Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cebus_20capucinus_20imitator_20[refseq_20GCF_5F001604975.1_202016- 04-04] 7,156 sequences; 2,717,703,182 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq599 264 9e-66 >seq599 Length=1005688 Score = 264 bits (292), Expect = 9e-66 Identities = 539/798 (68%), Gaps = 2/798 (0%) Strand=Plus/Plus Query 19978 GATCGAACCGGAACTGGAACGTTATCTGTATTTGGAATGCAATCTCGATATAACTTGAGA 20037 ||||| ||||| || || || | || || || || ||||| | || || | | ||||| Sbjct 753892 GATCGCACCGGCACCGGGACCCTGTCGGTGTTCGGCATGCAGGCGCGCTACAGCCTGAGA 753951 Query 20038 AATGAATTTCCCTTATTAACTACGAAACGG-GTATTTTGGAAAGGCGTTGTTGAAGAGTT 20096 |||||||||| | | || || ||||| || || ||||| || ||| | || ||||| Sbjct 753952 GATGAATTTCCTCTGCTGACAACCAAACGTTGTGTTCTGGAAGGGTGTTTTGGAGGAGTT 754011 Query 20097 ATTATGGTTTATTAAAGGATCAACAAATTCTACCGAGCTTGTAGAAAAAGGAGTTAAGAT 20156 | || ||||| || ||| | | ||| ||| ||||| || ||||| || || Sbjct 754012 GCTGTGCTTTATCAAGGGACCCAGAAAG-CTAAAGAGCTGTCTTCCAAGGGAGTGAAAAT 754070 Query 20157 TTGGAGCGCACATGGATCTAAGCAATTTTTACACAGCAATGGATTTGACAACCGTCAAGA 20216 ||| || ||||||| | ||| | | ||| ||||| | | | |||| Sbjct 754071 CTGGGATGCCAATGGATCCCGAGACTTTCTGGATAGCTTGGGATTCTCCGCCAGAGAAGA 754130 Query 20217 GGGGGATTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTGAATATGTTGA 20276 ||||| ||||| || || ||||| || || ||||| |||||||| || ||||| || Sbjct 754131 AGGGGACTTGGGCCCAGTTTATGGCTTCCAGTGGAGGCATTTTGGGGCAGAATACAGAGA 754190 Query 20277 CATGAACACAAATTATTTTGGACAAGGAGTAGATCAATTACAAAATGTTATTAATTTAAT 20336 ||| | || |||||| ||||||||||| || ||| |||||| || | | | || Sbjct 754191 TATGGATTCAGATTATTCAGGACAAGGAGTTGACCAACTACAAAGAGTGACTGACACCAT 754250 Query 20337 TAAAACGAACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGCTAAAGATGTGCC 20396 ||||| ||||| | ||||||||||| || | ||||| ||||| | | |||| | || Sbjct 754251 CAAAACCAACCCTGATGACAGAAGAATCATCATGTGCGCTTGGAATCCAAGAGATCTTCC 754310 Query 20397 TTTAATGGCTTTGCCTCCATGTCATATGCTATGCCAATTTTACGTTGCTAATAATGAATT 20456 | | ||||| |||||||||| ||| || ||||| || |||| | ||| ||| | Sbjct 754311 TCTGATGGCGCTGCCTCCATGCCATGCCCTCTGCCAGTTCTACGAGGTGAATGGTGAGCT 754370 Query 20457 GTCGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTTCAATATTGC 20516 ||| || || || | || |||| | || ||||| || ||||| |||||||| | || Sbjct 754371 GTCCTGCCAGCTGCACCAGAGATCAGGAGACATGGGCCTAGGTGTGCCTTTCAACACCGC 754430 Query 20517 AAGTTATGCGCTGCTTACGTATATGATTGCACATGTTACAGATTTAAAAACGGGTGACTT 20576 || || | |||| ||||| |||| || || | || | | || | |||||||| Sbjct 754431 CAGCTACACCTTGCTCACGTACGTGATCGCGCACATCACGGGCCTGAAGCCAGGTGACTT 754490 Query 20577 AGTCCACACCATAGGAGACGCGCATATTTACCTTAATCATATAGAACCTTTAAAATTACA 20636 || || || | ||||| || ||||||||||| ||||| || | || | ||| | || Sbjct 754491 TGTACATACTTTGGGAGATGCCCATATTTACCTGAATCACATCAAGCCACTGAAAATTCA 754550 Query 20637 GTTAACACGACAACCAAAACAATTCCCAACTCTTCGCATTACTCGAACTGTTAAAGATAT 20696 | | ||| |||| | || ||||||| || ||| |||| ||| | | || Sbjct 754551 GCTTCAGCGAGAACCCAGACCTTTCCCAAAGCTCAAGATTCTTCGACAAGTTGAGAAAAT 754610 Query 20697 TAACGATTTTAAAGCTGATGATTTTGTGTTAGAAGGTTATAATCCCCATAATTCAATTCC 20756 | | || || |||||||| || ||| | | ||||| | ||||| ||| | ||| Sbjct 754611 TGATGACTTCAAAGCTGAAGACTTTAAGGTTGAAGGGTGCAATCCGCATCCAACTATTAA 754670 Query 20757 AATGGAAATGTCTGTTTA 20774 |||||||||| ||||||| Sbjct 754671 AATGGAAATGGCTGTTTA 754688 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399149185666420