Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cebus_20capucinus_20imitator_20[refseq_20GCF_5F001604975.1_202016-
04-04] 7,156 sequences; 2,717,703,182 total letters
Query= NC_003391.1
Length=205719
Score E
Sequences producing significant alignments: (Bits) Value
seq145 369 5e-97
seq526 347 2e-90
seq630 311 1e-79
seq28 246 4e-60
seq563 170 3e-37
seq867 120 4e-22
seq2 120 4e-22
seq80 113 6e-20
seq57 107 3e-18
>seq145
Length=5090371
Score = 369 bits (408), Expect = 5e-97
Identities = 372/481 (77%), Gaps = 2/481 (0%)
Strand=Plus/Plus
Query 9227 TTATTTCTTATTAGATACTTCCAAAAGCTGTAACAGATGCAAGAACAGATTGATGATATC 9286
||| || ||||| | |||||| || | |||||| | || ||| ||||||||||||||
Sbjct 1307271 TTACTTTTTATTTACTGCTTCCAGAAACC-TAACAGGTACAGGAATAGATTGATGATATC 1307329
Query 9287 CAAGTAGAAATTGATAGAGGCTAACACATAGTCTTCAGGCGAGAGCTTATGTATTAGTGA 9346
|||||||| |||| | ||||| | || ||||||||||| || ||||| | |||||
Sbjct 1307330 CAAGTAGAGGCTGATGGCAGCTAATAGGTACTCTTCAGGCGACAGTTTATGCCTCAGTGA 1307389
Query 9347 GTGCGTGTCATAGATAATGAATCCGCAGAATACAAGGGCCCCAAAAGCAGACAGGACCAG 9406
| ||||||||||| |||||||| || || | |||||| | ||||| | |||||
Sbjct 1307390 ATATGTGTCATAGATGATGAATCCACAAAAAAGAAGGGCTTCTGCAGCAGCTAAGACCAA 1307449
Query 9407 CTCCACTGTTTCACTTTGCACAAATATCCTCAAAAGTCCTGACAAAATTAAAATCCACAA 9466
||||| ||| ||||| | | ||||| | |||| | |||||| | |||||| ||||
Sbjct 1307450 CTCCATTGTCTCACTATAAAAAAATAACTTCAAGAATCCTGATAGGCACAAAATCTACAA 1307509
Query 9467 AGTAACAAACAATCCTGCTCCAAGTTTACTGAAATCTCTCTTTGATTGTAGAGTATATGC 9526
| | |||||| |||||||||| ||| |||||||| ||||| |||||||||||||| |
Sbjct 1307510 AAGAGCAAACAGCCCTGCTCCAAATTTGCTGAAATCCCTCTTAGATTGTAGAGTATACAC 1307569
Query 9527 AGTCAGAGCAAGAAACACTGCAGTAGTCAGCATGAAAGCTTGCATAACGACATGCACATC 9586
||||| | || || ||||||||||||||||| ||||||||| || | | |||||
Sbjct 1307570 AGTCAAACTAAAAATTCCTGCAGTAGTCAGCATGGAAGCTTGCAGAATAATACATACATC 1307629
Query 9587 ATAGAAAGTAACAACAGAGGCCAGCGTTAGAGATTCCGACAGTGTAAATCCACAAAGCAG 9646
|||||||||||||||| |||| || |||| || |||||||||||||||| |||||||
Sbjct 1307630 ATAGAAAGTAACAACAACTGCCACAGTCAGAGCTT-CGACAGTGTAAATCCAAAAAGCAG 1307688
Query 9647 GTATAAATTCAGGGGATGTTTATGTCTGTGTAAAGTCAATGCGAAAATCAAGCCTATAGA 9706
||| | || ||||||| |||||||||| |||||||||||| |||||||| || | |||
Sbjct 1307689 GTACAGGTTAAGGGGATACTTATGTCTGTTTAAAGTCAATGCAAAAATCAAACCCAGAGA 1307748
Query 9707 T 9707
|
Sbjct 1307749 T 1307749
>seq526
Length=1402496
Score = 347 bits (384), Expect = 2e-90
Identities = 647/940 (69%), Gaps = 20/940 (2%)
Strand=Plus/Plus
Query 35811 TTTAAAAATCAACATCTAGAGAAAAATGATTGTCTTCTTGA---GACATAACTCCCATTT 35867
|||| |||||| || | | | |||| ||| ||| | || ||||| ||||||||
Sbjct 113332 TTTAGAAATCAGCACCCAAGGTAAAAGAATTCTCTGTTGGACTTGACATCACTCCCATCC 113391
Query 35868 TTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTTT 35927
| || || || || || | || || || || ||||| || ||||| | ||| ||||| |
Sbjct 113392 TCTGATACTCGCCTACTCTCTTCTCAAAGAAGTTAGTCTTTCCTTCCAGTGAAATATTCT 113451
Query 35928 CCATGAAATCGAATGGATTGATAACATTATAAAtttttttAAATCCCAATTCAGAAATCA 35987
|||| || || |||||||| | | ||| || |||| |||| ||| ||
Sbjct 113452 CCATAAAGTCAAATGGATTCTCTATTCTGAAAACCTTGCTAAAACCCAGTTCCAGCATG- 113510
Query 35988 ATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTT 36047
||| ||||| ||||| || || ||| ||||| | |||||||| || || || |
Sbjct 113511 -TCTGTCTGCCACAAACTCAATGTATTGCTTCATTAGAGTGCAATTCATCCCAATGAGCT 113569
Query 36048 TAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTA-TAATA 36106
|| || | ||| |||||||||| |||||||| || || || | || || | ||
Sbjct 113570 CCACAGGCAAGGCCTCAGTAAGAAACTCTTGTTCTATCCGAACAGCAT-TGATAGTTATT 113628
Query 36107 GATATTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACATGCGAAA 36166
| ||||| | || || ||| | | || ||||| ||||||| || || |||
Sbjct 113629 TCTCTTACTCTCTCCTCTGATGGTTTGTGTACTAGGTGTTTGAACATCAGGCAAGCAAAA 113688
Query 36167 TCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATT 36226
| |||||| |||||| ||||| |||| | || | ||||| ||||| || |||||
Sbjct 113689 TGTGAGTGTAAACCCTCATCTCTGCTAAAAAGGTCATGAGAAAATGTGAGGCCAGGCATC 113748
Query 36227 AGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCT 36286
|| || | || || ||||| |||||||| ||||| || ||||||||| | || |||||
Sbjct 113749 AGTCCTCATTTCTTGAGCCAGAATATGGATGCAAAAGAACCAGAAAAGTAGATGCCTTCC 113808
Query 36287 ACTGCCGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCACTGTCATGTATCCACTTT 36343
||||| |||||||| | || | || ||||| | | | |||| |||||
Sbjct 113809 ACTGCAGCAAAGGCTACAACGCGTTCACCATAGGTAGCCTCTTTGTCCCCAATCCAGCGC 113868
Query 36344 TGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGATAG 36403
|||||||| |||||||| || ||||||||||| || || || ||||| |||||| |
Sbjct 113869 AAGGCCCAATCTGCCTTCTTGTTGACACAAGGCATCGTTTCAATGGCATTGAAGAGAAAT 113928
Query 36404 tttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGA 36463
| ||||||| |||||| | || || || || | |||| ||||||||| |||||
Sbjct 113929 TCCCTTTCATTGGGATCTTTTATGTAAGTGTCGATAAGGAGACCATACATTTCAGAATGT 113988
Query 36464 ATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCC-TCGGTAATCTGTACTTC 36522
|||||||| ||||| ||||| || || |||||||| | |||| || |||||||| | |||
Sbjct 113989 ATGTTTTCCATGGCAATTTGGAAGCCATAGAAACAGC-AGCCTTCTGTAATCTGAAGTTC 114047
Query 36523 TGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGC 36582
| | |||||| || | || |||||||| ||||| || ||||| ||||||| || ||
Sbjct 114048 TTGGCTAAATCGCTCCACCAAGTTTTCATTTACTATGCCATCACTTGCTGCAAGGAAAGC 114107
Query 36583 CAATACATGTTTTATAAAATATTTTTCGTTTGGTGTTAGTTTATTCCAATCATTG----A 36638
|| || || |||||| ||| | || | || | || ||||| || || |
Sbjct 114108 CAGAACGTGAGATATAAAGTATCTCTCCTCAGGCTTCAG-GGATTCC---CAGTGCCGTA 114163
Query 36639 TATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACA 36698
| || || || | || || || || | |||| || || || || ||||| |||| ||
Sbjct 114164 TGTCCTTGGACAGGTCTACCTCCTCAGCGCTCCAGAAGGAGGCGTCCGCCTTCTTATGCA 114223
Query 36699 TATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAA 36738
| | |||||||| || || | || || ||||| |||||
Sbjct 114224 TCTGCCAGATGTTGTGGTACTCGATGGGGAAAATGACAAA 114263
>seq630
Length=879232
Score = 311 bits (344), Expect = 1e-79
Identities = 516/738 (70%), Gaps = 24/738 (3%)
Strand=Plus/Plus
Query 35852 GACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCT 35911
|||| |||||||| | | | ||||| || | || || || || ||| | || |||
Sbjct 417522 GACACCACTCCCATCCTCTAATGCTCACCTACTCTCTTCTCAAAGAAGTTAATCTTTCCT 417581
Query 35912 TCTAATGATATATTTTCCATGAAATCGAATGGATTGATAACATTATAAAtttttttAAAT 35971
|| | || ||||| ||||| || || |||||||| || | ||| || ||||
Sbjct 417582 TCCAGTGGAATATTCTCCATAAAGTCAAATGGATTCTCTACTCTGAAAACCTTGCTAAAA 417641
Query 35972 CCCAATTCAGAAATCAATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAA 36031
|||| ||| || | ||| ||||| ||||| || || ||| ||||| | |||
Sbjct 417642 CCCAGTTCCAGCATAAGTCTGTCTGCCACAAACTCAATGTATTGCTTCATTAGAGTGCAA 417701
Query 36032 TTCATTCCTATAAGTTTAACTGG-AAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGAC 36090
||||| || || || || || || |||| | |||| || || || ||||| || ||
Sbjct 417702 TTCATCCCAATGAGCTTCACAGGCAAGATCT-CAGTGAGGAACTCCTGTTCTATCCGAAC 417760
Query 36091 CGCGTCTGTTATAATAGATATTACTGTTTCTTCA--CTCGG-TGGATAC---AATAAATG 36144
|| | | ||||| |||| || ||||| | ||| | ||| | | || ||
Sbjct 417761 AGCAT---TGATAAT---TATTTCTCTTTCTCCCGGCTCTGATGGTTTGTGTACTAGGTG 417814
Query 36145 TTTAAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTT 36204
|| ||||||| || || ||||| ||||||| |||||| ||||| |||| | ||| ||
Sbjct 417815 TTGGAACATCAGGCAAGCAAAATCACAGTGTAAACCCTCATCTCTGCTAAAAAGTTCATT 417874
Query 36205 GGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGA 36264
||||| ||||| || ||||| || || || || |||||||| |||||||| || || ||
Sbjct 417875 AGAAAATGTGAGGCCAGGCATCAGTCCTCGTTTCTTAAGCCAGAATATGGAAGCTAAAGA 417934
Query 36265 TCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATA---ACC 36321
||||||||||| | ||||| ||||| ||||||||| | || ||||| | |
Sbjct 417935 ACCAGAAAAGAAGACGCCTTCCACTGCAGCAAAGGCAGT-------TCACCATAGGTAGC 417987
Query 36322 GGCACTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGT 36381
| |||| ||||| |||| || |||||||| || ||||||||||| ||
Sbjct 417988 CTCTTTGTCCCCAATCCAGCGCAAGGCCCGGTCTGCCTTCTTCTTGACACAAGGCATCGT 418047
Query 36382 CTCTATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAA 36441
|| || ||||| |||||| | | |||| | |||||| | ||| || ||| | |
Sbjct 418048 TTCAATGGCATTGAAGAGAAATTCCCTTTCGCTGGGATCTTTTATATACGTGTCAGTAAG 418107
Query 36442 AAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCT 36501
|||||||||||||| ||||| ||||| || ||| | ||||| ||||| |||||||| |
Sbjct 418108 GAGACTATACATTTCAGAATGTATGTTGTCCATGCCAATTTGGAATCCATAGAAACAGCG 418167
Query 36502 AGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCC 36561
||||| |||||||| |||||| | |||||| || | || |||||||| ||||| ||
Sbjct 418168 GGCCTCTGTAATCTGAACTTCTTGGCTAAATCGCTCCACCAAGTTTTCATTTACTATGCC 418227
Query 36562 GTCACTGGCTGCAAAAAA 36579
|||||| |||||||| ||
Sbjct 418228 GTCACTTGCTGCAAAGAA 418245
>seq28
Length=17023488
Score = 246 bits (272), Expect = 4e-60
Identities = 545/810 (67%), Gaps = 12/810 (1%)
Strand=Plus/Minus
Query 66062 TCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAAATCTCTGGTTCTATGTTC 66121
|| |||||| |||||| | | |||||||||||| ||| | |||||||| | |||||
Sbjct 16623679 TCATTTCATGAAGAGAGCTGCAATCCAAAGAGC---AAAAAGATCTCTGGCACGCTGTTC 16623623
Query 66122 CTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCATAATGCCACGGTTC 66181
|| ||| || ||||||| || | ||| | ||| | | || || ||||||| || ||
Sbjct 16623622 TTCCTTTTCTATATTCTTCTTTAAATCAAAGAATTCAAAGATGTCTAAATGCCAAGGCTC 16623563
Query 66182 CAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCT-GATCTATGTATCTAGCGG 66240
|| ||| || || | ||||||| | ||||| ||| ||| |||| | |||| ||| |
Sbjct 16623562 CAGGTAAATAGCAAATGCTCCAGGACACTTGTT-CCTACCTCGATCCAGATATCAAGCTG 16623504
Query 66241 TGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGA 66300
|||| ||||| ||||||| ||| | | || |||||||| | ||||| ||| | | |
Sbjct 16623503 TGTTGTTATATACTCTCAGCATCAGTACAAGGCCATTGGAATTGCCATTCGTCTCAGCAA 16623444
Query 66301 TATAGCTTCCACTTGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAG 66360
| ||||| ||| | || | |||| ||| | | | ||| ||||| || | |||||
Sbjct 16623443 TGTAGCTGCCAGTAGCCCAAATACAACTCACAGCAACACCAATTCCTCCACCAGATTTAG 16623384
Query 66361 AGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGT 66420
| || ||||| || | |||| || ||||| ||||| || || || |||| ||||
Sbjct 16623383 AAATCAATGCATATTGCTTTAGAGTGTCATAAATGCCTTCAATGCTGTCATATTTCATAC 16623324
Query 66421 TAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAG 66480
| || |||||||||||||| | ||| | | | || || || | || | || || |
Sbjct 16623323 TCAGAAGAAAACAGCTAGAAAGTTGTGGGCAGTTGGTACCAACACTGAAGAGAGTTGGTG 16623264
Query 66481 AAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGT---ACGTCTCAATAGCTGAGTCTA 66537
|||| || |||||| | | |||| ||| ||||||| || ||||| ||| || |
Sbjct 16623263 AAGCATGAGTAAACTACCTCTCAGGAAGAAGATTGTCTGCTGTTTCAATTGCTACATCAA 16623204
Query 66538 TATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGA 66597
| || || || ||||| || | | | ||| ||||| ||| | ||| ||||| | |
Sbjct 16623203 TGTCTTCTTTGTGGATTCCAACAGATGCTCTCATCAACATATGCCGTGGTATTTCAGCCA 16623144
Query 66598 TCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGT 66657
|| || ||||||||||| || || || | ||||||||||| || ||||
Sbjct 16623143 CTTTTCCATTGATTTTCAACAAATAAGACCACTCTAGCAACTTAAAACCAAAGTAATTGT 16623084
Query 66658 ATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTA 66717
| || || ||| | || | |||| | | || || | | ||| |||| ||| |
Sbjct 16623083 AAGAGAAATCTTGGTCACAGATAACAGCAGAATTCAAGTGATCTTTATTGGCCAAAACAA 16623024
Query 66718 CATCCA-TGGTAATACTT-GAAATAATCGGAGAATGTTTCCCATTTTTAGGATTGACATA 66775
||||| || | |||| | | || ||||| | ||| |||| | ||| | | |
Sbjct 16623023 TATCCAGTGCT--GACTTGGCCACCATGGGAGAGTATTTGTCATTATGTGGACTTATGCA 16622966
Query 66776 GTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGA 66835
||| | | || |||||||| ||||| || | || |||||||||||||| | || ||
Sbjct 16622965 GTTATACAGGTCTTCCATCACATCACTGAACACTTCATTTGTTTCTTTGTGCAAGTTAGA 16622906
Query 66836 TACGGCTATTCTAGCGGCTATAATGGCATA 66865
|| || | ||||| || | || |||||
Sbjct 16622905 GACAGCAGTCCTAGCTGCCAGGATAGCATA 16622876
>seq563
Length=1187434
Score = 170 bits (188), Expect = 3e-37
Identities = 151/189 (80%), Gaps = 0/189 (0%)
Strand=Plus/Plus
Query 9244 CTTCCAAAAGCTGTAACAGATGCAAGAACAGATTGATGATATCCAAGTAGAAATTGATAG 9303
|||||| || ||||||| |||| ||| |||||||||||||||||||||| ||||||
Sbjct 785351 CTTCCAGAAATCGTAACAGGTGCAGGAATAGATTGATGATATCCAAGTAGAGGCTGATAG 785410
Query 9304 AGGCTAACACATAGTCTTCAGGCGAGAGCTTATGTATTAGTGAGTGCGTGTCATAGATAA 9363
||||| | || |||||||| || || ||||| || |||||||| |||||||||||||
Sbjct 785411 CAGCTAATATGTATTCTTCAGGTGACAGTTTATGCATCAGTGAGTGTGTGTCATAGATAA 785470
Query 9364 TGAATCCGCAGAATACAAGGGCCCCAAAAGCAGACAGGACCAGCTCCACTGTTTCACTTT 9423
||||||| ||||| | |||||| || ||||| | ||||| ||||||||| ||||| |
Sbjct 785471 TGAATCCACAGAAAAGAAGGGCTCCTGCAGCAGCTAAGACCAACTCCACTGTCTCACTAT 785530
Query 9424 GCACAAATA 9432
| |||||
Sbjct 785531 AAAAAAATA 785539
Score = 111 bits (122), Expect = 2e-19
Identities = 96/119 (81%), Gaps = 0/119 (0%)
Strand=Plus/Plus
Query 9480 CCTGCTCCAAGTTTACTGAAATCTCTCTTTGATTGTAGAGTATATGCAGTCAGAGCAAGA 9539
|||||||| | ||| |||||||| ||||| | ||| |||||||| ||||| | ||| |
Sbjct 793423 CCTGCTCCTAATTTGCTGAAATCCCTCTTAGCTTGCAGAGTATACATAGTCAAACCAAAA 793482
Query 9540 AACACTGCAGTAGTCAGCATGAAAGCTTGCATAACGACATGCACATCATAGAAAGTAAC 9598
|| ||| |||||||||| ||| ||||||||| || | ||| || ||||||||||||||
Sbjct 793483 AATACTCCAGTAGTCAGTATGTAAGCTTGCAGAATAATATGTACGTCATAGAAAGTAAC 793541
Score = 107 bits (118), Expect = 3e-18
Identities = 87/103 (84%), Gaps = 3/103 (3%)
Strand=Plus/Plus
Query 9847 CCATTCGTATGTGCACACTGGCAGACGCCACCGAGCTGCCATAGTTGAAGTCGTCCTCGA 9906
||||||| |||||||| ||||| || ||||| |||||||||||||||||| |||||||
Sbjct 816078 CCATTCGGATGTGCACGCTGGCGGAGGCCACGCTGCTGCCATAGTTGAAGTCATCCTCGA 816137
Query 9907 TGGAGGAGCACGCGTA--GAGGCTCGGCAT-GGCCATGGCGGC 9946
| |||||||| | ||| | || ||||||| ||||||||||||
Sbjct 816138 TTGAGGAGCAAGGGTACCGGGGATCGGCATCGGCCATGGCGGC 816180
>seq867
Length=266704
Score = 120 bits (132), Expect = 4e-22
Identities = 256/382 (67%), Gaps = 3/382 (1%)
Strand=Plus/Minus
Query 35811 TTTAAAAATCAACATCTAGAGAAAAATGATTGTCTTCTTGA---GACATAACTCCCATTT 35867
|||| || ||| |||| | | ||||| ||| ||| | || ||||| ||||||||
Sbjct 180931 TTTAGAAGTCAGCATCCAAGGTAAAATAATTCTCTGTTGGACTTGACATCACTCCCATCC 180872
Query 35868 TTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTTT 35927
| || || ||||| || | ||||| || || ||||| || ||||| | ||| ||||| |
Sbjct 180871 TCTGATACTCACCTACTCTCTTTTCAAAGAAGTTAGTCTTTCCTTCCAGTGAAATATTCT 180812
Query 35928 CCATGAAATCGAATGGATTGATAACATTATAAAtttttttAAATCCCAATTCAGAAATCA 35987
|||| || || |||||||| || | ||| || |||| ||| |||| || |
Sbjct 180811 CCATAAAGTCAAATGGATTCTCTACTCTGAAAACCTTGCTAAAACCCGATTCCAGCATAA 180752
Query 35988 ATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTT 36047
||||||||| ||||| || || ||| ||||| | ||||||||||| || || |
Sbjct 180751 GTCTATCTGCCACAAACTCAATGTATTGCTTCATTAGAGTGCAATTCATTCCGATGAGCT 180692
Query 36048 TAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAATAG 36107
| || || ||| |||| || || || ||||| || || || | | || ||
Sbjct 180691 TCACAGGCGAGGCCTCAGTGAGGAACTCCTGTTCTATCCGAACAGCATTGATAATTATTT 180632
Query 36108 ATATTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACATGCGAAAT 36167
| ||||| | || || ||| | | || |||||| |||| || || | ||||
Sbjct 180631 CTCTTACTCTCTCCTCTGATGGTTTGTGTACTAGATGTTTGAACAACAGGCAAACAAAAT 180572
Query 36168 CGCAGTGTAGACCCTCGTCTCT 36189
| ||||||| |||| |||||
Sbjct 180571 CACAGTGTAAACCCGATTCTCT 180550
>seq2
Length=18007423
Score = 120 bits (132), Expect = 4e-22
Identities = 99/121 (82%), Gaps = 0/121 (0%)
Strand=Plus/Minus
Query 36180 CCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 36239
|||| ||||| ||||| | ||| || ||||| ||||| || ||||| || || || || |
Sbjct 1941489 CCTCATCTCTGCTAATAAGTTCATTAGAAAATGTGAGGCCAGGCATCAGTCCTCGTTTCT 1941430
Query 36240 TAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGG 36299
| ||||| |||||||| ||||| || ||||||||||| || ||||||||||| |||||||
Sbjct 1941429 TGAGCCAGAATATGGATGCAAAAGAACCAGAAAAGAAGATGCCTTCTACTGCAGCAAAGG 1941370
Query 36300 C 36300
|
Sbjct 1941369 C 1941369
Score = 100 bits (110), Expect = 4e-16
Identities = 94/120 (78%), Gaps = 0/120 (0%)
Strand=Plus/Minus
Query 36418 ATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGC 36477
|||||| | || || ||||| | |||||||||||||| ||||| |||||||| |||||
Sbjct 1939021 ATCTTTTATGTAAGTGTCAATAAGGAGACTATACATTTCAGAATGTATGTTTTCCATGGC 1938962
Query 36478 CATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTC 36537
||||| || || |||||||| | || || |||||||| |||||| | |||||| ||
Sbjct 1938961 AATTTGGAAACCATAGAAACAGCGGGCTTCTGTAATCTGAACTTCTTGGCTAAATCGCTC 1938902
>seq80
Length=8459403
Score = 113 bits (124), Expect = 6e-20
Identities = 107/137 (78%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 65181 ACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACA 65240
|| ||||||||||| ||||| ||||| ||||| || || || ||||| || ||||| | |
Sbjct 1278101 ACCTGAAATTCTCCTGACAAGACTCTGCGAGTATAGATGTTGCTGGTGTAAGGTTCAATA 1278160
Query 65241 GACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAA 65300
||||||||||| |||| || |||||||| || || || ||||| || || | | ||||
Sbjct 1278161 GACTCATTATTCCCCAGGATCTGAGCAGTGGAAGCTGTAGGCATCGGGGCAATAAGTAAA 1278220
Query 65301 CTATTTCTAAGACCGTA 65317
|| ||||| | ||| ||
Sbjct 1278221 CTGTTTCTTATACCATA 1278237
Score = 111 bits (122), Expect = 2e-19
Identities = 127/171 (74%), Gaps = 0/171 (0%)
Strand=Plus/Plus
Query 64906 TCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATAT 64965
|||| ||||| || |||||||| || |||||| ||| | || || || || ||||| |
Sbjct 1275313 TCCAGCCGTAGAAGTGCATACTAGTGAGTTTGCCATAGTTAGGCTCAGCAATGTGGATGT 1275372
Query 64966 TCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCT 65025
||| ||| || |||||||| ||||| || || || || |||||||| || | | || |
Sbjct 1275373 TCAAAGACTGGCTTTGATCAATGAAAGCACCTCTCTCAGCAGCCATCTTGAGAACAGTTT 1275432
Query 65026 TTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAA 65076
| || | |||||||| | ||||||||||| | |||| | || || ||||
