Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cebus_20capucinus_20imitator_20[refseq_20GCF_5F001604975.1_202016-
04-04] 7,156 sequences; 2,717,703,182 total letters
Query= NC_001987.1
Length=108409
Score E
Sequences producing significant alignments: (Bits) Value
seq599 244 7e-60
seq13 95.1 8e-15
>seq599
Length=1005688
Score = 244 bits (270), Expect = 7e-60
Identities = 526/775 (68%), Gaps = 10/775 (1%)
Strand=Plus/Minus
Query 96898 TAAACAGCCATGGGCATTTTTATGCTAGGGTAAGGGTTATAGTTTTCCAGAATAATGTCA 96957
||||||||||| |||||| || | || | || || | ||| | ||| |||
Sbjct 754688 TAAACAGCCATTTCCATTTTAATAGTTGGATGCGGATTGCACCCTTCAACCTTAAAGTCT 754629
Query 96958 TTTGCTTTAAAATCATCAATAGATGCAATCTTTCTGGCAAACTTTAGTGTTGGGAAAGGC 97017
| ||||| || |||||||| ||| | || || ||| || ||||||||||
Sbjct 754628 TCAGCTTTGAAGTCATCAATTTTCTCAACTTGTCGAAGAATCTTGAGCTTTGGGAAAGGT 754569
Query 97018 CTGGGAGTTCGCGTAAGCTGCTCTGTGAGAGCATCAATGTGATTCACATAAATGTGAGCA 97077
||||| |||| |||||| | | || | | |||||||||| ||||| || |||
Sbjct 754568 CTGGGTTCTCGCTGAAGCTGAATTTTCAGTGGCTTGATGTGATTCAGGTAAATATGGGCA 754509
Query 97078 TCTCCTAAAGTGTGAATAAATTCTCCAGGAACTAAATCAGTGACATGGGCGATCATACAA 97137
||||| ||||| || | ||| || || || | | |||| || ||||||| |
Sbjct 754508 TCTCCCAAAGTATGTACAAAGTCACCTGGCTTCAGGCCCGTGATGTGCGCGATCACGTAC 754449
Query 97138 GTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCCTAGTCCCATATCAGCTGATCTT 97197
|| | | | ||||| || |||| |||||||| ||||| ||||| || |||||||
Sbjct 754448 GTGAGCAAGGTGTAGCTGGCGGTGTTGAAAGGCACACCTAGGCCCATGTCTCCTGATCTC 754389
Query 97198 TGATATAACTGACAGGAAAGCTTTCCAT-CACACACATAAAACTGACTCAATACATGACA 97256
|| | | ||| ||||| |||| |||| ||| | | || ||||| | | |||| ||
Sbjct 754388 TGGTGCAGCTGGCAGGACAGCTCACCATTCAC-CTCGTAGAACTGGCAGAGGGCATGGCA 754330
Query 97257 GGGGGGCAACGCCATTTTTGGAACATCTAAGACATTCCAAGCACACATCAACATTCTTCT 97316
|| |||| |||||| |||| |||| ||||||||| ||||| | ||||||||
Sbjct 754329 TGGAGGCAGCGCCATCAGAGGAAGATCTCTTGGATTCCAAGCGCACATGATGATTCTTCT 754270
Query 97317 ATCGGTTGGGTTTGTGTGTATGGTATTAATTATCTGCTT-TAATTGATCAACGCCTTCTC 97375
|| ||||| || | ||||| | | | | || || || ||| ||||| |||| ||
Sbjct 754269 GTCATCAGGGTTGGTTTTGATGGTGTCAGTCA-CTCTTTGTAGTTGGTCAACTCCTTGTC 754211
Query 97376 CACCATAATTGTGCTTAAGACCTTGATATTCTGCTCCAAAATGCCTCCATTGGAATCCAT 97435
| ||||| | | | || |||||||| |||||||||||||| ||||| ||||
Sbjct 754210 CTGAATAATCTGAATCCATATCTCTGTATTCTGCCCCAAAATGCCTCCACTGGAAGCCAT 754151
Query 97436 AAACAGGTCCAAGGTCTCCTTCTTCTCTATCACAGAA-ACCAAGCTTATCTAAATAGGAC 97494
|||| || || | ||| ||||||||||| | |||| |||||| |||| | | ||
Sbjct 754150 AAACTGGGCCCAAGTCCCCTTCTTCTCTGGCGGAGAATCCCAAGC-TATCCAGAAAGTCT 754092
Query 97495 CTAGATCCATTTGCATCCCAAATGTGCACACCAGATGCTGCAAGCTCTTT-GCTGTCAGT 97553
| |||||||| |||||||| || | ||| || | | |||||||| ||| || |
Sbjct 754091 CGGGATCCATTGGCATCCCAGATTTTCACTCCCTTGGAAGACAGCTCTTTAGCTTTC--T 754034
Query 97554 AGATCCTCTGATAAACCACAACAATTCTTCCACAACACCTCTCCAAAATAC-TCTCTTAG 97612
| ||| ||||||| |||| ||| || |||| |||||| |||| || || | || |
Sbjct 754033 GGGTCCCTTGATAAAGCACAGCAACTCCTCCAAAACACCCTTCCAGAACACAACGTTTGG 753974
Query 97613 TTGTTAAGAGAGGAAAATCCTTTTCTAAGCTGTATCTAGACTGCATTCCAAAAAC 97667
|||| | |||||||| || | | | |||||| | | |||||| || || ||
Sbjct 753973 TTGTCAGCAGAGGAAATTCATCTCTCAGGCTGTAGCGCGCCTGCATGCCGAACAC 753919
>seq13
Length=13416947
Score = 95.1 bits (104), Expect = 8e-15
Identities = 98/126 (78%), Gaps = 2/126 (2%)
Strand=Plus/Minus
Query 97402 TATTCTGCTCCAAAATGCCTCCATTGGAATCCATAAACAGGTCCAAGGTCTCCTTCTTCT 97461
|||||||| |||||||||||||| ||||| |||||||| || || | ||| |||||||||
Sbjct 11478297 TATTCTGCCCCAAAATGCCTCCACTGGAAGCCATAAACTGGGCCCAAGTCCCCTTCTTCT 11478238
Query 97462 CTATCACAGAA-ACCAAGCTTATCTAAATAGGACCTAGATCCATTTGCATCCCAAATGTG 97520
|| | |||| |||||| |||| | | || | |||||||| |||||||| || |
Sbjct 11478237 CTGGCGGAGAATCCCAAGC-TATCCAGAAAGTCTCGGGATCCATTGGCATCCCAGATTTT 11478179
Query 97521 CACACC 97526
||| ||
Sbjct 11478178 CACTCC 11478173
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 346753755666920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |