Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Carlito_20syrichta_20[refseq_20GCF_5F000164805.1_202013-09-18] 337,189 sequences; 3,453,864,774 total letters Query= NC_028238.1 Length=188534 Score E Sequences producing significant alignments: (Bits) Value seq315083 84.2 3e-11 >seq315083 Length=341198 Score = 84.2 bits (92), Expect = 3e-11 Identities = 193/291 (66%), Gaps = 0/291 (0%) Strand=Plus/Plus Query 22643 TATTTCTGGATGCGCTATTTTTTCAAATATAAGTTGTGCTACTCTATCGCCCTTATTTAC 22702 ||||||||||| ||| |||| | || || || | | || || || || || || Sbjct 124890 TATTTCTGGATAAAAAATTCGTTCACAAATGAGCTGCGTAATTCGGTCACCTTTTTTGAC 124949 Query 22703 GTAAAATACATCCTTACTAAAATTAAATAACAATATACCTATATTTCCCCTGTAATCTCT 22762 | ||| | || || | ||||||||| | | | ||| | |||||| | |||||| Sbjct 124950 TTCAAACTCTTCTTTGCCAAAATTAAACAGTACAACACCAACATTTCCTGTATAATCTTC 125009 Query 22763 ATCTATCACACCCGCGCCTACATCGATAAAATGATTACATGCCAATCCCGATCTAGGAGA 22822 |||| | ||||| || |||||||| ||||| || || ||||| || || | |||| Sbjct 125010 ATCTGTGACACCAGCTCCTACATCTATAAAGTGTTTTGCAGCCAAGCCAGAACGTGGAGC 125069 Query 22823 TATTCTTCCATATAATCCTTCCGGTATATCTATTATAATATCAGTCATTACTAATTGTTT 22882 || ||||||||| | || || | | |||| ||| || || | || | ||| Sbjct 125070 TACTCTTCCATAACACCCAGAAGGAAGAGCTATCTGAATGTCCGTTTTCACAAGAGCTTT 125129 Query 22883 ACCCATAGGTTCTATTACGTAATTATACGCGCTATATAGATCATATCCTGC 22933 |||||||| |||| |||| ||| || || || || ||||| || || Sbjct 125130 CTCCATAGGTGGTATTGTATAATCATAGGCACTGTACAGGTCATAGCCCGC 125180 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 600638475865360