 115482 ||||| |||||||| || Sbjct 1142426 ATTCAGAAAGAGTCGAC 1142442 >seq308817 Length=568824 Score = 87.8 bits (96), Expect = 2e-12 Identities = 93/123 (76%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 115379 GATAAAGAAGGCGTCCCCGTTGATCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAA 115438 ||||| ||||| | || |||||||||||||| |||| ||| ||||| ||| | ||| Sbjct 130033 GATAAGGAAGGAATTCCTCCTGATCAGCAAAGACCAATTTTTGCTGGCAAGCAACTGGAA 129974 Query 115439 GATGACAAAACCATGGCCGATTATAACATTCAAAAAGAGTCTACTATACATATGGTGTTG 115498 |||| || || | || || ||||||||||| ||||||||| | ||| | |||||| Sbjct 129973 GATGGATGTACATTGTCTGACTACAACATTCAAAAGGAGTCTACTCTTCATCTTGTGTTG 129914 Query 115499 AGA 115501 ||| Sbjct 129913 AGA 129911 >seq309042 Length=1952097 Score = 86.0 bits (94), Expect = 5e-12 Identities = 84/106 (79%), Gaps = 2/106 (2%) Strand=Plus/Plus Query 115399 TGATCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGAT-GACAAAACCATGGCCG 115457 ||||||||||||||| |||| ||| ||||| ||| | |||||| |||| | | || | | Sbjct 293169 TGATCAGCAAAGACTGATTTTTGCTGGCAAGCAACTGGAAGATGGACATATTC-TGTCTG 293227 Query 115458 ATTATAACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATT 115503 | || ||||||||||| ||| ||||| | || | ||||||||||| Sbjct 293228 ACTACAACATTCAAAAGGAGCCTACTTTTCACCTTGTGTTGAGATT 293273 >seq92613 Length=686304 Score = 84.2 bits (92), Expect = 2e-11 Identities = 87/114 (76%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 115399 TGATCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGA 115458 ||||||||||||||| || | ||| ||||| || | ||||||| | || || | || Sbjct 590027 TGATCAGCAAAGACTGATCTTTGCTGGCAAGAAACTGGAAGATGGACATACTCTGTCTGA 590086 Query 115459 TTATAACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 || ||||||||||| ||||||||| | ||| | ||||||||| | || || || Sbjct 590087 CTACAACATTCAAAAGGAGTCTACTCTTCATCTTGTGTTGAGACTTCGTGGTGG 590140 >seq308087 Length=671593 Score = 82.4 bits (90), Expect = 6e-11 Identities = 92/123 (75%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 115379 GATAAAGAAGGCGTCCCCGTTGATCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAA 115438 ||||| ||||| | || ||||||||||||||| || | ||| ||||| ||| | ||| Sbjct 466464 GATAAGGAAGGAATTCCTCCTGATCAGCAAAGACTGATCTTTGCTGGCAAGCAACTGGAA 466405 Query 115439 GATGACAAAACCATGGCCGATTATAACATTCAAAAAGAGTCTACTATACATATGGTGTTG 115498 |||| | || || | || || |||||||| || |||||||| | ||| | |||||| Sbjct 466404 GATGGACATACTCTGTCTGACTACAACATTCACAAGAAGTCTACTCTTCATCTTGTGTTG 466345 Query 115499 AGA 115501 ||| Sbjct 466344 AGA 466342 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 423596052686680