Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Carlito_20syrichta_20[refseq_20GCF_5F000164805.1_202013-09-18] 337,189 sequences; 3,453,864,774 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq100879 125 7e-24 seq305757 122 8e-23 seq314340 100 3e-16 seq169768 96.9 3e-15 seq302728 93.3 4e-14 seq316040 91.5 1e-13 seq303727 86.0 6e-12 seq316284 82.4 7e-11 >seq100879 Length=438 Score = 125 bits (138), Expect = 7e-24 Identities = 165/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 131006 AGCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGC 131065 ||||||| | || ||| || || | || | ||||||||| || |||||||||||||| Sbjct 206 AGCCACCCCTCAGACGAAGAACCAGGTGCAGGGTCGACTCTTTCTGAATGTTGTAATCAG 265 Query 131066 TCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAG 131125 | ||||| || || |||||||||||||| |||| | | ||||||||| |||| Sbjct 266 AAAGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGAG 325 Query 131126 GGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGA 131185 |||| |||||||| || ||| || ||| | | ||| | ||||| ||| ||| | Sbjct 326 GGATGCCTTCTTTATCCTGGATCTTGGCCTTCACATTCTCGATGGTATCACTGGGCTCAA 385 Query 131186 TGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||| | ||| || ||||| || || || || ||||||||||| Sbjct 386 CTTCTAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACAAAAATCTGCAT 434 >seq305757 Length=1147529 Score = 122 bits (134), Expect = 8e-23 Identities = 172/241 (71%), Gaps = 3/241 (1%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| | || |||||| || | || | ||| ||||| || || ||||||||||| Sbjct 1142244 CCACCTCTCAGACGCAGGACCAGGTGCAGGGTTGACTCTTTCTGGATGTTGTAATCAGAA 1142185 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| || || |||||||||||||| |||| | | ||||||||| |||||| Sbjct 1142184 AGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGAGGG 1142125 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || |||||||| || ||| || ||| | | ||| | ||||| ||| ||| | Sbjct 1142124 ATGCCTTCTTTATCCTGGATCTTGGCCTTCACATTCTCGATGGTATCACTGGGCTCAACC 1142065 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCA---TGACTTATTTT 131244 || | ||| | ||| || ||||| || ||||| ||||| ||||||| |||| || ||| Sbjct 1142064 TCTAGGGTGATGGTCTTGCCGGTCAGGGTTTTCACGAAGATCTGCATTTTGACCTAGTTT 1142005 Query 131245 A 131245 | Sbjct 1142004 A 1142004 Score = 111 bits (122), Expect = 1e-19 Identities = 162/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 131006 AGCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGC 131065 ||||||| | || ||| || || | || | ||||||||| || |||||||||||||| Sbjct 1142474 AGCCACCCCTCAGACGAAGAACCAGGTGCAGGGTCGACTCTTTCTGAATGTTGTAATCAG 1142415 Query 131066 TCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAG 131125 | ||||| || || |||||||||||||| | || | | ||||||||| |||| Sbjct 1142414 AAAGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAAATGAGCCTCTGCTGGTCAGGAG 1142355 Query 131126 GGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGA 131185 |||| |||||||| || ||| || ||| | | || | ||||| | | ||| | Sbjct 1142354 GGATGCCTTCTTTATCCTGGATCTTAGCCTTCACGTTTTCAATGGTATCACTAGGCTCAA 1142295 Query 131186 TGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||| | ||| || ||||| || || || || ||||||||||| Sbjct 1142294 CTTCTAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACAAAAATCTGCAT 1142246 >seq314340 Length=1169179 Score = 100 bits (110), Expect = 3e-16 Identities = 167/235 (71%), Gaps = 5/235 (2%) Strand=Plus/Minus Query 131003 ATGA-GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAA 131061 |||| |||||| |||| |||||||| | || | ||| ||||| || || |||||||| Sbjct 629765 ATGATGCCACCTCGCAGGCGCAGCACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAG 629706 Query 131062 TCGCTCATGGTGC-GCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTC 131120 || | |||| || | ||||| ||||| ||||| || | || | |||||||||||| Sbjct 629705 TCTGAAAGAGTGCAGCCA-TCCTCCAGCTGTTTGCCCGCAAATATCAGACGCTGCTGGTC 629647 Query 131121 CGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGC-TTGAGCTGCTCCACAGTATCGGTGG 131179 || ||||| || || ||||| || |||| || |||| | ||| | || || ||| Sbjct 629646 AGGTGGGATGCCCTCCTTGTC-TTGGATTTCAGCTTTGACATTCTCTATGGTGTCACTGG 629588 Query 131180 ACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 ||| | || | ||| | || || || || || || || ||||| |||||||| Sbjct 629587 GCTCAACTTCAAGGGTGATTGTCTTGCCCGTGAGGGTCTTCACGAAGATCTGCAT 629533 >seq169768 Length=302843 Score = 96.9 bits (106), Expect = 3e-15 Identities = 161/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 131006 AGCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGC 131065 ||||||| | || | | || || | || | ||| ||||| || || ||||||||||| Sbjct 108899 AGCCACCCCTCAGATGGAGGACCAGGTGCAGGGTTGACTCTTTCTGGATGTTGTAATCAG 108958 Query 131066 TCATGGTGC-GCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGA 131124 | |||| || | || || |||||||||||||| | || | | ||||||||| || Sbjct 108959 AAAGAGTGCAGCCA-TCTTCCAGCTGCTTGCCTGCAGAAATGAGCCTCTGCTGGTCGAGA 109017 Query 131125 GGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCG 131184 ||||| |||||||| || ||| || ||| | | ||| | ||||| ||| ||| Sbjct 109018 GGGATGCCTTCTTTATCATGGATCTTGGCCTTCACATTCTCAATGGTATCACTGGGCTCA 109077 Query 131185 ATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 | | | ||| | ||| || | ||| || ||||| ||||| |||||||| Sbjct 109078 ACCTGTAGGGTGATGGTCTTGCTGGTCAGGGTTTTCACGAAGATCTGCAT 109127 >seq302728 Length=1132070 Score = 93.3 bits (102), Expect = 4e-14 Identities = 160/231 (69%), Gaps = 1/231 (0%) Strand=Plus/Plus Query 131003 ATGA-GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAA 131061 |||| |||||| | || | |||||| | || | ||| ||||| || || |||||||| Sbjct 600819 ATGATGCCACCTCTCAGGCACAGCACCAGGTGCAGGGTGGACTCTTTGTGGATGTTGTAT 600878 Query 131062 TCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCC 131121 || | ||||| ||||| ||||| |||||||| | || | |||||||||||| Sbjct 600879 TCTGAAAGAGTGCGACCATCCTCCAGCTGTTTGCCTGCAAATATCAGACGCTGCTGGTCA 600938 Query 131122 GGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGAC 131181 || ||||| || || ||||| |||||| |||| | ||| | || || ||| | Sbjct 600939 GGTGGGATGCCCTCCTTGTCTTGGATTTTAGCTTTGACATTCTCGATGGTGTCACTGGGC 600998 Query 131182 TCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGC 131232 || | || | ||| | || || || || || || || ||||| |||||| Sbjct 600999 TCAACTTCAAGGGTGATTGTCTTGCCTGTGAGGGTCTTCACGAAGATCTGC 601049 >seq316040 Length=1005281 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 |||||| |||| |||||||| | || | ||| ||||| || || |||||||| || Sbjct 910481 GCCACCTCGCAGGCGCAGCACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCTGA 910422 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | ||||| ||||| ||||| ||||| || | || | |||||||||||| || || Sbjct 910421 AAGAGTGCGGCCATCCTCCAGCTGTTTGCCCGCAAATATCAGACGCTGCTGGTCAGGTGG 910362 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 || || || ||||| |||||| |||| | ||| | || || ||| ||| | Sbjct 910361 AATGCCCTCCTTGTCTTGGATTTTAGCTTTGACATTCTCGATGGTGTCACTGGGCTCCAC 910302 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||| | || || || || || || || | ||| |||||||| Sbjct 910301 TTCAAGGGTGATTGTCTTGCCCGTGAGGGTCTTCATGAAGATCTGCAT 910254 >seq303727 Length=1188818 Score = 86.0 bits (94), Expect = 6e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | | || ||| | ||| | || || ||||||||||||||||| || | Sbjct 949510 CCACCACGAAGTCTCAACACAAGATGAAGAGTAGATTCCTTTTGAATGTTGTAGTCAGAC 949451 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || || || || || |||||||| || |||| | | ||||| || ||||| Sbjct 949450 AGAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGA 949391 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 |||||||| || || ||| || ||| | | || | ||||| | || || | Sbjct 949390 ATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTCAACC 949331 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| ||| | ||| || || || || ||||| | |||||||||||| Sbjct 949330 TCGAGGGTGATGGTCTTCCCCGTAAGGGTTTTCATGAAAATCTGCAT 949284 >seq316284 Length=490044 Score = 82.4 bits (90), Expect = 7e-11 Identities = 74/93 (80%), Gaps = 0/93 (0%) Strand=Plus/Plus Query 145675 TACGATCTCGGCGCACAAATTGCTACATTTGATGGTTCCCAGATTTTGCTGATTACTTTT 145734 || ||| || | |||| |||||| |||||||||||||| | || ||||| || ||||| Sbjct 81501 TATGATTTCTGTACACAGATTGCTGCATTTGATGGTTCCTATGTTCTGCTGGTTGCTTTT 81560 Query 145735 CCTGTTGCACGCGTCCTTGTAGAGCATGTACGG 145767 || || || || || ||||||||||||||||| Sbjct 81561 CCGATTACAGGCATCTTTGTAGAGCATGTACGG 81593 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 470023330949760