Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cebus_20capucinus_20imitator_20[refseq_20GCF_5F001604975.1_202016-
04-04] 7,156 sequences; 2,717,703,182 total letters
Query= NC_002686.2
Length=124784
Score E
Sequences producing significant alignments: (Bits) Value
seq599 264 9e-66
>seq599
Length=1005688
Score = 264 bits (292), Expect = 9e-66
Identities = 539/798 (68%), Gaps = 2/798 (0%)
Strand=Plus/Plus
Query 19978 GATCGAACCGGAACTGGAACGTTATCTGTATTTGGAATGCAATCTCGATATAACTTGAGA 20037
||||| ||||| || || || | || || || || ||||| | || || | | |||||
Sbjct 753892 GATCGCACCGGCACCGGGACCCTGTCGGTGTTCGGCATGCAGGCGCGCTACAGCCTGAGA 753951
Query 20038 AATGAATTTCCCTTATTAACTACGAAACGG-GTATTTTGGAAAGGCGTTGTTGAAGAGTT 20096
|||||||||| | | || || ||||| || || ||||| || ||| | || |||||
Sbjct 753952 GATGAATTTCCTCTGCTGACAACCAAACGTTGTGTTCTGGAAGGGTGTTTTGGAGGAGTT 754011
Query 20097 ATTATGGTTTATTAAAGGATCAACAAATTCTACCGAGCTTGTAGAAAAAGGAGTTAAGAT 20156
| || ||||| || ||| | | ||| ||| ||||| || ||||| || ||
Sbjct 754012 GCTGTGCTTTATCAAGGGACCCAGAAAG-CTAAAGAGCTGTCTTCCAAGGGAGTGAAAAT 754070
Query 20157 TTGGAGCGCACATGGATCTAAGCAATTTTTACACAGCAATGGATTTGACAACCGTCAAGA 20216
||| || ||||||| | ||| | | ||| ||||| | | | ||||
Sbjct 754071 CTGGGATGCCAATGGATCCCGAGACTTTCTGGATAGCTTGGGATTCTCCGCCAGAGAAGA 754130
Query 20217 GGGGGATTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTGAATATGTTGA 20276
||||| ||||| || || ||||| || || ||||| |||||||| || ||||| ||
Sbjct 754131 AGGGGACTTGGGCCCAGTTTATGGCTTCCAGTGGAGGCATTTTGGGGCAGAATACAGAGA 754190
Query 20277 CATGAACACAAATTATTTTGGACAAGGAGTAGATCAATTACAAAATGTTATTAATTTAAT 20336
||| | || |||||| ||||||||||| || ||| |||||| || | | | ||
Sbjct 754191 TATGGATTCAGATTATTCAGGACAAGGAGTTGACCAACTACAAAGAGTGACTGACACCAT 754250
Query 20337 TAAAACGAACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGCTAAAGATGTGCC 20396
||||| ||||| | ||||||||||| || | ||||| ||||| | | |||| | ||
Sbjct 754251 CAAAACCAACCCTGATGACAGAAGAATCATCATGTGCGCTTGGAATCCAAGAGATCTTCC 754310
Query 20397 TTTAATGGCTTTGCCTCCATGTCATATGCTATGCCAATTTTACGTTGCTAATAATGAATT 20456
| | ||||| |||||||||| ||| || ||||| || |||| | ||| ||| |
Sbjct 754311 TCTGATGGCGCTGCCTCCATGCCATGCCCTCTGCCAGTTCTACGAGGTGAATGGTGAGCT 754370
Query 20457 GTCGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTTCAATATTGC 20516
||| || || || | || |||| | || ||||| || ||||| |||||||| | ||
Sbjct 754371 GTCCTGCCAGCTGCACCAGAGATCAGGAGACATGGGCCTAGGTGTGCCTTTCAACACCGC 754430
Query 20517 AAGTTATGCGCTGCTTACGTATATGATTGCACATGTTACAGATTTAAAAACGGGTGACTT 20576
|| || | |||| ||||| |||| || || | || | | || | ||||||||
Sbjct 754431 CAGCTACACCTTGCTCACGTACGTGATCGCGCACATCACGGGCCTGAAGCCAGGTGACTT 754490
Query 20577 AGTCCACACCATAGGAGACGCGCATATTTACCTTAATCATATAGAACCTTTAAAATTACA 20636
|| || || | ||||| || ||||||||||| ||||| || | || | ||| | ||
Sbjct 754491 TGTACATACTTTGGGAGATGCCCATATTTACCTGAATCACATCAAGCCACTGAAAATTCA 754550
Query 20637 GTTAACACGACAACCAAAACAATTCCCAACTCTTCGCATTACTCGAACTGTTAAAGATAT 20696
| | ||| |||| | || ||||||| || ||| |||| ||| | | ||
Sbjct 754551 GCTTCAGCGAGAACCCAGACCTTTCCCAAAGCTCAAGATTCTTCGACAAGTTGAGAAAAT 754610
Query 20697 TAACGATTTTAAAGCTGATGATTTTGTGTTAGAAGGTTATAATCCCCATAATTCAATTCC 20756
| | || || |||||||| || ||| | | ||||| | ||||| ||| | |||
Sbjct 754611 TGATGACTTCAAAGCTGAAGACTTTAAGGTTGAAGGGTGCAATCCGCATCCAACTATTAA 754670
Query 20757 AATGGAAATGTCTGTTTA 20774
|||||||||| |||||||
Sbjct 754671 AATGGAAATGGCTGTTTA 754688
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 399149185666420
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |