Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Carlito_20syrichta_20[refseq_20GCF_5F000164805.1_202013-09-18] 337,189 sequences; 3,453,864,774 total letters Query= NC_019945.1 Length=132978 Score E Sequences producing significant alignments: (Bits) Value seq303727 86.0 5e-12 seq126465 82.4 6e-11 >seq303727 Length=1188818 Score = 86.0 bits (94), Expect = 5e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 28551 AAAATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCT 28610 || ||||| || || | ||||| | ||||| || ||||| ||| ||| ||||| Sbjct 949281 AAGATGCAGATTTTCATGAAAACCCTTACGGGGAAGACCATCACCCTCGAGGTTGAACCC 949340 Query 28611 TCAGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGAT 28670 || || || | | || | ||| || ||| || || || ||| | || ||| Sbjct 949341 TCGGATACAATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGAT 949400 Query 28671 CAACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTAT 28730 || || ||||| |||||||| ||||| ||| |||||||| ||| || | || || Sbjct 949401 CAGCAAAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTCTGTCTGACTAC 949460 Query 28731 AACATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGG 28780 ||||||||||| ||||||||||| || | || || ||| | || || || Sbjct 949461 AACATTCAAAAGGAATCTACTCTTCATCTTGTGTTGAGACTTCGTGGTGG 949510 >seq126465 Length=199800 Score = 82.4 bits (90), Expect = 6e-11 Identities = 156/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 28551 AAAATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCT 28610 || ||||| || || | ||||| | ||||| || ||||| ||| | | ||||| Sbjct 38869 AAGATGCAGATTTTCATGAAAACCCTTACGGGGAAGACCATCACCCTCAAGGTTGAACCC 38928 Query 28611 TCAGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGAT 28670 || || || | | || | ||| || ||| || || || ||| | || ||| Sbjct 38929 TCGGATACAATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGAT 38988 Query 28671 CAACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTAT 28730 || || ||||| |||||||| ||||| ||| |||||||| ||| || | || || Sbjct 38989 CAGCAAAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTCTGTCTGACTAC 39048 Query 28731 AACATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGG 28780 ||||||||||| ||||||||||| || | || || ||| | || || || Sbjct 39049 AACATTCAAAAGGAATCTACTCTTCATCTTGTGTTGAGACTTCGTGGTGG 39098 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 423656602829631