Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cebus_20capucinus_20imitator_20[refseq_20GCF_5F001604975.1_202016-
04-04] 7,156 sequences; 2,717,703,182 total letters
Query= NC_003094.2
Length=130759
Score E
Sequences producing significant alignments: (Bits) Value
seq4 91.5 1e-13
>seq4
Length=15321207
Score = 91.5 bits (100), Expect = 1e-13
Identities = 157/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 24832 ATGCAGATATTTGTTAAAACCTTAACCGGCAAAACGATAACCGTCGATGTCGAATCGAGC 24891
|||||||| || || |||||| | || || || || |||||| |||| || ||| |
Sbjct 5242996 ATGCAGATTTTCGTGAAAACCCTTACGGGGAAGACCATAACCCTCGAGGTTGAACCCTCG 5243055
Query 24892 GACAGTGTAGAAACTGTTAAGGAAAAAATTGCTGCAAAAGAAGGCGTACCGGTTGACCAG 24951
|| | |||||| ||| |||| ||||| | || ||||| | || ||| |||
Sbjct 5243056 GAAACGATAGAAAATGTAAAGGCCAAAATCCAGGATAAGGAAGGAATTCCTCCTGATCAG 5243115
Query 24952 CAACGTTTAATATATGCGGGCAAACAACTGGAAGATTCCATGACTATGAACGATTACAGC 25011
||| | | || | ||| ||||| |||||||||||| ||| || || |||| |
Sbjct 5243116 CAAAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTACAAC 5243175
Query 25012 ATACAGAAAGAGGCCACGCTTCATTTAGTGTTACGATTGCGCGGAGGT 25059
|| ||||| ||| | || |||||| | ||||| |||| || || |||
Sbjct 5243176 ATTCAGAAGGAGTCTACTCTTCATCTTGTGTTGAGATTTCGTGGTGGT 5243223
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 418267518139520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |