Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cebus_20capucinus_20imitator_20[refseq_20GCF_5F001604975.1_202016-
04-04] 7,156 sequences; 2,717,703,182 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq526 161 9e-35
seq630 116 3e-21
seq80 116 3e-21
seq434 105 6e-18
seq3 100 3e-16
seq573 96.9 3e-15
seq503 93.3 4e-14
seq170 93.3 4e-14
seq142 93.3 4e-14
seq4 93.3 4e-14
seq181 91.5 1e-13
seq69 91.5 1e-13
seq63 87.8 2e-12
seq41 87.8 2e-12
seq231 86.0 6e-12
seq72 86.0 6e-12
seq448 82.4 7e-11
seq292 82.4 7e-11
seq276 82.4 7e-11
seq247 82.4 7e-11
seq38 82.4 7e-11
seq25 82.4 7e-11
seq1 82.4 7e-11
>seq526
Length=1402496
Score = 161 bits (178), Expect = 9e-35
Identities = 584/902 (65%), Gaps = 30/902 (3%)
Strand=Plus/Minus
Query 57524 AGAGAATCCCCGTAGATTTGTCATGTTTCCGATTGAATATCCAGACATTTGGAACATGTA 57583
||| || || || | |||||||| || || || || || | |||| ||| | ||| |
Sbjct 114279 AGAAAACCCTCGCCGCTTTGTCATTTTCCCCATCGAGTACCACAACATCTGGCAGATGCA 114220
Query 57584 CAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTGTCTAAGGATCTGAG 57643
|| ||||| || || || || |||| || || || ||||||||||| ||||| | |
Sbjct 114219 TAAGAAGGCGGACGCCTCCTTCTGGAGCGCTGAGGAGGTAGACCTGTCCAAGGACATACG 114160
Query 57644 CGATTGGGATTCCCTCAAAGAATCTGAGAGAAATTTTATTAAACACGTGTTGGCGTTTTT 57703
| ||||| ||||| || |||||| | ||||| ||||| |||| || |
Sbjct 114159 GCACTGGGAATCCCTGAAGCCTGAGGAGAGATACTTTATATCTCACGTTCTGGCTTTCCT 114100
Query 57704 CGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGATTTTCACAAGAAGTGCA 57763
|| ||| ||||| || || || || || ||||| || ||||| |||||| | ||
Sbjct 114099 TGCAGCAAGTGATGGCATAGTAAATGAAAACTTGGTGGAGCGATTTAGCCAAGAACTTCA 114040
Query 57764 AGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCATTGAAAACGTGCATTCAGA 57823
| || || | | || || || || || ||| | ||||| |||||| | ||||| ||
Sbjct 114039 GATTACAGAAGGCTGCTGTTTCTATGGCTTCCAAATTGCCATGGAAAACATACATTCTGA 113980
Query 57824 AATGTATTCGCTACTCATCGATACGTACGTGAAGGA---CAACGACGAGAAACGTAGACT 57880
||||||| || || ||||| || ||| | || || ||| || | || | ||
Sbjct 113979 AATGTATGGTCTCCTTATCGACACTTACATAAAAGATCCCAATGAAAGGGAATTT---CT 113923
Query 57881 GTTCAACGCGATCGAAACAATGCCCGCGATCGCCAAGAAGGCAGAGTGGTCAATCAAATG 57940
||||| || || ||||| ||||| || |||||||||||| ||| | | ||
Sbjct 113922 CTTCAATGCCATTGAAACGATGCCTTGTGTCAACAAGAAGGCAGATTGGGCCTTGCGCTG 113863
Query 57941 GAT-----AAAAAGCGCCACGGCCACGTTCGCCGAGAGGCTAATCGCGTTCGCCGCCGTC 57995
||| | |||| ||| || | | || | | | || || || || ||
Sbjct 113862 GATTGGGGACAAAG-----AGGCTACCTATGGTGAACGCGTTGTAGCCTTTGCTGCAGTG 113808
Query 57996 GAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATGAAGAAACGCGGCCTG 58055
||||| || | |||||| || ||||| | ||||| ||| | |||||| | || |||
Sbjct 113807 GAAGGCATCTACTTTTCTGGTTCTTTTGCATCCATATTCTGGCTCAAGAAATGAGGACTG 113748
Query 58056 ATGCCCGGCCTGACGTTTAGCAACGA-GTTGATATCGCGCGACGAGGGTCTCCATACTGA 58114
||||| ||||| || ||| | || || || | | || |||||| | || | |
Sbjct 113747 ATGCCTGGCCTCACATTTTCTCATGACCTTTTTAGC-AGAGATGAGGGTTTACACTCACA 113689
Query 58115 TTTTGCGTGCCTAATGTACTCTCACATTGTCAATAAACCGACGCGGGATCGCATCTTGGA 58174
|||||| ||||| |||| | ||| | || | ||||| | ||| | | ||
Sbjct 113688 TTTTGCTTGCCTGATGTTCAAACACCTAGTACACAAACCATCAGAGGAGAGAGTAAGAGA 113629
Query 58175 CATTATCACCGAGGCGGTCGCGATCGAAAATGAGTTTGTCACCGAAGCCCTACCGGTGGC 58234
