Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cebus_20capucinus_20imitator_20[refseq_20GCF_5F001604975.1_202016- 04-04] 7,156 sequences; 2,717,703,182 total letters Query= NC_002188.1 Length=288539 Score E Sequences producing significant alignments: (Bits) Value seq99 109 1e-18 >seq99 Length=6617370 Score = 109 bits (120), Expect = 1e-18 Identities = 106/133 (80%), Gaps = 4/133 (3%) Strand=Plus/Minus Query 52057 GCATTTTTTGGAGCTCAGCTAAATTCTTTTATCCATGTTATTATGTACACTTATTATGGT 52116 |||||||||||||| ||| | ||||| ||||||||||| ||||||||| | || |||||| Sbjct 1007974 GCATTTTTTGGAGCACAGATGAATTCCTTTATCCATGTGATTATGTACTCATACTATGGT 1007915 Query 52117 ATGGCCGCTTGTGGTCCTATG--TTCAGAAAGTATCTATGGTGGAAACGTTATCTTACTA 52174 | | || | ||| || ||| |||||||| ||||| ||||||||||| || || || | Sbjct 1007914 TTAACTGCATTTGGCCC-ATGGATTCAGAAA-TATCTTTGGTGGAAACGATACCTGACCA 1007857 Query 52175 TAATGCAGTTGGT 52187 | ||||| |||| Sbjct 1007856 TGTTGCAGCTGGT 1007844 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 923114220046240