Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cebus_20capucinus_20imitator_20[refseq_20GCF_5F001604975.1_202016-
04-04] 7,156 sequences; 2,717,703,182 total letters
Query= NC_001611.1
Length=185578
Score E
Sequences producing significant alignments: (Bits) Value
seq526 354 1e-92
seq630 307 1e-78
seq28 232 8e-56
seq867 123 3e-23
seq2 120 4e-22
seq80 113 5e-20
seq57 111 2e-19
>seq526
Length=1402496
Score = 354 bits (392), Expect = 1e-92
Identities = 651/942 (69%), Gaps = 24/942 (3%)
Strand=Plus/Plus
Query 23788 TTTAAAAGTCAACATCTAAAGAAAAATGATTGTCTTCTTGA---GACATAACTCCCATTT 23844
|||| || ||| || | || | |||| ||| ||| | || ||||| ||||||||
Sbjct 113332 TTTAGAAATCAGCACCCAAGGTAAAAGAATTCTCTGTTGGACTTGACATCACTCCCATCC 113391
Query 23845 TTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTTT 23904
| || || || || || | || || || || ||||| || ||||| | ||| ||||| |
Sbjct 113392 TCTGATACTCGCCTACTCTCTTCTCAAAGAAGTTAGTCTTTCCTTCCAGTGAAATATTCT 113451
Query 23905 CCATGAAATCGGATGGATTGGTAACATTATAGATTCTTT--TAAATCCCAATTCAGAAAT 23962
|||| || || ||||||| | || | | | || |||| |||| ||| ||
Sbjct 113452 CCATAAAGTCAAATGGATTCTCTA--TTCTGAAAACCTTGCTAAAACCCAGTTCCAGCAT 113509
Query 23963 CAATCTATCTGCGACAAACTCCATATATGTTTTCATCATTTCACAATTCATTCCTATAAG 24022
||| ||||| |||||||| || ||| ||||| | |||||||| || || ||
Sbjct 113510 G--TCTGTCTGCCACAAACTCAATGTATTGCTTCATTAGAGTGCAATTCATCCCAATGAG 113567
Query 24023 TTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTA-TAA 24081
| || || | ||| |||||||||| |||||||| || || || | || || | |
Sbjct 113568 CTCCACAGGCAAGGCCTCAGTAAGAAACTCTTGTTCTATCCGAACAGCAT-TGATAGTTA 113626
Query 24082 TAGATCTTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACATGCGA 24141
| ||||||| | || || ||| | | || ||||| ||||||| || || |
Sbjct 113627 TTTCTCTTACTCTCTCCTCTGATGGTTTGTGTACTAGGTGTTTGAACATCAGGCAAGCAA 113686
Query 24142 AATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCA 24201
||| |||||| |||||| ||||| |||| | || | ||||| ||||| || ||||
Sbjct 113687 AATGTGAGTGTAAACCCTCATCTCTGCTAAAAAGGTCATGAGAAAATGTGAGGCCAGGCA 113746
Query 24202 TTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTT 24261
| || || | || || ||||| |||||||| ||||| || ||||||||| | || ||||
Sbjct 113747 TCAGTCCTCATTTCTTGAGCCAGAATATGGATGCAAAAGAACCAGAAAAGTAGATGCCTT 113806
Query 24262 CTACTGCCGCAAAGGCAATAAGTCTTTCTCCATA---ACCGGCGCTGTCATGTATCCACT 24318
| ||||| |||||||| | || | ||| ||||| | | | |||| |||||
Sbjct 113807 CCACTGCAGCAAAGGCTACAACGCGTTCACCATAGGTAGCCTCTTTGTCCCCAATCCAGC 113866
Query 24319 TTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGAT 24378
|||||||| |||||||| || ||||||||||| || || || ||||| ||||||
Sbjct 113867 GCAAGGCCCAATCTGCCTTCTTGTTGACACAAGGCATCGTTTCAATGGCATTGAAGAGAA 113926
Query 24379 AGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAAT 24438
| | ||||||| |||||| | || || || || | |||| ||||||||| ||||
Sbjct 113927 ATTCCCTTTCATTGGGATCTTTTATGTAAGTGTCGATAAGGAGACCATACATTTCAGAAT 113986
Query 24439 GAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCC-TCGGTAATCTGTACT 24497
| |||||||| ||||| ||||| || || |||||||| | |||| || |||||||| | |
Sbjct 113987 GTATGTTTTCCATGGCAATTTGGAAGCCATAGAAACAGC-AGCCTTCTGTAATCTGAAGT 114045
Query 24498 TCTATACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAAC 24557
||| | |||||| || | || |||||||| ||||| || ||||| ||||||| ||
Sbjct 114046 TCTTGGCTAAATCGCTCCACCAAGTTTTCATTTACTATGCCATCACTTGCTGCAAGGAAA 114105
Query 24558 GCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTG--- 24614
|||| || || |||||| ||| | || || || | || ||||| || ||
Sbjct 114106 GCCAGAACGTGAGATATAAAGTATCTCTCCTCAGGCTTCAG-GGATTCC---CAGTGCCG 114161
Query 24615 -ATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATA 24673
|| || || || | || || || || | |||| || || || || ||||| ||||
Sbjct 114162 TATGTCCTTGGACAGGTCTACCTCCTCAGCGCTCCAGAAGGAGGCGTCCGCCTTCTTATG 114221
Query 24674 CATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAA 24715
||| | |||||||| || || | || || ||||| |||||
Sbjct 114222 CATCTGCCAGATGTTGTGGTACTCGATGGGGAAAATGACAAA 114263
>seq630
Length=879232
Score = 307 bits (340), Expect = 1e-78
Identities = 614/900 (68%), Gaps = 35/900 (4%)
Strand=Plus/Plus
Query 23788 TTTAAAAGTCAACATCTAAAGAAAAATGATTGTCTTCTTGA---GACATAACTCCCATTT 23844
|||| |||||| |||| || |||| ||| ||| || |||| ||||||||
Sbjct 417478 TTTAGAAGTCAGCATCCAAGATAAAAGAATTCTCTGTGGGACTTGACACCACTCCCATCC 417537
Query 23845 TTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTTT 23904
| | | ||||| || | || || || || ||| | || ||||| | || ||||| |
Sbjct 417538 TCTAATGCTCACCTACTCTCTTCTCAAAGAAGTTAATCTTTCCTTCCAGTGGAATATTCT 417597
Query 23905 CCATGAAATCGGATGGATTGGTAACATTATAGATTCTTTTAAATCCCAATTCAGAAATCA 23964
|||| || || ||||||| || | | | | |||| |||| ||| || |
Sbjct 417598 CCATAAAGTCAAATGGATTCTCTACTCTGAAAACCTTGCTAAAACCCAGTTCCAGCATAA 417657
Query 23965 ATCTATCTGCGACAAACTCCATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTT 24024
||| ||||| |||||||| || ||| ||||| | |||||||| || || || |
Sbjct 417658 GTCTGTCTGCCACAAACTCAATGTATTGCTTCATTAGAGTGCAATTCATCCCAATGAGCT 417717
Query 24025 TAACTGG-AAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAATA 24083
| || || |||| | |||| || || || ||||| || || || | | |||||
Sbjct 417718 TCACAGGCAAGATCT-CAGTGAGGAACTCCTGTTCTATCCGAACAGCAT---TGATAAT- 417772
Query 24084 GATCTTACTGTTTCTTCA--CTCGG-TGGATAC---AATAAATGTTTAAACATCAAACAT 24137
| || || ||||| | ||| | ||| | | || |||| ||||||| ||
Sbjct 417773 --TATTTCTCTTTCTCCCGGCTCTGATGGTTTGTGTACTAGGTGTTGGAACATCAGGCAA 417830
Query 24138 GCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCG 24197
|| ||||| ||||||| |||||| ||||| |||| | ||| || ||||| ||||| ||
Sbjct 417831 GCAAAATCACAGTGTAAACCCTCATCTCTGCTAAAAAGTTCATTAGAAAATGTGAGGCCA 417890
Query 24198 GGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATT 24257
||||| || || || || |||||||| |||||||| || || || ||||||||||| |
Sbjct 417891 GGCATCAGTCCTCGTTTCTTAAGCCAGAATATGGAAGCTAAAGAACCAGAAAAGAAGACG 417950
Query 24258 CCTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATA---ACCGGCGCTGTCATGTATC 24314
||||| ||||| ||||||||| | || ||||| | | | |||| |||
Sbjct 417951 CCTTCCACTGCAGCAAAGGCAGT-------TCACCATAGGTAGCCTCTTTGTCCCCAATC 418003
Query 24315 CACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAG 24374
|| |||| || |||||||| || ||||||||||| || || || ||||| |||
Sbjct 418004 CAGCGCAAGGCCCGGTCTGCCTTCTTCTTGACACAAGGCATCGTTTCAATGGCATTGAAG 418063
Query 24375 AGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCC 24434
||| | | |||| | |||||| | ||| || ||| | | ||||||||||||||
Sbjct 418064 AGAAATTCCCTTTCGCTGGGATCTTTTATATACGTGTCAGTAAGGAGACTATACATTTCA 418123
Query 24435 GAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGT 24494
||||| ||||| || ||| | ||||| ||||| |||||||| | ||||| ||||||||
Sbjct 418124 GAATGTATGTTGTCCATGCCAATTTGGAATCCATAGAAACAGCGGGCCTCTGTAATCTGA 418183
Query 24495 ACTTCTATACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAA 24554
|||||| | |||||| || | || |||||||| ||||| |||||||| ||||||||
Sbjct 418184 ACTTCTTGGCTAAATCGCTCCACCAAGTTTTCATTTACTATGCCGTCACTTGCTGCAAAG 418243
Query 24555 AACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTG 24614
|| || || || |||||| | | | || || || | || ||||| || ||
Sbjct 418244 AAACTCAGAACGTGGGATATAAAGTGTCTCTCCTCGGGCTTCAG-GGATTCC---CAGTG 418299
Query 24615 ----ATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTT 24670
|| || || || ||||| ||||| | |||||||| || ||||| | ||| ||
Sbjct 418300 CCGAATGTCCTTGGACGGGTCCACCTCTTCGGCGGTCCAAAAGGAGGCCTCCGTCTTGTT 418359
>seq28
Length=17023488
Score = 232 bits (256), Expect = 8e-56
Identities = 542/810 (67%), Gaps = 12/810 (1%)
Strand=Plus/Minus
Query 54031 TCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTC 54090
|| |||||| |||||| | | |||||||||||| ||| |||||||||| | |||||
Sbjct 16623679 TCATTTCATGAAGAGAGCTGCAATCCAAAGAGC---AAAAAGATCTCTGGCACGCTGTTC 16623623
Query 54091 CTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTC 54150
|| ||| || ||||||| || | ||| | ||| | | || || ||||||| || ||
Sbjct 16623622 TTCCTTTTCTATATTCTTCTTTAAATCAAAGAATTCAAAGATGTCTAAATGCCAAGGCTC 16623563
Query 54151 CAAGTATATGGTCATAACTCCAGGCCGTTTGTTTCCTCCCT-GATCTATGTATCTAGCGG 54209
|| ||| || | | ||||||| | ||||| ||| ||| |||| | |||| ||| |
Sbjct 16623562 CAGGTAAATAGCAAATGCTCCAGGACACTTGTT-CCTACCTCGATCCAGATATCAAGCTG 16623504
Query 54210 TGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGA 54269
|||| ||||| ||||||| ||| | | || |||||||| ||||| ||| | | |
Sbjct 16623503 TGTTGTTATATACTCTCAGCATCAGTACAAGGCCATTGGAATTGCCATTCGTCTCAGCAA 16623444
Query 54270 TATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATCCCCCCTGCCATTTTAG 54329
| ||||| ||| | || | |||| ||| | | | ||| || || || | |||||
Sbjct 16623443 TGTAGCTGCCAGTAGCCCAAATACAACTCACAGCAACACCAATTCCTCCACCAGATTTAG 16623384
Query 54330 AGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGT 54389
| || ||||| || | |||| || ||||| ||||| || || || |||| ||||
Sbjct 16623383 AAATCAATGCATATTGCTTTAGAGTGTCATAAATGCCTTCAATGCTGTCATATTTCATAC 16623324
Query 54390 TAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAG 54449
| || |||||||||||||| | ||| | | | || || || | || | || || |
Sbjct 16623323 TCAGAAGAAAACAGCTAGAAAGTTGTGGGCAGTTGGTACCAACACTGAAGAGAGTTGGTG 16623264
Query 54450 AAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGT---ACGTCTCGATAGCTGAGTCTA 54506
|||| || |||||| | | |||| ||| ||||||| || || || ||| || |
Sbjct 16623263 AAGCATGAGTAAACTACCTCTCAGGAAGAAGATTGTCTGCTGTTTCAATTGCTACATCAA 16623204
Query 54507 TATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGA 54566
| || || || ||||| || | | | ||| ||||| ||| | ||| ||||| | |
Sbjct 16623203 TGTCTTCTTTGTGGATTCCAACAGATGCTCTCATCAACATATGCCGTGGTATTTCAGCCA 16623144
Query 54567 TCTTGTTGTTTATTTTCAGCAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGT 54626
|| || ||||||| ||| || || || | ||||||||||| || ||||
Sbjct 16623143 CTTTTCCATTGATTTTCAACAAATAAGACCACTCTAGCAACTTAAAACCAAAGTAATTGT 16623084
Query 54627 ATGAAAAGTCTCGTTCGTAAATAATAACTGAGTTGAGTTTATCCTTATATTTGTTAACTA 54686
| || || ||| | || | |||| | | || || | | ||| |||| ||| |
Sbjct 16623083 AAGAGAAATCTTGGTCACAGATAACAGCAGAATTCAAGTGATCTTTATTGGCCAAAACAA 16623024
Query 54687 CATCCA-TGGTAATACTT-GAAATAATCGGAGAATGTTTCCCATTTTTAGGATTGACATA 54744
||||| || | |||| | | || ||||| | ||| |||| | ||| | | |
Sbjct 16623023 TATCCAGTGCT--GACTTGGCCACCATGGGAGAGTATTTGTCATTATGTGGACTTATGCA 16622966
Query 54745 GTTAAATAAATCCTTCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGA 54804
|||| | | || | |||||| ||||| || | || |||||||||||||| | || ||
Sbjct 16622965 GTTATACAGGTCTTCCATCACATCACTGAACACTTCATTTGTTTCTTTGTGCAAGTTAGA 16622906
Query 54805 TACGGCTATTCTAGCGGCTAGAATGGCATA 54834
|| || | ||||| || || || |||||
Sbjct 16622905 GACAGCAGTCCTAGCTGCCAGGATAGCATA 16622876
>seq867
Length=266704
Score = 123 bits (136), Expect = 3e-23
Identities = 257/382 (67%), Gaps = 3/382 (1%)
Strand=Plus/Minus
Query 23788 TTTAAAAGTCAACATCTAAAGAAAAATGATTGTCTTCTTGA---GACATAACTCCCATTT 23844
|||| |||||| |||| || | ||||| ||| ||| | || ||||| ||||||||
Sbjct 180931 TTTAGAAGTCAGCATCCAAGGTAAAATAATTCTCTGTTGGACTTGACATCACTCCCATCC 180872
Query 23845 TTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTTT 23904
| || || ||||| || | ||||| || || ||||| || ||||| | ||| ||||| |
Sbjct 180871 TCTGATACTCACCTACTCTCTTTTCAAAGAAGTTAGTCTTTCCTTCCAGTGAAATATTCT 180812
Query 23905 CCATGAAATCGGATGGATTGGTAACATTATAGATTCTTTTAAATCCCAATTCAGAAATCA 23964
|||| || || ||||||| || | | | | |||| ||| |||| || |
Sbjct 180811 CCATAAAGTCAAATGGATTCTCTACTCTGAAAACCTTGCTAAAACCCGATTCCAGCATAA 180752
Query 23965 ATCTATCTGCGACAAACTCCATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTT 24024
||||||||| |||||||| || ||| ||||| | ||||||||||| || || |
Sbjct 180751 GTCTATCTGCCACAAACTCAATGTATTGCTTCATTAGAGTGCAATTCATTCCGATGAGCT 180692
Query 24025 TAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAATAG 24084
| || || ||| |||| || || || ||||| || || || | | || ||
Sbjct 180691 TCACAGGCGAGGCCTCAGTGAGGAACTCCTGTTCTATCCGAACAGCATTGATAATTATTT 180632
Query 24085 ATCTTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACATGCGAAAT 24144
||||||| | || || ||| | | || |||||| |||| || || | ||||
Sbjct 180631 CTCTTACTCTCTCCTCTGATGGTTTGTGTACTAGATGTTTGAACAACAGGCAAACAAAAT 180572
Query 24145 CGCAGTGTAGACCCTCGTCTCT 24166
| ||||||| |||| |||||
Sbjct 180571 CACAGTGTAAACCCGATTCTCT 180550
>seq2
Length=18007423
Score = 120 bits (132), Expect = 4e-22
Identities = 99/121 (82%), Gaps = 0/121 (0%)
Strand=Plus/Minus
Query 24157 CCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 24216
|||| ||||| ||||| | ||| || ||||| ||||| || ||||| || || || || |
Sbjct 1941489 CCTCATCTCTGCTAATAAGTTCATTAGAAAATGTGAGGCCAGGCATCAGTCCTCGTTTCT 1941430
Query 24217 TAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGG 24276
| ||||| |||||||| ||||| || ||||||||||| || ||||||||||| |||||||
Sbjct 1941429 TGAGCCAGAATATGGATGCAAAAGAACCAGAAAAGAAGATGCCTTCTACTGCAGCAAAGG 1941370
Query 24277 C 24277
|
Sbjct 1941369 C 1941369
Score = 100 bits (110), Expect = 3e-16
Identities = 94/120 (78%), Gaps = 0/120 (0%)
Strand=Plus/Minus
Query 24395 ATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGC 24454
|||||| | || || ||||| | |||||||||||||| ||||| |||||||| |||||
Sbjct 1939021 ATCTTTTATGTAAGTGTCAATAAGGAGACTATACATTTCAGAATGTATGTTTTCCATGGC 1938962
Query 24455 CATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTATACAAAATCGTTC 24514
||||| || || |||||||| | || || |||||||| |||||| | |||||| ||
Sbjct 1938961 AATTTGGAAACCATAGAAACAGCGGGCTTCTGTAATCTGAACTTCTTGGCTAAATCGCTC 1938902
>seq80
Length=8459403
Score = 113 bits (124), Expect = 5e-20
Identities = 107/137 (78%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 53150 ACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACA 53209
|| ||||||||||| ||||| ||||| ||||| || || || ||||| || ||||| | |
Sbjct 1278101 ACCTGAAATTCTCCTGACAAGACTCTGCGAGTATAGATGTTGCTGGTGTAAGGTTCAATA 1278160
Query 53210 GACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAA 53269
||||||||||| |||| || |||||||| || || || ||||| || || | | ||||
Sbjct 1278161 GACTCATTATTCCCCAGGATCTGAGCAGTGGAAGCTGTAGGCATCGGGGCAATAAGTAAA 1278220
Query 53270 CTATTTCTAAGACCGTA 53286
|| ||||| | ||| ||
Sbjct 1278221 CTGTTTCTTATACCATA 1278237
Score = 113 bits (124), Expect = 5e-20
Identities = 106/135 (79%), Gaps = 0/135 (0%)
Strand=Plus/Plus
Query 54025 CTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCT 54084
|| |||||||||||| |||||||| |||||||||||||| | ||| |||||||||| |
Sbjct 1289062 CTCCACTCGTTTCATGAAGAGATCCGGAATCCAAAGAGCAAAAAAAAGATCTCTGGCACG 1289121
Query 54085 ATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCA 54144
||||| || |||||||| ||||| || | ||| ||||| | | || || |||||||
Sbjct 1289122 CTGTTCTTCCTTTCCTGTGTTCTTCTTTAAATCCAGGAATTCAAAGATGTCTAAATGCCA 1289181
Query 54145 CGGTTCCAAGTATAT 54159
|| |||| ||| ||
Sbjct 1289182 AGGCTCCAGGTAAAT 1289196
Score = 111 bits (122), Expect = 2e-19
Identities = 127/171 (74%), Gaps = 0/171 (0%)
Strand=Plus/Plus
Query 52875 TCCATCCGTAAAAATGCATACTTGTTAGTTTGGAATAACTCGGATCTGCTATATGGATAT 52934
|||| ||||| || |||||||| || |||||| ||| | || || || || ||||| |
Sbjct 1275313 TCCAGCCGTAGAAGTGCATACTAGTGAGTTTGCCATAGTTAGGCTCAGCAATGTGGATGT 1275372
Query 52935 TCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCT 52994
||| ||| || |||||||| ||||| || || || || |||||||| || | | || |
Sbjct 1275373 TCAAAGACTGGCTTTGATCAATGAAAGCACCTCTCTCAGCAGCCATCTTGAGAACAGTTT 1275432
Query 52995 TTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAA 53045
| || | |||||||| | ||||||||||| | |||| | || || ||||
Sbjct 1275433 TCTGAGAGATTTCCCACACAGTTTTATAAAGTTGCTTCAGGTCATCAGGAA 1275483
Score = 102 bits (112), Expect = 1e-16
Identities = 122/166 (73%), Gaps = 0/166 (0%)
Strand=Plus/Plus
Query 54768 CACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAA 54827
|||| || | ||| |||||||||||||| | || || ||||| || || || || || |
Sbjct 1304487 CACTGAACACTTTCTTTGTTTCTTTGTGCAAGTTAGAGACGGCAATCCTGGCTGCCAGGA 1304546
Query 54828 TGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGTCAGAGTGTCCA 54887
| ||||| || ||||| | ||||| | || || ||| |||| || | || ||| || |
Sbjct 1304547 TAGCATAGTCAGGATGCTTAGTAGTCAAGGTTGCAGCTGTTTCAGCAGCCAAAGTATCTA 1304606
Query 54888 ATTCTACCGTTGTTACTCCATTATATATTCCTTGGATAACCTTCAT 54933
||| ||||| || || ||| | || | |||||||| ||||||||
Sbjct 1304607 GTTCCACCGTGGTGACCCCACTGTACAAGCCTTGGATTACCTTCAT 1304652
Score = 100 bits (110), Expect = 3e-16
Identities = 136/190 (72%), Gaps = 0/190 (0%)
Strand=Plus/Plus
Query 53388 CATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGT 53447
|||| || || |||||||| | || || ||| || ||||| || || || || || ||||
Sbjct 1283222 CATAGGTTTCATATGGTCCATGCTCCTTAGCAAGGTCACAGCTGGCTTCCAAGGCTCCGT 1283281
Query 53448 AATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGAT 53507
||||||| ||||| ||||||| |||||| | || ||||| || ||||| || |
Sbjct 1283282 AATAAATAGTTTCAAAGATCTGCTTATTCAATAGCTGGGCTTCTGCACTCTCAAAAGGGT 1283341
Query 53508 AATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTC 53567
| | | || ||||| || ||||| | ||||| || ||||| || || || | ||| |
Sbjct 1283342 ATCTCATCAGGATAAAAGCATCTGCCAGACCTTGTACCCCAATTCCAATGGGGCGATGAC 1283401
Query 53568 TCTTATTAGA 53577
||||| ||
Sbjct 1283402 GTTTATTTGA 1283411
>seq57
Length=8566406
Score = 111 bits (122), Expect = 2e-19
Identities = 105/134 (78%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 24159 TCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTA 24218
|| ||||| || || | ||| ||||||||||||||||| ||||| || || | ||| ||
Sbjct 1418657 TCATCTCTGCTGATGAGTTCATTGGAAAACGTGAGTCCTGGCATAAGACCTCTCTTCTTT 1418716
Query 24219 AGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCA 24278
||||| ||||| | ||||| ||||| || ||||||| ||||||||| || || |||||
Sbjct 1418717 AGCCAGAATATAGCAGCAAAAGATCCTGAGAAGAAAACTCCTTCTACAGCAGCGAAGGCC 1418776
Query 24279 ATAAGTCTTTCTCC 24292
| | |||||| ||
Sbjct 1418777 ACCACTCTTTCCCC 1418790
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 593668491602880
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