Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cebus_20capucinus_20imitator_20[refseq_20GCF_5F001604975.1_202016-
04-04] 7,156 sequences; 2,717,703,182 total letters
Query= NC_002520.1
Length=232392
Score E
Sequences producing significant alignments: (Bits) Value
seq25 102 1e-16
seq434 98.7 1e-15
seq573 95.1 2e-14
seq69 95.1 2e-14
seq19 95.1 2e-14
seq181 89.7 8e-13
seq118 89.7 8e-13
seq4 89.7 8e-13
seq3 89.7 8e-13
seq93 87.8 3e-12
seq64 87.8 3e-12
seq292 86.0 9e-12
seq63 86.0 9e-12
seq290 84.2 3e-11
>seq25
Length=15232693
Score = 102 bits (112), Expect = 1e-16
Identities = 107/138 (78%), Gaps = 2/138 (1%)
Strand=Plus/Plus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTC-TTTAGATATATTATAATCTGA 146109
||||| | |||||| | |||| ||| | |||||| || ||| || || || || || ||
Sbjct 12145241 CCACCACGAAGTCTCAGCACCAGATGAAGAGTAGACTCCTTTTGA-ATGTTGTAGTCAGA 12145299
Query 146110 AAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGG 146169
||||| | | ||| |||| ||| || |||||| | |||| |||||||||||| |||||
Sbjct 12145300 CAGAGTACATCCATCTTCTAGTTGCTTGCCAGCATAGATCAGTCTTTGCTGATCAGGAGG 12145359
Query 146170 AATTCCTTCTTTATCTTG 146187
||||||||| ||||| ||
Sbjct 12145360 AATTCCTTCCTTATCCTG 12145377
>seq434
Length=1819716
Score = 98.7 bits (108), Expect = 1e-15
Identities = 104/137 (76%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
||||| | |||||| || || | ||| | |||||| || || || ||||| || ||
Sbjct 1331282 CCACCACGAAGTCTCAACACAAGATGAAGAGTAGACTCCTTCTGAATGTTATAGTCAGAC 1331341
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170
| ||| | | ||| || | ||| || |||||||| |||| |||||||||||| ||||||
Sbjct 1331342 AAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGA 1331401
Query 146171 ATTCCTTCTTTATCTTG 146187
|||||||| ||||| ||
Sbjct 1331402 ATTCCTTCCTTATCCTG 1331418
>seq573
Length=1150292
Score = 95.1 bits (104), Expect = 2e-14
Identities = 103/137 (75%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
||||| | |||||| || || | ||| | |||||| || || || || || || ||
Sbjct 200470 CCACCACGAAGTCTCAACACAAGATGAAGAGTAGACTCCTTCTGAATGTTGTAGTCAGAC 200529
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170
| ||| | | ||| || | ||| || |||||||| |||| |||||||||||| ||||||
Sbjct 200530 AAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGA 200589
Query 146171 ATTCCTTCTTTATCTTG 146187
|||||||| ||||| ||
Sbjct 200590 ATTCCTTCCTTATCCTG 200606
>seq69
Length=11786368
Score = 95.1 bits (104), Expect = 2e-14
Identities = 103/137 (75%), Gaps = 0/137 (0%)
Strand=Plus/Minus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
||||| | |||||| || || | ||| | |||||| || || || || || || ||
Sbjct 9297237 CCACCACGAAGTCTCAACACAAGATGAAGAGTAGACTCCTTCTGAATGTTGTAGTCAGAC 9297178
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170
| ||| | | ||| || | ||| || |||||||| |||| |||||||||||| ||||||
Sbjct 9297177 AAAGTACCTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGA 9297118
Query 146171 ATTCCTTCTTTATCTTG 146187
|| ||||| ||||||||
Sbjct 9297117 ATGCCTTCCTTATCTTG 9297101
>seq19
Length=20362211
Score = 95.1 bits (104), Expect = 2e-14
Identities = 106/139 (76%), Gaps = 2/139 (1%)
Strand=Plus/Minus
Query 146050 TCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTC-TTTAGATATATTATAATCTG 146108
|||||| | |||||| || || | ||| | |||| | || ||| || || || || || |
Sbjct 6160572 TCCACCACAAAGTCTCAACACAAGATGAAGAGTAAACTCCTTTTGA-ATGTTGTAGTCAG 6160514
Query 146109 AAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAG 146168
| | ||| | | || || | ||| || |||||||| |||| |||||||||||| ||||
Sbjct 6160513 ACAAAGTACGTCCGTCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAG 6160454
Query 146169 GAATTCCTTCTTTATCTTG 146187
|||||||||||||||| ||
Sbjct 6160453 GAATTCCTTCTTTATCCTG 6160435
>seq181
Length=4179193
Score = 89.7 bits (98), Expect = 8e-13
Identities = 102/137 (74%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
||||| | |||||| || || | ||| | |||||| || || || || || || ||
Sbjct 2580467 CCACCACGAAGTCTCAACACAAGATGAAGAGTAGACTCCTTCTGAATGTTGTAGTCAGAC 2580526
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170
| ||| | | ||| || | ||| || |||||||| |||| |||||||||||| ||| ||
Sbjct 2580527 AAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGACGA 2580586
Query 146171 ATTCCTTCTTTATCTTG 146187
|||||||| ||||| ||
Sbjct 2580587 ATTCCTTCCTTATCCTG 2580603
>seq118
Length=10303814
Score = 89.7 bits (98), Expect = 8e-13
Identities = 104/138 (75%), Gaps = 2/138 (1%)
Strand=Plus/Plus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
||||| | |||||| || || | ||| | |||||| || || || || | || |
Sbjct 8799287 CCACCACAAAGTCTCAACACAAGATGAAGAGTAGACTCCTTCTGAATGTTGCAGTCAGGC 8799346
Query 146111 AGAGTTCTGC-TATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGG 146169
||||| ||| |||| || | ||| || ||||||||||||| ||||| |||||| |||||
Sbjct 8799347 AGAGTA-TGCATATCTTCCAGTTGCTTGCCAGCAAAAATCAGTCTTTACTGATCAGGAGG 8799405
Query 146170 AATTCCTTCTTTATCTTG 146187
|| |||||||||||| ||
Sbjct 8799406 AACTCCTTCTTTATCCTG 8799423
>seq4
Length=15321207
Score = 89.7 bits (98), Expect = 8e-13
Identities = 102/137 (74%), Gaps = 0/137 (0%)
Strand=Plus/Minus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
||||| | || ||| || || | ||| | |||||| || || || || || || ||
Sbjct 5243222 CCACCACGAAATCTCAACACAAGATGAAGAGTAGACTCCTTCTGAATGTTGTAGTCAGAC 5243163
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170
| ||| | | ||| || | ||| || |||||||| |||| |||||||||||| ||||||
Sbjct 5243162 AAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGA 5243103
Query 146171 ATTCCTTCTTTATCTTG 146187
|||||||| ||||| ||
Sbjct 5243102 ATTCCTTCCTTATCCTG 5243086
>seq3
Length=16812482
Score = 89.7 bits (98), Expect = 8e-13
Identities = 102/137 (74%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
||||| | |||||| | || | ||| | |||||| || || || || || || ||
Sbjct 14706844 CCACCACGAAGTCTCAGCACAAGATGAAGAGTAGACTCCTTCTGAATGTTGTAGTCAGAC 14706903
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170
| ||| | | ||| || | ||| || |||||||| |||| |||||||||||| ||||||
Sbjct 14706904 AAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGA 14706963
Query 146171 ATTCCTTCTTTATCTTG 146187
|||||||| ||||| ||
Sbjct 14706964 ATTCCTTCCTTATCCTG 14706980
>seq93
Length=13160294
Score = 87.8 bits (96), Expect = 3e-12
Identities = 99/130 (76%), Gaps = 2/130 (2%)
Strand=Plus/Plus
Query 146059 AAGTCTTAATACCAAATGTAAAGTAGATTC-TTTAGATATATTATAATCTGAAAGAGTTC 146117
|||||| || || | ||| | |||||| || ||| || || || || || | | ||| |
Sbjct 4738352 AAGTCTCAACACAAGATGAAGAGTAGACTCCTTTTGA-ATGTTGTAGTCAGGCAAAGTAC 4738410
Query 146118 TGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGAATTCCTT 146177
| ||| || | ||| || |||||||| |||| |||||||||||| |||||||||||||
Sbjct 4738411 AACCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTT 4738470
Query 146178 CTTTATCTTG 146187
| ||||| ||
Sbjct 4738471 CCTTATCCTG 4738480
>seq64
Length=8039362
Score = 87.8 bits (96), Expect = 3e-12
Identities = 101/136 (74%), Gaps = 0/136 (0%)
Strand=Plus/Minus
Query 146052 CACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAAA 146111
|||| | |||||| || || | ||| | |||||| || || || || || || || |
Sbjct 5682516 CACCACGAAGTCTCAACACAAGATGAAGAGTAGACTCCTTCTGAATGTTGTAGTCAGACA 5682457
Query 146112 GAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGAA 146171
||| | | ||| || | ||| || |||||| | |||| |||||||||||| |||||||
Sbjct 5682456 AAGTACGTCCATCTTCCAGTTGCTTGCCAGCAGAGATCAGTCTTTGCTGATCAGGAGGAA 5682397
Query 146172 TTCCTTCTTTATCTTG 146187
||||||| ||||| ||
Sbjct 5682396 TTCCTTCCTTATCCTG 5682381
>seq292
Length=4239571
Score = 86.0 bits (94), Expect = 9e-12
Identities = 101/137 (74%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
||||| |||||| || || | ||| | |||||| || || ||||| || || ||
Sbjct 2943961 CCACCATGAAGTCTCAACACAAGATGAAGAGTAGACTCCTTCTGAATATTGTAGTCAGAC 2944020
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170
| ||| | | || || | || || |||||||| |||| |||||||||||| ||||||
Sbjct 2944021 AAAGTGCGTCCATATTCCAGTTCCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGA 2944080
Query 146171 ATTCCTTCTTTATCTTG 146187
|||||||| ||||| ||
Sbjct 2944081 ATTCCTTCCTTATCCTG 2944097
>seq63
Length=8132274
Score = 86.0 bits (94), Expect = 9e-12
Identities = 101/137 (74%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
||||| |||||| || || | ||| | |||||| || || || || || || ||
Sbjct 6710334 CCACCAAGAAGTCTCAACACAAGATGAAGAGTAGACTCCTTCTGAATGTTGTAGTCAGAC 6710393
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170
| ||| | | | | || | ||| || |||||||| |||| |||||||||||| ||||||
Sbjct 6710394 AAAGTACGTCCACCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGA 6710453
Query 146171 ATTCCTTCTTTATCTTG 146187
|||||||| ||||| ||
Sbjct 6710454 ATTCCTTCCTTATCCTG 6710470
>seq290
Length=2922102
Score = 84.2 bits (92), Expect = 3e-11
Identities = 103/138 (75%), Gaps = 2/138 (1%)
Strand=Plus/Plus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTC-TTTAGATATATTATAATCTGA 146109
||||| | |||||| || || | ||| | | |||| || ||| || || || || || ||
Sbjct 1757541 CCACCACGAAGTCTCAACACAAGATGAAGAATAGACTCCTTTTGA-ATGTTGTAGTCAGA 1757599
Query 146110 AAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGG 146169
| ||| | | ||| || | ||| || |||||||| |||| ||||||||||| |||
Sbjct 1757600 CAAAGTACATCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGCCTTTGCTGATCACAAGG 1757659
Query 146170 AATTCCTTCTTTATCTTG 146187
||||||||||||||| ||
Sbjct 1757660 AATTCCTTCTTTATCCTG 1757677
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 743459891563520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |