Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Carlito_20syrichta_20[refseq_20GCF_5F000164805.1_202013-09-18] 337,189 sequences; 3,453,864,774 total letters Query= NC_020231.1 Length=233501 Score E Sequences producing significant alignments: (Bits) Value seq236152 87.8 3e-12 >seq236152 Length=34290 Score = 87.8 bits (96), Expect = 3e-12 Identities = 130/183 (71%), Gaps = 1/183 (1%) Strand=Plus/Minus Query 150335 GAACATCCGTCGGCATCTGAATTCCACCTCCTTGAGGACGAACTGCGAGACGTGTTTCTG 150394 |||||| |||| |||| | || || || || || | || | || || || |||||||| Sbjct 29204 GAACATTCGTCTGCATTTAAAGTCAACTTCTTTT-GAACATAGTGAGAAACATGTTTCTG 29146 Query 150395 ATGCGCGACGTATCCTATGCTGATCCCTATGATGTTCTTCAGCAAGAAGCATATGATGGG 150454 ||| || || ||||||||| | || || || || |||| || ||||| ||||| || Sbjct 29145 ATGTGCTACATATCCTATGTTTATACCGTGTATATTTTTCAATAAAAAGCAAATGATTGG 29086 Query 150455 GATCATGAACCACGTCTTACCGTGTCTCCTCGGGACGAGGAACACCGTGGCTTTCTGTTT 150514 | || ||||| || || |||||||| || || || | || || | |||||||| || Sbjct 29085 AACAATAAACCAGGTTTTTCCGTGTCTTCTAGGTACTAAAAAAACACTTGCTTTCTGCTT 29026 Query 150515 GAA 150517 || Sbjct 29025 TAA 29023 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 743926380754840