|| | | | | || || ||| ||| | |||||| | || || ||| | || ||||
Sbjct 113628 AATAACTATCAATGCTGTTCGGATAGAACAAGAGTTTCTTACTGAGGCCTTGCCTGTGGA 113569
Query 58235 CATGCTCGGTATGAA---CAATGATTTGATGTCAAAGTACATTGAGTTTGTTGCCGACAG 58291
| | || ||||| || | ||| | ||| |||||||||||||| || |||||
Sbjct 113568 GCTCATTGGGATGAATTGCACTCTAATGAAG-CAA--TACATTGAGTTTGTGGCAGACAG 113512
Query 58292 ACTTTTGCTCGAACT-GATTGGAG-AGCGTCATTACAACACGAAAAATCCGTTTGATTTT 58349
|| |||| ||||| | || || | || || || | | ||||| ||||| |||
Sbjct 113511 AC--ATGCTGGAACTGGGTTTTAGCAAGGT--TTTCAGAATAGAGAATCCATTTGACTTT 113456
Query 58350 ATGAATCTGATCTCGCTCGAGGGCAAGACAAACTTTTTCGaaaaaaaaGTTAGCGAATAT 58409
||| | || || || || || ||||| ||||| || || || | ||| |||| |||
Sbjct 113455 ATGGAGAATATTTCACTGGAAGGAAAGACTAACTTCTTTGAGAAGAGAGTAGGCGAGTAT 113396
Query 58410 CA 58411
||
Sbjct 113395 CA 113394
>seq630
Length=879232
Score = 116 bits (128), Expect = 3e-21
Identities = 477/742 (64%), Gaps = 45/742 (6%)
Strand=Plus/Minus
Query 57585 AAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTGTCTAAGGATCTGAGC 57644
|| ||| | || || || |||||||||| |||||| || |||| ||| ||||| | |
Sbjct 418359 AACAAGACGGAGGCCTCCTTTTGGACCGCCGAAGAGGTGGACCCGTCCAAGGACATTCGG 418300
Query 57645 GATTGGGATTCCCTCAAAGAATCTGAGAGAAATTTTATTAAACACGTGTTGGCGTTTTTC 57704
| ||||| ||||| || |||||| | ||||| ||||| || || ||
Sbjct 418299 CACTGGGAATCCCTGAAGCCCGAGGAGAGACACTTTATATCCCACGTTCTGAGTTTCTTT 418240
Query 57705 GCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGATTTTCACAAGAAGTGCAA 57764
|| ||| || || || || || || || ||||| || ||||| |||||||| ||
Sbjct 418239 GCAGCAAGTGACGGCATAGTAAATGAAAACTTGGTGGAGCGATTTAGCCAAGAAGTTCAG 418180
Query 57765 GTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCATTGAAAACGTGCATTCAGAA 57824
| || ||||| | || || || ||||| ||| | | ||| || ||| | ||||| |||
Sbjct 418179 ATTACAGAGGCCCGCTGTTTCTATGGATTCCAAATTGGCATGGACAACATACATTCTGAA 418120
Query 57825 ATGTATTCGCTACTCATCGATACGTACGTGAAGGA---CAACGACGAGAAACGTAGACTG 57881
|||||| || || | || ||||| | || || || ||| | || | ||
Sbjct 418119 ATGTATAGTCTCCTTACTGACACGTATATAAAAGATCCCAGCGAAAGGGAATTT---CTC 418063
Query 57882 TTCAACGCGATCGAAACAATGCCCGCGATCGCCAAGAAGGCAGAGTGGTCAATCAAATGG 57941
||||| || || ||||| ||||| || ||||||||||| || | | |||
Sbjct 418062 TTCAATGCCATTGAAACGATGCCTTGTGTCAAGAAGAAGGCAGACCGGGCCTTGCGCTGG 418003
Query 57942 AT-----AAAAAGCGCCACGGCCACGTTCGCCGAGAGGCTAATCGCGTTCGCCGCCGTCG 57996
|| | |||| ||| || | || || || || || || || |
Sbjct 418002 ATTGGGGACAAAG-----AGGCTACCT-------ATGGTGAACTGCCTTTGCTGCAGTGG 417955
Query 57997 AAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATGAAGAAACGCGGCCTGA 58056
|||| | |||||||| || || || | ||||| ||| | |||||||| || ||||
Sbjct 417954 AAGGCGTCTTCTTTTCTGGTTCTTTAGCTTCCATATTCTGGCTTAAGAAACGAGGACTGA 417895
Query 58057 TGCCCGGCCTGACGTTTAGCAACG-AGTTGATATCGCGCGACGAGGGTCTCCATACTGAT 58115
|||| ||||| || ||| || | | || || | | || |||||| | || ||||
Sbjct 417894 TGCCTGGCCTCACATTTTCTAATGAACTTTTTAGC-AGAGATGAGGGTTTACACTGTGAT 417836
Query 58116 TTTGCGTGCCTAATGTACTCTCACATTGTCAATAAACC----GACGCGGGATCGCATCTT 58171
||||| ||||| |||| | ||| | || | ||||| || ||||| | |
Sbjct 417835 TTTGCTTGCCTGATGTTCCAACACCTAGTACACAAACCATCAGAGCCGGGA--GAA--AG 417780
Query 58172 GGACATTATCACCGAGGCGGTCGCGATCGAAAATGAGTTTGTCACCGAAGCCCTACCGGT 58231
|| || || | | | || || ||| ||| | ||||| |||| || | | || ||
Sbjct 417779 AGAAATAATTATCAATGCTGTTCGGATAGAACAGGAGTTCCTCACTGAGATCTTGCCTGT 417720
Query 58232 GGCCATGCTC---GGTATGAA---CAATGATTTGATGTCAAAGTACATTGAGTTTGTTGC 58285
| | |||| || ||||| || | ||| | ||| |||||||||||||| ||
Sbjct 417719 G---AAGCTCATTGGGATGAATTGCACTCTAATGAAG-CAA--TACATTGAGTTTGTGGC 417666
Query 58286 CGACAGACTTTTGCTCGAACTG 58307
||||||||| |||| ||||||
Sbjct 417665 AGACAGACTTATGCTGGAACTG 417644
>seq80
Length=8459403
Score = 116 bits (128), Expect = 3e-21
Identities = 115/149 (77%), Gaps = 0/149 (0%)
Strand=Plus/Plus
Query 23048 ACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACATAGATTGCTACACTTTATCGTG 23107
||||| |||||| ||||||||||| ||||| || || || ||||| || || || ||
Sbjct 1287399 ACCTCATCTTTGCTGGTGTACTCTACTATTTCTGTGCACAGGTTGCTGCATTTGATGGTT 1287458
Query 23108 CCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGCGTG 23167
|||| || ||||||||| || ||||| || ||||| || |||||||| ||||| ||
Sbjct 1287459 CCCAGGTTCTGCTGGTTGCTCTTCCGATTACAGGAATCTTTATAGAGCATATACGGGGTA 1287518
Query 23168 CCCGTCTCGACCTGCGACTCGATGATCGC 23196
|| ||||| ||| ||||||||||| ||
Sbjct 1287519 CCTGTCTCTGTCTGAGACTCGATGATGGC 1287547
>seq434
Length=1819716
Score = 105 bits (116), Expect = 6e-18
Identities = 158/222 (71%), Gaps = 2/222 (1%)
Strand=Plus/Minus
Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249
|| ||||| |||||||| || || || ||||| || || |||||| |||| ||||||||
Sbjct 1331511 AAAATGCAGATTTTCGTGAAAACCCTTACAGGGAAGACCATCACCCTCGAGGTTGAACCC 1331452
Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309
|| || | | |||| || || | || ||| |||||||| | || || ||
Sbjct 1331451 TCGGATACGATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGAT 1331392
Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGCGATTA 31368
||||| | || || || |||||||| || ||||||| | | | ||| || || ||
Sbjct 1331391 CAGCAAAGACTGATCTTTGCTGGCAAGCAACTGGAAGA-TGGACGTACTTTGTCTGACTA 1331333
Query 31369 TAACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACT 31410
||||||||| || || || ||||||||||| || | |||||
Sbjct 1331332 TAACATTCAGAAGGAGTCTACTCTTCATCTTGTGTTGAGACT 1331291
>seq3
Length=16812482
Score = 100 bits (110), Expect = 3e-16
Identities = 157/222 (71%), Gaps = 2/222 (1%)
Strand=Plus/Minus
Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249
|| ||||| |||||||| || || || || || || || |||||| |||| ||||||||
Sbjct 14707073 AAAATGCAGATTTTCGTGAAAACCCTTACGGGGAAGACCATCACCCTCGAGGTTGAACCC 14707014
Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309
|| || | | |||| || || | || ||| |||||||| | || || ||
Sbjct 14707013 TCAGATATGATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGAT 14706954
Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGCGATTA 31368
||||| | || || || |||||||| || ||||||| | | | ||| || || ||
Sbjct 14706953 CAGCAAAGACTGATCTTTGCTGGCAAGCAACTGGAAGA-TGGACGTACTTTGTCTGACTA 14706895
Query 31369 TAACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACT 31410
|||||||| || || || ||||||||||| || || |||||
Sbjct 14706894 CAACATTCAGAAGGAGTCTACTCTTCATCTTGTGCTGAGACT 14706853
>seq573
Length=1150292
Score = 96.9 bits (106), Expect = 3e-15
Identities = 156/222 (70%), Gaps = 2/222 (1%)
Strand=Plus/Minus
Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249
|| ||||| |||||||| || || || || || || || |||||| |||| ||||||||
Sbjct 200699 AAAATGCAGATTTTCGTGAAAACCCTTACGGGGAAGACCATCACCCTCGAGGTTGAACCC 200640
Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309
|| || | | |||| || || | || ||| |||||||| | || || ||
Sbjct 200639 TCGGATACGATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGAT 200580
Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGCGATTA 31368
||||| | || || || |||||||| || ||||||| | | | ||| || || ||
Sbjct 200579 CAGCAAAGACTGATCTTTGCTGGCAAGCAACTGGAAGA-TGGACGTACTTTGTCTGACTA 200521
Query 31369 TAACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACT 31410
|||||||| || || || ||||||||||| || | |||||
Sbjct 200520 CAACATTCAGAAGGAGTCTACTCTTCATCTTGTGTTGAGACT 200479
>seq503
Length=1449082
Score = 93.3 bits (102), Expect = 4e-14
Identities = 155/219 (71%), Gaps = 5/219 (2%)
Strand=Plus/Plus
Query 31187 TCAAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAA 31246
||||| ||| | || ||||| ||||| ||||| ||||| || |||||| | || || ||
Sbjct 1047033 TCAAA-ATGTATATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCTTGGAGGTGGAG 1047091
Query 31247 CCGTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCC 31306
|| |||| |||||| || || | || ||| ||||||||| | || ||
Sbjct 1047092 CCTAGTGACACCATCGAAAATGTGAAGGCCAAGATCCAGGATAAGGAAGGCATCCC--CC 1047149
Query 31307 GACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGCGA 31365
||||||||| | || || || || ||||| ||| ||||||| | || ||| | ||
Sbjct 1047150 GACCAGCAGAGGCTCATCTTTGCAGGCAAGCAGCTGGAAGA-TGGCTGCACTCTCTCTGA 1047208
Query 31366 TTATAACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404
||| ||||| || ||||| ||||| || || ||||| ||
Sbjct 1047209 TTACAACATCCAGAAAGAGTCGACCCTGCACCTGGTCCT 1047247
>seq170
Length=4466143
Score = 93.3 bits (102), Expect = 4e-14
Identities = 150/213 (70%), Gaps = 2/213 (1%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| || ||||| ||||| ||||| ||||| || |||||| |||| || || ||
Sbjct 3883455 ATGCAGATCTTCGTGAAGACACTGACCGGCAAGACCATCACCCTCGAGGTGGAGCCCAGT 3883396
Query 31253 GACAGTGTCGAAACGGTCAAA-CAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311
|||| | || | ||||| || ||| | ||||||||||||| | || || |||||
Sbjct 3883395 GACACCATTGAGAACGTCAAGGCAAAGA-TCCAGGACAAGGAAGGCATCCCTCCTGACCA 3883337
Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371
|||| | | || || || || || ||| ||||||| || || || || ||
Sbjct 3883336 GCAGAGGTTGATCTTTGCCGGAAAGCAGCTGGAAGATGGGCGCACCCTGTCTGACTACAA 3883277
Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404
||| |||||||| || || ||||| ||||| ||
Sbjct 3883276 CATCCAAAAAGAGTCCACCCTTCACCTGGTCCT 3883244
>seq142
Length=5139840
Score = 93.3 bits (102), Expect = 4e-14
Identities = 153/221 (69%), Gaps = 0/221 (0%)
Strand=Plus/Minus
Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249
|| ||||| |||||||| || || || ||||| || || |||| | |||| ||||||||
Sbjct 3725397 AAAATGCAGATTTTCGTGAAAACCCTTACAGGGAAGACCATCAACCTCGAGGTTGAACCC 3725338
Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309
|| || | | |||| || || | || ||| |||||||| | || || |
Sbjct 3725337 TCGGATACGATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGGT 3725278
Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTAT 31369
||||| | || || || |||||||| || |||||||| ||| || || ||
Sbjct 3725277 CAGCAAGGACTGATCTTTGCTGGCAAGCAACTGGAAGACAGACGTACTTTGTTTGACTAC 3725218
Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACT 31410
|||||||||| || || ||||||||||| || | |||||
Sbjct 3725217 AACATTCAAAGGGAGTCTACTCTTCATCTTGTGTTGAGACT 3725177
>seq4
Length=15321207
Score = 93.3 bits (102), Expect = 4e-14
Identities = 150/213 (70%), Gaps = 2/213 (1%)
Strand=Plus/Plus
Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249
|| ||||| |||||||| || || || || || || || || ||| |||| ||||||||
Sbjct 5242993 AAAATGCAGATTTTCGTGAAAACCCTTACGGGGAAGACCATAACCCTCGAGGTTGAACCC 5243052
Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309
|| || | | |||| || || | ||| ||| |||||||| | || || ||
Sbjct 5243053 TCGGAAACGATAGAAAATGTAAAGGCCAAAATCCAGGATAAGGAAGGAATTCCTCCTGAT 5243112
Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGCGATTA 31368
||||| | || || || |||||||| || ||||||| | | | ||| || || ||
Sbjct 5243113 CAGCAAAGACTGATCTTTGCTGGCAAGCAACTGGAAGA-TGGACGTACTTTGTCTGACTA 5243171
Query 31369 TAACATTCAAAAAGAATCGACTCTTCATCTGGT 31401
|||||||| || || || ||||||||||| ||
Sbjct 5243172 CAACATTCAGAAGGAGTCTACTCTTCATCTTGT 5243204
>seq181
Length=4179193
Score = 91.5 bits (100), Expect = 1e-13
Identities = 155/222 (70%), Gaps = 2/222 (1%)
Strand=Plus/Minus
Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249
|| ||||| |||||||| || || || || || || || |||||| |||| ||||||||
Sbjct 2580696 AAAATGCAGATTTTCGTGAAAACCCTTACGGGGAAGACCATCACCCTCGAGGTTGAACCC 2580637
Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309
|| || | | |||| || || | || ||| |||||||| | | || ||
Sbjct 2580636 TCGGATACGATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCGTCCTGAT 2580577
Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGCGATTA 31368
||||| | || || || |||||||| || ||||||| | | | ||| || || ||
Sbjct 2580576 CAGCAAAGACTGATCTTTGCTGGCAAGCAACTGGAAGA-TGGACGTACTTTGTCTGACTA 2580518
Query 31369 TAACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACT 31410
|||||||| || || || ||||||||||| || | |||||
Sbjct 2580517 CAACATTCAGAAGGAGTCTACTCTTCATCTTGTGTTGAGACT 2580476
>seq69
Length=11786368
Score = 91.5 bits (100), Expect = 1e-13
Identities = 155/222 (70%), Gaps = 2/222 (1%)
Strand=Plus/Plus
Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249
|| ||||| |||||||| || || || ||||| || || |||| | |||| ||||||||
Sbjct 9297008 AAAATGCAGATTTTCGTGAAAACCCTTACAGGGAAGACCATCAACCTCGAGGTTGAACCC 9297067
Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309
| || | | |||| || || | || || ||||||||| | || || ||
Sbjct 9297068 TTGGATACTACAGAAAATGTAAAGGCCAAGATCCAAGATAAGGAAGGCATTCCTCCTGAT 9297127
Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGCGATTA 31368
||||| | || || || |||||||| || ||||||| | | | ||| || || ||
Sbjct 9297128 CAGCAAAGACTGATCTTTGCTGGCAAGCAACTGGAAGA-TGGAGGTACTTTGTCTGACTA 9297186
Query 31369 TAACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACT 31410
|||||||| || || || ||||||||||| || | |||||
Sbjct 9297187 CAACATTCAGAAGGAGTCTACTCTTCATCTTGTGTTGAGACT 9297228
>seq63
Length=8132274
Score = 87.8 bits (96), Expect = 2e-12
Identities = 160/228 (70%), Gaps = 5/228 (2%)
Strand=Plus/Minus
Query 31185 AATCAAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTG 31244
|| |||| ||||| |||||||| || || || | || || || |||||| |||| ||||
Sbjct 6710567 AACCAAA-ATGCAGATTTTCGTGAAAACCCTTATGGGGAAGACCATCACCCTCGAGGTTG 6710509
Query 31245 AACCGTCCGACAGTGTCGAAACGGTCAA-ACAGAGAATAGCGGACAAGGAAGGCGTGCCG 31303
|||| || || | | |||| || || || || | ||| |||||||| | ||
Sbjct 6710508 AACCCTCGGATACGATAGAAAATGTAAAGACCAAGG-TCCAGGATAAGGAAGGAATTCCT 6710450
Query 31304 CCCGACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAG 31362
|| || ||||| | || || || |||||||| || |||||| | | | ||| ||
Sbjct 6710449 CCTGATCAGCAAAGACTGATCTTTGCTGGCAAGCAACTGGAAGG-TGGACGTACTTTGTC 6710391
Query 31363 CGATTATAACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACT 31410
|| || |||||||| || || || ||||||||||| || | |||||
Sbjct 6710390 TGACTACAACATTCAGAAGGAGTCTACTCTTCATCTTGTGTTGAGACT 6710343
>seq41
Length=9995516
Score = 87.8 bits (96), Expect = 2e-12
Identities = 143/201 (71%), Gaps = 4/201 (2%)
Strand=Plus/Plus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| || ||||| ||||||||||| ||||| || |||||| |||| || || ||
Sbjct 7312095 ATGCAGATCTTCGTGAAGACTCTGACTGGCAAGACCATCACCCTCGAGGTCGAGCCCGGT 7312154
Query 31253 GACAGTGTCGA-AACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311
|||| | || ||||| | || || || |||||| |||||| | || || |||||
Sbjct 7312155 GACACCATTGAGAACGGCAAGGCAAAG-ATCCAGGACAAAGAAGGCATCCCTCCTGACCA 7312213
Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGCGATTATA 31370
|||| | || || ||||| |||||| ||||||| | ||| || | || || |
Sbjct 7312214 GCAGAGATCCATCTTTGCTGGGAAACAGCTGGAAGA-TGGATGCACCCTATCTGACTACA 7312272
Query 31371 ACATTCAAAAAGAATCGACTC 31391
|||| || ||||| || ||||
Sbjct 7312273 ACATCCAGAAAGAGTCCACTC 7312293
>seq231
Length=3498576
Score = 86.0 bits (94), Expect = 6e-12
Identities = 149/214 (70%), Gaps = 2/214 (1%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| || || || ||||| ||||| || || || |||||| | || || || ||
Sbjct 69782 ATGCAGATATTAGTGAAGACCCTGACTGGTAAGACCATCACCCTTGAGGTCGAGCCCAGT 69723
Query 31253 GACAGTGTCGAAACGGTCAAA-CAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311
|||| | || | ||||| || ||| | ||||||||||||| | || || |||||
Sbjct 69722 GACACCATTGAGAACGTCAAGGCAAAGA-TCCAGGACAAGGAAGGCATCCCTCCTGACCA 69664
Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371
|| | | | || || ||||| || ||| ||||||| || || || || ||
Sbjct 69663 GCGGAGGTTGATCTTTGCTGGAAAGCAGCTGGAAGATGGGCACACCCTGTCTGACTACAA 69604
Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTT 31405
||| |||||||| || ||||| |||||||||||
Sbjct 69603 CATCCAAAAAGAGTCCACTCTATATCTGGTACTT 69570
>seq72
Length=7750101
Score = 86.0 bits (94), Expect = 6e-12
Identities = 158/225 (70%), Gaps = 5/225 (2%)
Strand=Plus/Minus
Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAA-ACGATCACCGTCGACGTTGAACC 31248
|| ||||| ||||| || || ||||| || || ||| || || ||| |||| ||||||||
Sbjct 2356206 AAAATGCAGATTTTTGTGAAAACTCTTACGGGGAAAGACCATTACCCTCGAGGTTGAACC 2356147
Query 31249 GTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGA 31308
|| || | | |||| || || | ||| ||| |||||||| | || || ||
Sbjct 2356146 CTCGGATACGATAGAAAATGTAAAGGCCAAAATCCAGGATAAGGAAGGAATTCCTCCTGA 2356087
Query 31309 CCAGCAGCGTCTAATATTCGCTGGCAA-ACAGTTGGAAGACTCTATG-ACTATGAGCGAT 31366
||||| | || || || |||||||| ||| | |||||| | | | ||| | ||
Sbjct 2356086 TCAGCAAAGACTGATCTTTGCTGGCAAGACACT-GGAAGA-TGGACGCACTTTATCTGAC 2356029
Query 31367 TATAACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTG 31411
|| |||||||| || || || ||||||||||| || | ||||||
Sbjct 2356028 TACAACATTCAGAAGGAGTCTACTCTTCATCTTGTGTTGAGACTG 2355984
>seq448
Length=1724199
Score = 82.4 bits (90), Expect = 7e-11
Identities = 111/155 (72%), Gaps = 0/155 (0%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| || | || ||||| || || ||||| || |||||| | || ||| ||||
Sbjct 142261 ATGCAGATCTCTGTGAAGACCCTCACTGGCAAGACCATCACCCTTGAGGTTAAACCCAGT 142202
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| | |||| |||||| | ||| |||||||| || | | || ||||||
Sbjct 142201 GACACCATTGAAAATGTCAAAGCCACAATTCAAGACAAGGAGGGTATCCTACCTGACCAG 142142
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGA 31347
|||| ||| ||||| |||||||||||| |||| ||
Sbjct 142141 CAGCATCTGATATTTGCTGGCAAACAGCTGGAGGA 142107
>seq292
Length=4239571
Score = 82.4 bits (90), Expect = 7e-11
Identities = 153/222 (69%), Gaps = 2/222 (1%)
Strand=Plus/Minus
Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249
|| ||||| |||||||| || || || || || || || |||||| |||| ||||||||
Sbjct 2944190 AAAATGCAGATTTTCGTGAAAACCCTTACGGGGAAGACCATCACCCTCGAGGTTGAACCC 2944131
Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309
|| || | | |||| || || | || ||| |||||||| | || || ||
Sbjct 2944130 TCGGATACGATAGAAAATGTAAAGGTCAAGATCCAGGATAAGGAAGGAATTCCTCCTGAT 2944071
Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGCGATTA 31368
||||| | || || || |||||||| | ||||| | | | | ||| || || ||
Sbjct 2944070 CAGCAAAGACTGATCTTTGCTGGCAAGGAACTGGAATA-TGGACGCACTTTGTCTGACTA 2944012
Query 31369 TAACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACT 31410
|| ||||| || || || ||||||||||| || | |||||
Sbjct 2944011 CAATATTCAGAAGGAGTCTACTCTTCATCTTGTGTTGAGACT 2943970
>seq276
Length=3089952
Score = 82.4 bits (90), Expect = 7e-11
Identities = 145/212 (68%), Gaps = 7/212 (3%)
Strand=Plus/Plus
Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249
|| ||||| |||||| | || || || | || || || |||||| | || ||||||||
Sbjct 1637880 AAAATGCAGATTTTCATGAAAACCCTTATGGGGAAGACCATCACCCTTGAGGTTGAACCC 1637939
Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309
|| || | | |||| || || | || ||| |||||||| | || || ||
Sbjct 1637940 TCAGATACAATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGAT 1637999
Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTAT 31369
||||| | || || || |||||||| || |||||| |||| || || |||
Sbjct 1638000 CAGCAAAGACTGATCTTTGCTGGCAAGCAACTGGAAG-------GACTTTGTCTGACTAT 1638052
Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGT 31401
|||||||| || || || ||||||||||| ||
Sbjct 1638053 AACATTCAGAAGGAGTCTACTCTTCATCTTGT 1638084
>seq247
Length=3354634
Score = 82.4 bits (90), Expect = 7e-11
Identities = 120/170 (71%), Gaps = 0/170 (0%)
Strand=Plus/Minus
Query 31178 CGAATTGAATCAAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTC 31237
|||||||| || | ||||| || || || | ||| || | |||||| || |||||| |
Sbjct 2998464 CGAATTGACGCAGAGATGCAGATCTTTGTGAGGACCCTCAAAGGCAAGACCATCACCCTT 2998405
Query 31238 GACGTTGAACCGTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGC 31297
|| ||||| || |||| | | | |||||| | ||| |||||||| ||
Sbjct 2998404 GAGGTTGAGCCCAGTGACACCATTAAGAATGTCAAAGCCAAAATTCAAGACAAGGAGGGT 2998345
Query 31298 GTGCCGCCCGACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGA 31347
| || | |||||||||| ||| ||||| |||||||||||| |||| ||
Sbjct 2998344 ATCCCATCTGACCAGCAGCATCTGATATTTGCTGGCAAACAGCTGGAGGA 2998295
>seq38
Length=10264441
Score = 82.4 bits (90), Expect = 7e-11
Identities = 155/224 (69%), Gaps = 7/224 (3%)
Strand=Plus/Plus
Query 31184 GAATCAAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTT 31243
|| ||| | ||||| || || || ||||| || | ||||| || |||||| | || ||
Sbjct 9540638 GACTCAGAGATGCAGATCTTTGTGAAGACCCTCATGGGCAAGACCATCACCCTTGAGGTC 9540697
Query 31244 GAACC-GTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCC 31302
|| || || |||| | || | |||||| | ||| |||||||| || | ||
Sbjct 9540698 GAGCCCGT--GACACCATTGAGAATGTCAAAGCCAAAATTCAAGACAAGGAGGGTATCCC 9540755
Query 31303 GCCCGACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGA--CTCTATGACTATG 31360
|| |||||||||||||| ||||| || ||||||||| |||| || | ||| |
Sbjct 9540756 ACCTGACCAGCAGCGTCTGATATTTGCCGGCAAACAGCTGGAGGATGGCCACACACTCTC 9540815
Query 31361 AGCGATTATAACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404
| || || ||||| || ||||| || || || || ||||| ||
Sbjct 9540816 A--GACTACAACATCCAGAAAGAGTCCACCCTGCACCTGGTGCT 9540857
>seq25
Length=15232693
Score = 82.4 bits (90), Expect = 7e-11
Identities = 153/222 (69%), Gaps = 2/222 (1%)
Strand=Plus/Minus
Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249
|| ||||| |||||| | || ||||| || | || || |||| | || | | ||||||
Sbjct 12145470 AAAATGCAGATTTTCATGAAAACTCTTACGGAGAAGACTATCATCCTCCAGGCTGAACCC 12145411
Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309
|| || | |||| || || | || ||| |||||||| | || || ||
Sbjct 12145410 TCAGATACGAAAGAAAACGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGAT 12145351
Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGCGATTA 31368
||||| | || || | |||||||| || | ||||| | ||| ||| || || ||
Sbjct 12145350 CAGCAAAGACTGATCTATGCTGGCAAGCAACTAGAAGA-TGGATGTACTCTGTCTGACTA 12145292
Query 31369 TAACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACT 31410
||||||||||| || || |||||||||||||| || |||||
Sbjct 12145291 CAACATTCAAAAGGAGTCTACTCTTCATCTGGTGCTGAGACT 12145250
>seq1
Length=21314971
Score = 82.4 bits (90), Expect = 7e-11
Identities = 146/212 (69%), Gaps = 2/212 (1%)
Strand=Plus/Plus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| || || || |||||| | || ||||| || |||||| | || || || ||
Sbjct 18630932 ATGCAGATCTTTGTGAAGACTGTCACGGGCAAGACCATCACCCTTGAGGTCGAGCCCAGT 18630991
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| | | | |||||| | ||| |||||||||| | || || ||||||
Sbjct 18630992 GACACCATTAAGAATGTCAAAGCCAAAATTCAATACAAGGAAGGTATCCCACCTGACCAG 18631051
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
|||||||| ||||| ||||| |||||| |||| || ||| | | || || |||
Sbjct 18631052 CAGCGTCTGATATTTGCTGGTAAACAGCTGGAGGATGGCCGCACTCTCA--GACTACAAC 18631109
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404
|| || ||||| || || || || ||||| ||
Sbjct 18631110 ATCCAGAAAGAGTCCACCCTGCACCTGGTGCT 18631141
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445726526195520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |