Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Carlito_20syrichta_20[refseq_20GCF_5F000164805.1_202013-09-18] 337,189 sequences; 3,453,864,774 total letters Query= NC_015323.1 Length=45667 Score E Sequences producing significant alignments: (Bits) Value seq308646 80.6 8e-11 >seq308646 Length=105333 Score = 80.6 bits (88), Expect = 8e-11 Identities = 89/117 (76%), Gaps = 4/117 (3%) Strand=Plus/Plus Query 984 TTATGGGAGAATCGCTCCTCGCTCGGGATTGGCTGCAAAGTTCTTTATAGATGTGGGGGC 1043 |||||| ||| | ||||| || || || ||||||||||| |||||||||||| || || Sbjct 84358 TTATGGAAGAGTAGCTCCACGTTCTGGCTTGGCTGCAAAACACTTTATAGATGTAGGAGC 84417 Query 1044 GGGTGTGATAGATGCTGATTATCGCGGTGAAGTGAAGGTGCTCT--TGTTCAATTTT 1098 ||||| ||||||| |||||| | | ||| || |||| | | |||| |||||| Sbjct 84418 TGGTGTCATAGATGAAGATTATAGAG--GAAATGTTGGTGTTGTGCTGTTTAATTTT 84472 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 145428147318522