Sbjct 1275433 TCTGAGAGATTTCCCACACAGTTTTATAAAGTTGCTTCAGGTCATCAGGAA 1275483
Score = 109 bits (120), Expect = 7e-19
Identities = 107/138 (78%), Gaps = 0/138 (0%)
Strand=Plus/Plus
Query 66056 CTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAAATCTCTGGTTCT 66115
|| |||||||||||| |||||||| |||||||||||||| | ||| | |||||||| |
Sbjct 1289062 CTCCACTCGTTTCATGAAGAGATCCGGAATCCAAAGAGCAAAAAAAAGATCTCTGGCACG 1289121
Query 66116 ATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCATAATGCCA 66175
||||| || |||||||| ||||| || | ||| ||||| | | || || |||||||
Sbjct 1289122 CTGTTCTTCCTTTCCTGTGTTCTTCTTTAAATCCAGGAATTCAAAGATGTCTAAATGCCA 1289181
Query 66176 CGGTTCCAAGTATATGGC 66193
|| |||| ||| || ||
Sbjct 1289182 AGGCTCCAGGTAAATAGC 1289199
Score = 102 bits (112), Expect = 1e-16
Identities = 122/166 (73%), Gaps = 0/166 (0%)
Strand=Plus/Plus
Query 66799 CACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTATAA 66858
|||| || | ||| |||||||||||||| | || || ||||| || || || || | |
Sbjct 1304487 CACTGAACACTTTCTTTGTTTCTTTGTGCAAGTTAGAGACGGCAATCCTGGCTGCCAGGA 1304546
Query 66859 TGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCA 66918
| ||||| || ||||| | ||||| | || || ||| |||| || |||| ||| || |
Sbjct 1304547 TAGCATAGTCAGGATGCTTAGTAGTCAAGGTTGCAGCTGTTTCAGCAGCCAAAGTATCTA 1304606
Query 66919 ATTCTACCGTTGTTACTCCATTATATATTCCTTGGATAACCTTCAT 66964
||| ||||| || || ||| | || | |||||||| ||||||||
Sbjct 1304607 GTTCCACCGTGGTGACCCCACTGTACAAGCCTTGGATTACCTTCAT 1304652
Score = 100 bits (110), Expect = 4e-16
Identities = 136/190 (72%), Gaps = 0/190 (0%)
Strand=Plus/Plus
Query 65419 CATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGT 65478
|||| || || |||||||| | || || ||| || ||||| || || || || || ||||
Sbjct 1283222 CATAGGTTTCATATGGTCCATGCTCCTTAGCAAGGTCACAGCTGGCTTCCAAGGCTCCGT 1283281
Query 65479 AATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGAT 65538
||||||| ||||| ||||||| |||||| | || ||||| || ||||| || |
Sbjct 1283282 AATAAATAGTTTCAAAGATCTGCTTATTCAATAGCTGGGCTTCTGCACTCTCAAAAGGGT 1283341
Query 65539 AATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTC 65598
| | | || ||||| || ||||| | ||||| || ||||| || || || | ||| |
Sbjct 1283342 ATCTCATCAGGATAAAAGCATCTGCCAGACCTTGTACCCCAATTCCAATGGGGCGATGAC 1283401
Query 65599 TCTTATTAGA 65608
||||| ||
Sbjct 1283402 GTTTATTTGA 1283411
>seq57
Length=8566406
Score = 107 bits (118), Expect = 3e-18
Identities = 95/119 (80%), Gaps = 0/119 (0%)
Strand=Plus/Plus
Query 36182 TCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTA 36241
|| ||||| || || | ||| ||||||||||||||||| ||||| || || | ||| ||
Sbjct 1418657 TCATCTCTGCTGATGAGTTCATTGGAAAACGTGAGTCCTGGCATAAGACCTCTCTTCTTT 1418716
Query 36242 AGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGC 36300
||||| ||||| | ||||| ||||| || ||||||| ||||||||| || || |||||
Sbjct 1418717 AGCCAGAATATAGCAGCAAAAGATCCTGAGAAGAAAACTCCTTCTACAGCAGCGAAGGC 1418775
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 658113926443040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |