Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cebus_20capucinus_20imitator_20[refseq_20GCF_5F001604975.1_202016-
04-04] 7,156 sequences; 2,717,703,182 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq526 407 2e-108
seq630 343 2e-89
seq28 246 4e-60
seq145 224 1e-53
seq867 150 2e-31
seq2 123 3e-23
seq80 111 2e-19
seq57 102 1e-16
seq563 89.7 6e-13
>seq526
Length=1402496
Score = 407 bits (450), Expect = 2e-108
Identities = 658/939 (70%), Gaps = 18/939 (2%)
Strand=Plus/Plus
Query 33235 TTTAAAAGTCAACATCTAAAGAAAAATGATTGTCTTCTTGA---GACATAACTCCCATTT 33291
|||| || ||| || | || | |||| ||| ||| | || ||||| ||||||||
Sbjct 113332 TTTAGAAATCAGCACCCAAGGTAAAAGAATTCTCTGTTGGACTTGACATCACTCCCATCC 113391
Query 33292 TTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTTT 33351
| || || || || || | || || || || ||||| |||||||||| ||| ||||| |
Sbjct 113392 TCTGATACTCGCCTACTCTCTTCTCAAAGAAGTTAGTCTTTCCTTCCAGTGAAATATTCT 113451
Query 33352 CCATGAAATCAAACGGATTGGTAACATTGTAAAtttttttAAATCCCAATTCAGAAATCA 33411
|||| || ||||| ||||| | || ||| || |||| |||| ||| ||
Sbjct 113452 CCATAAAGTCAAATGGATTCTCTATTCTGAAAACCTTGCTAAAACCCAGTTCCAGCATG- 113510
Query 33412 ATCTATCTGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATGAGTT 33471
||| ||||| || || || || ||| ||||| | |||||||| || ||||| |
Sbjct 113511 -TCTGTCTGCCACAAACTCAATGTATTGCTTCATTAGAGTGCAATTCATCCCAATGAGCT 113569
Query 33472 TAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATGGATACCGCATTTGTTATAATAA 33531
|| || | ||| |||||||||| |||||||| || || ||||| | | ||
Sbjct 113570 CCACAGGCAAGGCCTCAGTAAGAAACTCTTGTTCTATCCGAACAGCATTGATAGTTATTT 113629
Query 33532 ATCTAACGGTTTCTTCACTCGGTGGATGTAATAAATGTTTAAACATCAAACATGCGAAAT 33591
||| || | || || ||| |||| || ||||| ||||||| || || ||||
Sbjct 113630 CTCTTACTCTCTCCTCTGATGGTTTGTGTACTAGGTGTTTGAACATCAGGCAAGCAAAAT 113689
Query 33592 CGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGGCATTA 33651
|||| | |||||| ||||| |||| | || | |||||| ||||| || ||||| |
Sbjct 113690 GTGAGTGTAAACCCTCATCTCTGCTAAAAAGGTCATGAGAAAATGTGAGGCCAGGCATCA 113749
Query 33652 GGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTCCTTCTA 33711
| || | || || ||||| |||||||| || || || || |||||| |||| ||||| |
Sbjct 113750 GTCCTCATTTCTTGAGCCAGAATATGGATGCAAAAGAACCAGAAAAGTAGATGCCTTCCA 113809
Query 33712 CTGCAGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCGCTGTCATGTATCCACTTTT 33768
||||||||||||| | || | || ||||| | | | |||| |||||
Sbjct 113810 CTGCAGCAAAGGCTACAACGCGTTCACCATAGGTAGCCTCTTTGTCCCCAATCCAGCGCA 113869
Query 33769 GAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAGt 33828
|||||||| |||||||| || ||||||||||||||||| |||||||| |||||| | |
Sbjct 113870 AGGCCCAATCTGCCTTCTTGTTGACACAAGGCATCGTTTCAATGGCATTGAAGAGAAATT 113929
Query 33829 ttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAA 33888
||||||| |||||| | ||||| ||||| | |||| ||||||||| ||||| |
Sbjct 113930 CCCTTTCATTGGGATCTTTTATGTAAGTGTCGATAAGGAGACCATACATTTCAGAATGTA 113989
Query 33889 TGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCC-TCGGTAATCTGCACTTCT 33947
||||||| ||||| || || || || |||||||| | |||| || |||||||| | ||||
Sbjct 113990 TGTTTTCCATGGCAATTTGGAAGCCATAGAAACAGC-AGCCTTCTGTAATCTGAAGTTCT 114048
Query 33948 GTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCATCACTGGCTGCAAAAAACGCC 34007
| |||||| || | || |||||||| ||||| |||||||| ||||||| || |||
Sbjct 114049 TGGCTAAATCGCTCCACCAAGTTTTCATTTACTATGCCATCACTTGCTGCAAGGAAAGCC 114108
Query 34008 AATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTG----AT 34063
| || || |||||| ||| | || || || | || ||||| || || ||
Sbjct 114109 AGAACGTGAGATATAAAGTATCTCTCCTCAGGCTTCAG-GGATTCC---CAGTGCCGTAT 114164
Query 34064 ATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACAT 34123
|| || || | || || || || | |||| || || || || ||||| |||| |||
Sbjct 114165 GTCCTTGGACAGGTCTACCTCCTCAGCGCTCCAGAAGGAGGCGTCCGCCTTCTTATGCAT 114224
Query 34124 ATTCCAGATGTCATGATATTGGATTGGGAAAATAACAAA 34162
| |||||||| || || | ||| |||||||| |||||
Sbjct 114225 CTGCCAGATGTTGTGGTACTCGATGGGGAAAATGACAAA 114263
>seq630
Length=879232
Score = 343 bits (380), Expect = 2e-89
Identities = 621/900 (69%), Gaps = 35/900 (4%)
Strand=Plus/Plus
Query 33235 TTTAAAAGTCAACATCTAAAGAAAAATGATTGTCTTCTTGA---GACATAACTCCCATTT 33291
|||| |||||| |||| || |||| ||| ||| || |||| ||||||||
Sbjct 417478 TTTAGAAGTCAGCATCCAAGATAAAAGAATTCTCTGTGGGACTTGACACCACTCCCATCC 417537
Query 33292 TTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTTT 33351
| | | ||||| || | || || || || ||| | |||||||||| || ||||| |
Sbjct 417538 TCTAATGCTCACCTACTCTCTTCTCAAAGAAGTTAATCTTTCCTTCCAGTGGAATATTCT 417597
Query 33352 CCATGAAATCAAACGGATTGGTAACATTGTAAAtttttttAAATCCCAATTCAGAAATCA 33411
|||| || ||||| ||||| || || ||| || |||| |||| ||| || |
Sbjct 417598 CCATAAAGTCAAATGGATTCTCTACTCTGAAAACCTTGCTAAAACCCAGTTCCAGCATAA 417657
Query 33412 ATCTATCTGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATGAGTT 33471
||| ||||| || || || || ||| ||||| | |||||||| || ||||| |
Sbjct 417658 GTCTGTCTGCCACAAACTCAATGTATTGCTTCATTAGAGTGCAATTCATCCCAATGAGCT 417717
Query 33472 TAACTGG-AAGAGCCACAGTAAGAAATTCTTGTTCAATGGATACCGCATTTGTTATAATA 33530
| || || |||| | |||| || || || ||||| || || ||||| | || ||
Sbjct 417718 TCACAGGCAAGATCT-CAGTGAGGAACTCCTGTTCTATCCGAACAGCATTGATAATTATT 417776
Query 33531 AATCTAACGGTTTCTTCA--CTCGG-TGGAT---GTAATAAATGTTTAAACATCAAACAT 33584
||| |||| | ||| | ||| | ||| || |||| ||||||| ||
Sbjct 417777 TCTCT------TTCTCCCGGCTCTGATGGTTTGTGTACTAGGTGTTGGAACATCAGGCAA 417830
Query 33585 GCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCG 33644
|| ||||| ||||| | |||||| ||||| |||| | ||| |||||||| ||||| ||
Sbjct 417831 GCAAAATCACAGTGTAAACCCTCATCTCTGCTAAAAAGTTCATTAGAAAATGTGAGGCCA 417890
Query 33645 GGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATT 33704
||||| || || || || |||||||| ||||||||||| || || || ||||||||||
Sbjct 417891 GGCATCAGTCCTCGTTTCTTAAGCCAGAATATGGAAGCTAAAGAACCAGAAAAGAAGACG 417950
Query 33705 CCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCGCTGTCATGTATC 33761
||||| ||||||||||||||| | || ||||| | | | |||| |||
Sbjct 417951 CCTTCCACTGCAGCAAAGGCAGT-------TCACCATAGGTAGCCTCTTTGTCCCCAATC 418003
Query 33762 CACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAG 33821
|| |||| || |||||||| || ||||||||||||||||| |||||||| |||
Sbjct 418004 CAGCGCAAGGCCCGGTCTGCCTTCTTCTTGACACAAGGCATCGTTTCAATGGCATTGAAG 418063
Query 33822 AGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCC 33881
||| | | |||| | |||||| | ||| || || | | ||||||||||||||
Sbjct 418064 AGAAATTCCCTTTCGCTGGGATCTTTTATATACGTGTCAGTAAGGAGACTATACATTTCA 418123
Query 33882 GAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGC 33941
||||| ||||| || ||| | || || ||||| |||||||| | ||||| ||||||||
Sbjct 418124 GAATGTATGTTGTCCATGCCAATTTGGAATCCATAGAAACAGCGGGCCTCTGTAATCTGA 418183
Query 33942 ACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCATCACTGGCTGCAAAA 34001
|||||| | |||||| || | || |||||||| ||||| || ||||| ||||||||
Sbjct 418184 ACTTCTTGGCTAAATCGCTCCACCAAGTTTTCATTTACTATGCCGTCACTTGCTGCAAAG 418243
Query 34002 AACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTG 34061
|| || || || |||||| | | | || || || | || ||||| || ||
Sbjct 418244 AAACTCAGAACGTGGGATATAAAGTGTCTCTCCTCGGGCTTCAG-GGATTCC---CAGTG 418299
Query 34062 ----ATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTT 34117
|| || || || ||||| ||||| | |||||||| || ||||| | ||| ||
Sbjct 418300 CCGAATGTCCTTGGACGGGTCCACCTCTTCGGCGGTCCAAAAGGAGGCCTCCGTCTTGTT 418359
>seq28
Length=17023488
Score = 246 bits (272), Expect = 4e-60
Identities = 545/810 (67%), Gaps = 12/810 (1%)
Strand=Plus/Minus
Query 63269 TCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTTGTTCTATGTTC 63328
|| |||||| |||||| | | |||||||||||| ||| |||||||| | | |||||
Sbjct 16623679 TCATTTCATGAAGAGAGCTGCAATCCAAAGAGC---AAAAAGATCTCTGGCACGCTGTTC 16623623
Query 63329 CTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTC 63388
|| ||| || ||||||| || | ||| | ||| | | || || ||||||| || ||
Sbjct 16623622 TTCCTTTTCTATATTCTTCTTTAAATCAAAGAATTCAAAGATGTCTAAATGCCAAGGCTC 16623563
Query 63389 CAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCT-GATCTATGTATCTAGCGG 63447
|| ||| || || | ||||||| | ||||| ||| ||| |||| | |||| ||| |
Sbjct 16623562 CAGGTAAATAGCAAATGCTCCAGGACACTTGTT-CCTACCTCGATCCAGATATCAAGCTG 16623504
Query 63448 TGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGA 63507
|||| ||||| ||||||| ||| | | || || || || | ||||| || | | |
Sbjct 16623503 TGTTGTTATATACTCTCAGCATCAGTACAAGGCCATTGGAATTGCCATTCGTCTCAGCAA 16623444
Query 63508 TATAGCCTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAG 63567
| |||| ||| | || | |||| ||| | | | ||| ||||| || | |||||
Sbjct 16623443 TGTAGCTGCCAGTAGCCCAAATACAACTCACAGCAACACCAATTCCTCCACCAGATTTAG 16623384
Query 63568 AGATTAATGCGCATCGTTTTAACGTGTCATAGATGCCTTCTATGCTATCATCGATCATGT 63627
| || ||||| || | |||| |||||||| |||||||| ||||| |||| ||||
Sbjct 16623383 AAATCAATGCATATTGCTTTAGAGTGTCATAAATGCCTTCAATGCTGTCATATTTCATAC 16623324
Query 63628 TAAGTAGAAAACAGCTAGACATTTGGTGACGAGTAGTTCCCGCATTAAATAAGGTAGGAG 63687
| || |||||||||||||| | ||| | | | || || || | || | || || |
Sbjct 16623323 TCAGAAGAAAACAGCTAGAAAGTTGTGGGCAGTTGGTACCAACACTGAAGAGAGTTGGTG 16623264
Query 63688 AAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGT---ACGTCTCAATAGCTGAGTCTA 63744
|||| || |||||| | | |||| ||| ||||||| || ||||| ||| || |
Sbjct 16623263 AAGCATGAGTAAACTACCTCTCAGGAAGAAGATTGTCTGCTGTTTCAATTGCTACATCAA 16623204
Query 63745 TATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACAA 63804
| || || || ||||| || | | | ||| ||||| ||| | ||| ||||| | |
Sbjct 16623203 TGTCTTCTTTGTGGATTCCAACAGATGCTCTCATCAACATATGCCGTGGTATTTCAGCCA 16623144
Query 63805 TTTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGT 63864
||| || ||||||||||| || || || | ||||||||||| || ||||
Sbjct 16623143 CTTTTCCATTGATTTTCAACAAATAAGACCACTCTAGCAACTTAAAACCAAAGTAATTGT 16623084
Query 63865 ATGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGCTTATCCTTATATTTGTTAACTA 63924
| || || ||| | || | |||| | | ||||| | | ||| |||| ||| |
Sbjct 16623083 AAGAGAAATCTTGGTCACAGATAACAGCAGAATTCAAGTGATCTTTATTGGCCAAAACAA 16623024
Query 63925 TATCCA-TGGTAATACTT-GAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATA 63982
|||||| || | |||| | | || ||||| | ||| |||| | ||| | | |
Sbjct 16623023 TATCCAGTGCT--GACTTGGCCACCATGGGAGAGTATTTGTCATTATGTGGACTTATGCA 16622966
Query 63983 GTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGA 64042
||| | | || |||||||| ||||| || | || |||||||| ||||| | || ||
Sbjct 16622965 GTTATACAGGTCTTCCATCACATCACTGAACACTTCATTTGTTTCTTTGTGCAAGTTAGA 16622906
Query 64043 TATGGCTATTCTGGCGGCTAGAATGGCATA 64072
| || | || || || || || |||||
Sbjct 16622905 GACAGCAGTCCTAGCTGCCAGGATAGCATA 16622876
>seq145
Length=5090371
Score = 224 bits (248), Expect = 1e-53
Identities = 215/274 (78%), Gaps = 1/274 (0%)
Strand=Plus/Minus
Query 188378 GGATCTATAGGCTTGATTTTCGCATTGACTTTACACAGACATAAACATCCCCTGAATCTG 188437
|||||| | || |||||||| |||||||||||| |||||||||| ||||||| || |||
Sbjct 1307751 GGATCTCTGGGTTTGATTTTTGCATTGACTTTAAACAGACATAAGTATCCCCTTAACCTG 1307692
Query 188438 TACCTACTTTGTGGATTTACACTGTTAGAATCTCTAACGCTGGCCTCTGTTGTTACTTTC 188497
||||| |||| |||||||||||||| ||| |||| || |||| |||||||||||||
Sbjct 1307691 TACCTGCTTTTTGGATTTACACTGTC-GAAGCTCTGACTGTGGCAGTTGTTGTTACTTTC 1307633
Query 188498 TATGATGCGCGTATCGTTATACAAGCTTTCATGTTGACTACTGCAGTGTTTCTTGCTCTG 188557
||||||| |||| || | ||||||| |||| |||||||||||| || || | ||
Sbjct 1307632 TATGATGTATGTATTATTCTGCAAGCTTCCATGCTGACTACTGCAGGAATTTTTAGTTTG 1307573
Query 188558 ACTACATGTACTCTACAATCAAAGAGAGATTTCAGTAAACTTGTAACAGGATTGTTTGCT 188617
||| | |||||||||||| ||||| |||||||| ||| ||| | |||| ||||||||
Sbjct 1307572 ACTGTGTATACTCTACAATCTAAGAGGGATTTCAGCAAATTTGGAGCAGGGCTGTTTGCT 1307513
Query 188618 GCTTTCTGGATTTTAATTTTGTCAGGAGTCTTGA 188651
||| | |||||| | |||||| ||||||
Sbjct 1307512 CTTTTGTAGATTTTGTGCCTATCAGGATTCTTGA 1307479
>seq867
Length=266704
Score = 150 bits (166), Expect = 2e-31
Identities = 263/382 (69%), Gaps = 3/382 (1%)
Strand=Plus/Minus
Query 33235 TTTAAAAGTCAACATCTAAAGAAAAATGATTGTCTTCTTGA---GACATAACTCCCATTT 33291
|||| |||||| |||| || | ||||| ||| ||| | || ||||| ||||||||
Sbjct 180931 TTTAGAAGTCAGCATCCAAGGTAAAATAATTCTCTGTTGGACTTGACATCACTCCCATCC 180872
Query 33292 TTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTTT 33351
| || || ||||| || | ||||| || || ||||| |||||||||| ||| ||||| |
Sbjct 180871 TCTGATACTCACCTACTCTCTTTTCAAAGAAGTTAGTCTTTCCTTCCAGTGAAATATTCT 180812
Query 33352 CCATGAAATCAAACGGATTGGTAACATTGTAAAtttttttAAATCCCAATTCAGAAATCA 33411
|||| || ||||| ||||| || || ||| || |||| ||| |||| || |
Sbjct 180811 CCATAAAGTCAAATGGATTCTCTACTCTGAAAACCTTGCTAAAACCCGATTCCAGCATAA 180752
Query 33412 ATCTATCTGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATGAGTT 33471
||||||||| || || || || ||| ||||| | ||||||||||| ||||| |
Sbjct 180751 GTCTATCTGCCACAAACTCAATGTATTGCTTCATTAGAGTGCAATTCATTCCGATGAGCT 180692
Query 33472 TAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATGGATACCGCATTTGTTATAATAA 33531
| || || ||| |||| || || || ||||| || || ||||| | || ||
Sbjct 180691 TCACAGGCGAGGCCTCAGTGAGGAACTCCTGTTCTATCCGAACAGCATTGATAATTATTT 180632
Query 33532 ATCTAACGGTTTCTTCACTCGGTGGATGTAATAAATGTTTAAACATCAAACATGCGAAAT 33591
||| || | || || ||| |||| || |||||| |||| || || | ||||
Sbjct 180631 CTCTTACTCTCTCCTCTGATGGTTTGTGTACTAGATGTTTGAACAACAGGCAAACAAAAT 180572
Query 33592 CGCAGTGCAGACCCTCGTCTCT 33613
| ||||| | |||| |||||
Sbjct 180571 CACAGTGTAAACCCGATTCTCT 180550
>seq2
Length=18007423
Score = 123 bits (136), Expect = 3e-23
Identities = 100/121 (83%), Gaps = 0/121 (0%)
Strand=Plus/Minus
Query 33604 CCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 33663
|||| ||||| ||||| | ||| |||||||| ||||| || ||||| || || || || |
Sbjct 1941489 CCTCATCTCTGCTAATAAGTTCATTAGAAAATGTGAGGCCAGGCATCAGTCCTCGTTTCT 1941430
Query 33664 TAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTCCTTCTACTGCAGCAAAGG 33723
| ||||| |||||||| || || || || ||||||||||| |||||||||||||||||||
Sbjct 1941429 TGAGCCAGAATATGGATGCAAAAGAACCAGAAAAGAAGATGCCTTCTACTGCAGCAAAGG 1941370
Query 33724 C 33724
|
Sbjct 1941369 C 1941369
Score = 95.1 bits (104), Expect = 2e-14
Identities = 93/120 (78%), Gaps = 0/120 (0%)
Strand=Plus/Minus
Query 33842 ATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGC 33901
|||||| | ||||| || || | |||||||||||||| ||||| |||||||| |||||
Sbjct 1939021 ATCTTTTATGTAAGTGTCAATAAGGAGACTATACATTTCAGAATGTATGTTTTCCATGGC 1938962
Query 33902 CATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTCTGTACAAAATCGTTC 33961
|| || || || |||||||| | || || |||||||| |||||| | |||||| ||
Sbjct 1938961 AATTTGGAAACCATAGAAACAGCGGGCTTCTGTAATCTGAACTTCTTGGCTAAATCGCTC 1938902
>seq80
Length=8459403
Score = 111 bits (122), Expect = 2e-19
Identities = 127/171 (74%), Gaps = 0/171 (0%)
Strand=Plus/Plus
Query 62113 TCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATAT 62172
|||| ||||| || |||||||| || |||||| ||| | || || || || ||||| |
Sbjct 1275313 TCCAGCCGTAGAAGTGCATACTAGTGAGTTTGCCATAGTTAGGCTCAGCAATGTGGATGT 1275372
Query 62173 TCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCT 62232
||| ||| || |||||||| ||||| || || || || |||||||| || | | || |
Sbjct 1275373 TCAAAGACTGGCTTTGATCAATGAAAGCACCTCTCTCAGCAGCCATCTTGAGAACAGTTT 1275432
Query 62233 TTTGTGCAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAA 62283
| || | |||||||| | ||||||||||| | |||| | || || ||||
Sbjct 1275433 TCTGAGAGATTTCCCACACAGTTTTATAAAGTTGCTTCAGGTCATCAGGAA 1275483
Score = 109 bits (120), Expect = 7e-19
Identities = 107/138 (78%), Gaps = 0/138 (0%)
Strand=Plus/Plus
Query 63263 CTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTTGTTCT 63322
|| |||||||||||| |||||||| |||||||||||||| | ||| |||||||| | |
Sbjct 1289062 CTCCACTCGTTTCATGAAGAGATCCGGAATCCAAAGAGCAAAAAAAAGATCTCTGGCACG 1289121
Query 63323 ATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCA 63382
||||| || |||||||| ||||| || | ||| ||||| | | || || |||||||
Sbjct 1289122 CTGTTCTTCCTTTCCTGTGTTCTTCTTTAAATCCAGGAATTCAAAGATGTCTAAATGCCA 1289181
Query 63383 CGGTTCCAAGTATATGGC 63400
|| |||| ||| || ||
Sbjct 1289182 AGGCTCCAGGTAAATAGC 1289199
Score = 104 bits (114), Expect = 3e-17
Identities = 105/137 (77%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 62388 ACTTGGAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACC 62447
|| || |||||||| ||||| ||||| ||||| || || || ||||| || ||||| |
Sbjct 1278101 ACCTGAAATTCTCCTGACAAGACTCTGCGAGTATAGATGTTGCTGGTGTAAGGTTCAATA 1278160
Query 62448 GACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAA 62507
||||||||||| |||| || |||||||| || || || ||||| || || | | ||||
Sbjct 1278161 GACTCATTATTCCCCAGGATCTGAGCAGTGGAAGCTGTAGGCATCGGGGCAATAAGTAAA 1278220
Query 62508 CTATTTCTAAGACCGTA 62524
|| ||||| | ||| ||
Sbjct 1278221 CTGTTTCTTATACCATA 1278237
Score = 104 bits (114), Expect = 3e-17
Identities = 137/190 (72%), Gaps = 0/190 (0%)
Strand=Plus/Plus
Query 62626 CATATGTATCATATGGTCCTTCCTTCTCAGCTAGTTTACAACTCGCCTCTAATGCACCGT 62685
|||| || ||||||||||| | || || ||| || | ||| || || || || || ||||
Sbjct 1283222 CATAGGTTTCATATGGTCCATGCTCCTTAGCAAGGTCACAGCTGGCTTCCAAGGCTCCGT 1283281
Query 62686 AATAAATGGTTTCAAAGATCTTCTTATTTAGATCTTGTGCTTCCGGGCTATCAAATGGAT 62745
||||||| ||||||||||||| |||||| | || ||||| | || ||||| || |
Sbjct 1283282 AATAAATAGTTTCAAAGATCTGCTTATTCAATAGCTGGGCTTCTGCACTCTCAAAAGGGT 1283341
Query 62746 AATTTAAGAGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTC 62805
| | | || ||||| || || || | ||||| || ||||| || || || | ||| |
Sbjct 1283342 ATCTCATCAGGATAAAAGCATCTGCCAGACCTTGTACCCCAATTCCAATGGGGCGATGAC 1283401
Query 62806 TCTTATTAGA 62815
||||| ||
Sbjct 1283402 GTTTATTTGA 1283411
Score = 82.4 bits (90), Expect = 1e-10
Identities = 101/138 (73%), Gaps = 0/138 (0%)
Strand=Plus/Plus
Query 63507 ATATAGCCTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTA 63566
|| |||| ||| | || |||||| ||| | | | ||| ||||| || || |||
Sbjct 1292661 ATGTAGCTGCCAGTAGCCCGAATACAACTCACAGCAACACCAATTCCTCCAGCAGACTTA 1292720
Query 63567 GAGATTAATGCGCATCGTTTTAACGTGTCATAGATGCCTTCTATGCTATCATCGATCATG 63626
|| || ||||| ||| | |||| |||||||| |||||||| ||||| ||||| ||||
Sbjct 1292721 GAAATCAATGCACATTGCTTTAGAGTGTCATAAATGCCTTCAATGCTGTCATCTTTCATA 1292780
Query 63627 TTAAGTAGAAAACAGCTA 63644
| || ||||||||||||
Sbjct 1292781 CTCAGAAGAAAACAGCTA 1292798
>seq57
Length=8566406
Score = 102 bits (112), Expect = 1e-16
Identities = 94/119 (79%), Gaps = 0/119 (0%)
Strand=Plus/Plus
Query 33606 TCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTA 33665
|| ||||| || || | ||| || |||||||||||||| ||||| || || | ||| ||
Sbjct 1418657 TCATCTCTGCTGATGAGTTCATTGGAAAACGTGAGTCCTGGCATAAGACCTCTCTTCTTT 1418716
Query 33666 AGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTCCTTCTACTGCAGCAAAGGC 33724
||||| ||||| | ||| || ||||| || ||||| | ||||||||| ||||| |||||
Sbjct 1418717 AGCCAGAATATAGCAGCAAAAGATCCTGAGAAGAAAACTCCTTCTACAGCAGCGAAGGC 1418775
>seq563
Length=1187434
Score = 89.7 bits (98), Expect = 6e-13
Identities = 91/119 (76%), Gaps = 0/119 (0%)
Strand=Plus/Minus
Query 188489 GTTACTTTCTATGATGCGCGTATCGTTATACAAGCTTTCATGTTGACTACTGCAGTGTTT 188548
|||||||||||||| | | ||| || | ||||||| ||| ||||||||| ||| |||
Sbjct 793541 GTTACTTTCTATGACGTACATATTATTCTGCAAGCTTACATACTGACTACTGGAGTATTT 793482
Query 188549 CTTGCTCTGACTACATGTACTCTACAATCAAAGAGAGATTTCAGTAAACTTGTAACAGG 188607
||| | |||||| | |||||| ||| | ||||| |||||||| ||| | | | ||||
Sbjct 793481 TTTGGTTTGACTATGTATACTCTGCAAGCTAAGAGGGATTTCAGCAAATTAGGAGCAGG 793423
Score = 86.0 bits (94), Expect = 8e-12
Identities = 61/70 (87%), Gaps = 0/70 (0%)
Strand=Plus/Minus
Query 188172 TGCTCCTCCATCGAGGACGACTTCAACTATGACAGCTCGGTGGCGTCTGCCAGCGTGCAC 188231
|||||||| |||||||| ||||||||||||| |||| ||||| || ||||||||||||
Sbjct 816147 TGCTCCTCAATCGAGGATGACTTCAACTATGGCAGCAGCGTGGCCTCCGCCAGCGTGCAC 816088
Query 188232 ATACGAATGG 188241
|| |||||||
Sbjct 816087 ATCCGAATGG 816078
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629761262815680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |