Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Carlito_20syrichta_20[refseq_20GCF_5F000164805.1_202013-09-18] 337,189 sequences; 3,453,864,774 total letters Query= NC_019559.1 Length=202946 Score E Sequences producing significant alignments: (Bits) Value seq236152 105 9e-18 >seq236152 Length=34290 Score = 105 bits (116), Expect = 9e-18 Identities = 134/183 (73%), Gaps = 1/183 (1%) Strand=Plus/Minus Query 113419 GAACAGTCGTTTGCATCGGAACTCTACTTCCTTTAGGACATACTGGGAGACGTGTTTCTG 113478 ||||| |||| ||||| || || ||||| ||| | ||||| || || || |||||||| Sbjct 29204 GAACATTCGTCTGCATTTAAAGTCAACTTCTTTT-GAACATAGTGAGAAACATGTTTCTG 29146 Query 113479 ATGTGCCACGTAACCTATACTGATGCCTATTATATTTTTTAACAGGAAACATATAACGGG 113538 |||||| || || ||||| | || || ||||||||| || | || || || | || Sbjct 29145 ATGTGCTACATATCCTATGTTTATACCGTGTATATTTTTCAATAAAAAGCAAATGATTGG 29086 Query 113539 GATGGTAAACCACGTTTTTCCATGGCGTCTCGGTACTAAGAAGACGGTTGCTTTTTGTTT 113598 | ||||||| |||||||| || | ||| |||||||| || || ||||||| || || Sbjct 29085 AACAATAAACCAGGTTTTTCCGTGTCTTCTAGGTACTAAAAAAACACTTGCTTTCTGCTT 29026 Query 113599 GAA 113601 || Sbjct 29025 TAA 29023 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 646562493150640