Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cebus_20capucinus_20imitator_20[refseq_20GCF_5F001604975.1_202016-
04-04] 7,156 sequences; 2,717,703,182 total letters
Query= NC_001993.1
Length=236120
Score E
Sequences producing significant alignments: (Bits) Value
seq683 95.1 2e-14
seq407 91.5 2e-13
seq38 91.5 2e-13
>seq683
Length=714717
Score = 95.1 bits (104), Expect = 2e-14
Identities = 160/232 (69%), Gaps = 0/232 (0%)
Strand=Plus/Minus
Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598
||||| || ||| | ||||| || | ||||| || || || | ||| | || | | |
Sbjct 111602 ATGCAGATCTTTGTGAAGACCCTCATGGGCAAGACCATCACCCTTGAGGTCGAGCCCAGT 111543
Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658
|| || ||| ||| | ||| ||||||||||| || || ||||| |||||||||||
Sbjct 111542 GACACCATTGAGAATGTTAAAGCCAAAATTCAAGACAAGGAGGGTATCCCACCTGATCAG 111483
Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718
|| | || || ||||| || ||| | | |||||| | || || | ||| || ||
Sbjct 111482 CAGCGTCTGATATTTGCCGGTAAATAGCTGGAGGATGGCCGCACGCTCTCAGACTACAAC 111423
Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTA 124770
|| || ||||| || || |||| |||| | || | |||||||| ||||
Sbjct 111422 ATCCAGAAAGAGTCCACCCTGCACCTGGTGCTGCGCCTGCGAGGTGGCATTA 111371
>seq407
Length=3256691
Score = 91.5 bits (100), Expect = 2e-13
Identities = 160/233 (69%), Gaps = 0/233 (0%)
Strand=Plus/Minus
Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597
|||||| || ||| | ||||| || || ||||| || || || | ||| | || | ||
Sbjct 904446 AATGCAGATCTTTGTGAAGACCCTCACGGGCAAGACCATCACCCTTGAGGTCGAGCCCAA 904387
Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657
||| || ||| ||| | ||| ||||||||||| || || ||||| |||||||| ||
Sbjct 904386 TGACACCATTGAGAATGTCAAAGCCAAAATTCAAGACAAGGAGGGTATCCCACCTGACCA 904327
Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717
|| | || || ||||| | | || | |||||| | || || | ||| || ||
Sbjct 904326 GCAGCGTCTGATATTTGCCAGCCAGCAGCTGGAGGATGGCCGCACGCTCTCAGACTACAA 904267
Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTA 124770
|| || ||||| || || |||| |||| | || | |||||||| ||||
Sbjct 904266 CATCCAGAAAGAGTCCACCCTGCACCTGGTGCTGCGCCTGCGAGGTGGCATTA 904214
>seq38
Length=10264441
Score = 91.5 bits (100), Expect = 2e-13
Identities = 160/232 (69%), Gaps = 1/232 (0%)
Strand=Plus/Plus
Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598
||||| || ||| | ||||| || | ||||| || || || | ||| | || || |
Sbjct 9540647 ATGCAGATCTTTGTGAAGACCCTCATGGGCAAGACCATCACCCTTGAGGTCGA-GCCCGT 9540705
Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658
|| || ||| ||| | ||| ||||||||||| || || ||||| |||||||| ||
Sbjct 9540706 GACACCATTGAGAATGTCAAAGCCAAAATTCAAGACAAGGAGGGTATCCCACCTGACCAG 9540765
Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718
|| | || || ||||| || ||||| | |||||| | | ||| | ||| || ||
Sbjct 9540766 CAGCGTCTGATATTTGCCGGCAAACAGCTGGAGGATGGCCACACACTCTCAGACTACAAC 9540825
Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTA 124770
|| || ||||| || || |||| |||| | || | |||||||| ||||
Sbjct 9540826 ATCCAGAAAGAGTCCACCCTGCACCTGGTGCTGCGCCTGCGAGGTGGCATTA 9540877
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 755388424460800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |