Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cebus_20capucinus_20imitator_20[refseq_20GCF_5F001604975.1_202016- 04-04] 7,156 sequences; 2,717,703,182 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq526 389 6e-103 seq630 329 5e-85 seq28 246 4e-60 seq867 129 8e-25 seq2 129 8e-25 seq80 114 2e-20 seq57 107 3e-18 >seq526 Length=1402496 Score = 389 bits (430), Expect = 6e-103 Identities = 656/940 (70%), Gaps = 20/940 (2%) Strand=Plus/Plus Query 49613 TTTAAAAGTCAACATCTAGAGAAAAATGATTATCTTCTTGA---GACATAACTCCCATTT 49669 |||| || ||| || | | | |||| ||| ||| | || ||||| |||||||| Sbjct 113332 TTTAGAAATCAGCACCCAAGGTAAAAGAATTCTCTGTTGGACTTGACATCACTCCCATCC 113391 Query 49670 TTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTTT 49729 | || || || || || | || || || || ||||| |||||||||| ||| ||||| | Sbjct 113392 TCTGATACTCGCCTACTCTCTTCTCAAAGAAGTTAGTCTTTCCTTCCAGTGAAATATTCT 113451 Query 49730 CCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATCA 49789 |||| || ||||| ||||| | | ||| || |||| |||| ||| || Sbjct 113452 CCATAAAGTCAAATGGATTCTCTATTCTGAAAACCTTGCTAAAACCCAGTTCCAGCATG- 113510 Query 49790 ATCTATCCGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTT 49849 ||| || || ||||| || || ||| ||||| | |||||||| || || || | Sbjct 113511 -TCTGTCTGCCACAAACTCAATGTATTGCTTCATTAGAGTGCAATTCATCCCAATGAGCT 113569 Query 49850 TAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTA-TAATA 49908 || || | ||| |||||||||| |||||||| || || |||| || || | || Sbjct 113570 CCACAGGCAAGGCCTCAGTAAGAAACTCTTGTTCTATCCGAACAGCAT-TGATAGTTATT 113628 Query 49909 GATCTAACGGTTTCTTCACTCGGTGGATGCAATAAATGTTTAAACATCAAACATGCGAAA 49968 ||| || | || || ||| || | || ||||| ||||||| || || ||| Sbjct 113629 TCTCTTACTCTCTCCTCTGATGGTTTGTGTACTAGGTGTTTGAACATCAGGCAAGCAAAA 113688 Query 49969 TCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATT 50028 | |||| | |||||| ||||| |||| || || | ||||| ||||| || ||||| Sbjct 113689 TGTGAGTGTAAACCCTCATCTCTGCTAAAAAGGTCATGAGAAAATGTGAGGCCAGGCATC 113748 Query 50029 AGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTTCT 50088 || || | || || ||||| |||||||| ||||| || ||||||||| |||| ||||| Sbjct 113749 AGTCCTCATTTCTTGAGCCAGAATATGGATGCAAAAGAACCAGAAAAGTAGATGCCTTCC 113808 Query 50089 ACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCGC---TGTCATGTATCCACTTT 50145 ||||| |||||||| |||| | || ||||| | || |||| ||||| Sbjct 113809 ACTGCAGCAAAGGCTACAACGCGTTCACCATAGGTAGCCTCTTTGTCCCCAATCCAGCGC 113868 Query 50146 TGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAG 50205 |||||||| |||||||| || ||||||||||||||||| |||||||| |||||| | Sbjct 113869 AAGGCCCAATCTGCCTTCTTGTTGACACAAGGCATCGTTTCAATGGCATTGAAGAGAAAT 113928 Query 50206 tttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGA 50265 | ||||||| |||||| | ||||| ||||| | |||| ||||||||| ||||| Sbjct 113929 TCCCTTTCATTGGGATCTTTTATGTAAGTGTCGATAAGGAGACCATACATTTCAGAATGT 113988 Query 50266 ATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCC-TCGGTAATCTGCACTTC 50324 |||||||| ||||| || || || || |||||||| | |||| || |||||||| | ||| Sbjct 113989 ATGTTTTCCATGGCAATTTGGAAGCCATAGAAACAGC-AGCCTTCTGTAATCTGAAGTTC 114047 Query 50325 TGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGC 50384 | | |||||| || | || |||||||| ||||| || ||||| ||||||| || || Sbjct 114048 TTGGCTAAATCGCTCCACCAAGTTTTCATTTACTATGCCATCACTTGCTGCAAGGAAAGC 114107 Query 50385 CAATACATGTTTTATAAAATGTTTTTCGTTGGGTGTTAGTTTATTCCAATCATTG----A 50440 || || || |||||| | | | || | || | || ||||| || || | Sbjct 114108 CAGAACGTGAGATATAAAGTATCTCTCCTCAGGCTTCAG-GGATTCC---CAGTGCCGTA 114163 Query 50441 TATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACA 50500 | || || || | ||||| || || | |||| || || || || ||||| |||| || Sbjct 114164 TGTCCTTGGACAGGTCTACCTCCTCAGCGCTCCAGAAGGAGGCGTCCGCCTTCTTATGCA 114223 Query 50501 TATTCCAGATGTCATGATATTGGATTGGGAAAATAACAAA 50540 | | |||||||| || || | ||| |||||||| ||||| Sbjct 114224 TCTGCCAGATGTTGTGGTACTCGATGGGGAAAATGACAAA 114263 >seq630 Length=879232 Score = 329 bits (364), Expect = 5e-85 Identities = 623/901 (69%), Gaps = 37/901 (4%) Strand=Plus/Plus Query 49613 TTTAAAAGTCAACATCTAGAGAAAAATGA-TTATCTTCTTGA---GACATAACTCCCATT 49668 |||| |||||| |||| | ||| ||| || || ||| || |||| |||||||| Sbjct 417478 TTTAGAAGTCAGCATCCA-AGATAAAAGAATTCTCTGTGGGACTTGACACCACTCCCATC 417536 Query 49669 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTT 49728 | | | ||||| || | || || || || ||| | |||||||||| || ||||| Sbjct 417537 CTCTAATGCTCACCTACTCTCTTCTCAAAGAAGTTAATCTTTCCTTCCAGTGGAATATTC 417596 Query 49729 TCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATC 49788 ||||| || ||||| ||||| || | ||| || |||| |||| ||| || Sbjct 417597 TCCATAAAGTCAAATGGATTCTCTACTCTGAAAACCTTGCTAAAACCCAGTTCCAGCATA 417656 Query 49789 AATCTATCCGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGT 49848 | ||| || || ||||| || || ||| ||||| | |||||||| || || || Sbjct 417657 AGTCTGTCTGCCACAAACTCAATGTATTGCTTCATTAGAGTGCAATTCATCCCAATGAGC 417716 Query 49849 TTAACTGG-AAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAAT 49907 || || || |||| | |||| || || || ||||| || || |||| | ||||| Sbjct 417717 TTCACAGGCAAGATCT-CAGTGAGGAACTCCTGTTCTATCCGAACAGCAT---TGATAAT 417772 Query 49908 AGATCTAACGGTTTCTTCA--CTCGG-TGGAT---GCAATAAATGTTTAAACATCAAACA 49961 || | | ||||| | ||| | ||| | | | || |||| ||||||| || Sbjct 417773 T-ATTTCTC--TTTCTCCCGGCTCTGATGGTTTGTGTACTAGGTGTTGGAACATCAGGCA 417829 Query 49962 TGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCC 50021 || ||||| ||||| | |||||| ||||| |||| ||||| || ||||| ||||| || Sbjct 417830 AGCAAAATCACAGTGTAAACCCTCATCTCTGCTAAAAAGTTCATTAGAAAATGTGAGGCC 417889 Query 50022 GGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGAT 50081 ||||| || || || || |||||||| |||||||| || || || ||||||||||||| Sbjct 417890 AGGCATCAGTCCTCGTTTCTTAAGCCAGAATATGGAAGCTAAAGAACCAGAAAAGAAGAC 417949 Query 50082 TCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCGC---TGTCATGTAT 50138 ||||| ||||| ||||||||| || || ||||| | || |||| || Sbjct 417950 GCCTTCCACTGCAGCAAAGGCA----GT---TCACCATAGGTAGCCTCTTTGTCCCCAAT 418002 Query 50139 CCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAA 50198 ||| |||| || |||||||| || ||||||||||||||||| |||||||| || Sbjct 418003 CCAGCGCAAGGCCCGGTCTGCCTTCTTCTTGACACAAGGCATCGTTTCAATGGCATTGAA 418062 Query 50199 GAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTC 50258 |||| | | |||| | |||||| | ||| || || | | |||||||||||||| Sbjct 418063 GAGAAATTCCCTTTCGCTGGGATCTTTTATATACGTGTCAGTAAGGAGACTATACATTTC 418122 Query 50259 CGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTG 50318 ||||| ||||| || ||| | || || ||||| |||||||| | ||||| |||||||| Sbjct 418123 AGAATGTATGTTGTCCATGCCAATTTGGAATCCATAGAAACAGCGGGCCTCTGTAATCTG 418182 Query 50319 CACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAA 50378 |||||| | |||||| || | || |||||||| ||||| |||||||| |||||||| Sbjct 418183 AACTTCTTGGCTAAATCGCTCCACCAAGTTTTCATTTACTATGCCGTCACTTGCTGCAAA 418242 Query 50379 AAACGCCAATACATGTTTTATAAAATGTTTTTCGTTGGGTGTTAGTTTATTCCAATCATT 50438 || || || || |||||| ||| | || | ||| | || ||||| || | Sbjct 418243 GAAACTCAGAACGTGGGATATAAAGTGTCTCTCCTCGGGCTTCAG-GGATTCC---CAGT 418298 Query 50439 G----ATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTT 50494 | || || || || || || ||||| | |||||||| || ||||| | ||| | Sbjct 418299 GCCGAATGTCCTTGGACGGGTCCACCTCTTCGGCGGTCCAAAAGGAGGCCTCCGTCTTGT 418358 Query 50495 T 50495 | Sbjct 418359 T 418359 >seq28 Length=17023488 Score = 246 bits (272), Expect = 4e-60 Identities = 545/810 (67%), Gaps = 12/810 (1%) Strand=Plus/Minus Query 79941 TCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTC 80000 || |||||| |||||| | | |||||||||||| ||| |||||||||| | || || Sbjct 16623679 TCATTTCATGAAGAGAGCTGCAATCCAAAGAGC---AAAAAGATCTCTGGCACGCTGTTC 16623623 Query 80001 CTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTC 80060 || ||| || ||||||| || | ||| | ||| | | || || ||||||| || || Sbjct 16623622 TTCCTTTTCTATATTCTTCTTTAAATCAAAGAATTCAAAGATGTCTAAATGCCAAGGCTC 16623563 Query 80061 CAAGTATATGGCCATAACTCCCGGTCGTTTGTTTCCTCCCT-GATCTATGTATCTAGCGG 80119 || ||| || || | |||| || | ||||| ||| ||| |||| | |||| ||| | Sbjct 16623562 CAGGTAAATAGCAAATGCTCCAGGACACTTGTT-CCTACCTCGATCCAGATATCAAGCTG 16623504 Query 80120 TGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGA 80179 |||| ||||| ||||||| ||| | | || |||||||| | ||||| ||| | | | Sbjct 16623503 TGTTGTTATATACTCTCAGCATCAGTACAAGGCCATTGGAATTGCCATTCGTCTCAGCAA 16623444 Query 80180 TATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAG 80239 | ||||| ||| | || | |||| ||| | | | ||| ||||| || | ||||| Sbjct 16623443 TGTAGCTGCCAGTAGCCCAAATACAACTCACAGCAACACCAATTCCTCCACCAGATTTAG 16623384 Query 80240 AGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATGCTATCATCAATCATGT 80299 | || ||||| || | |||| || ||||| ||||| || ||||| |||| |||| Sbjct 16623383 AAATCAATGCATATTGCTTTAGAGTGTCATAAATGCCTTCAATGCTGTCATATTTCATAC 16623324 Query 80300 TAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAG 80359 | || |||||||||||||| | ||| | | | || || || | || | || || | Sbjct 16623323 TCAGAAGAAAACAGCTAGAAAGTTGTGGGCAGTTGGTACCAACACTGAAGAGAGTTGGTG 16623264 Query 80360 AAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGT---ACGTCTCAATAGCTGATTCTA 80416 |||| || |||||| | | |||| || ||||||| || ||||| ||| || | Sbjct 16623263 AAGCATGAGTAAACTACCTCTCAGGAAGAAGATTGTCTGCTGTTTCAATTGCTACATCAA 16623204 Query 80417 TATCCCATTGATGAATTCCTACCGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGA 80476 | || || || ||||| || | | | ||| ||||| ||| | ||| ||||| | | Sbjct 16623203 TGTCTTCTTTGTGGATTCCAACAGATGCTCTCATCAACATATGCCGTGGTATTTCAGCCA 16623144 Query 80477 TCTTGTTATTTATTTTCAACAAGTAAGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGT 80536 || ||| ||||||||||| ||||| || | ||||||||||| || |||| Sbjct 16623143 CTTTTCCATTGATTTTCAACAAATAAGACCACTCTAGCAACTTAAAACCAAAGTAATTGT 16623084 Query 80537 ATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTA 80596 | || || ||| | || | |||| | | || || | | ||| |||| ||| | Sbjct 16623083 AAGAGAAATCTTGGTCACAGATAACAGCAGAATTCAAGTGATCTTTATTGGCCAAAACAA 16623024 Query 80597 CATCCA-TGGTGATACTT-GAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATA 80654 ||||| || || |||| | | || ||||| | ||| |||| | ||| | | | Sbjct 16623023 TATCCAGTGCTG--ACTTGGCCACCATGGGAGAGTATTTGTCATTATGTGGACTTATGCA 16622966 Query 80655 GTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGA 80714 ||| | | || |||||||| ||||| || | || |||||||| ||||| | || || Sbjct 16622965 GTTATACAGGTCTTCCATCACATCACTGAACACTTCATTTGTTTCTTTGTGCAAGTTAGA 16622906 Query 80715 TACGGCTATTCTGGCGGCTAAAATGGCATA 80744 || || | || || || | || ||||| Sbjct 16622905 GACAGCAGTCCTAGCTGCCAGGATAGCATA 16622876 >seq867 Length=266704 Score = 129 bits (142), Expect = 8e-25 Identities = 258/382 (68%), Gaps = 3/382 (1%) Strand=Plus/Minus Query 49613 TTTAAAAGTCAACATCTAGAGAAAAATGATTATCTTCTTGA---GACATAACTCCCATTT 49669 |||| |||||| |||| | | ||||| ||| ||| | || ||||| |||||||| Sbjct 180931 TTTAGAAGTCAGCATCCAAGGTAAAATAATTCTCTGTTGGACTTGACATCACTCCCATCC 180872 Query 49670 TTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTTT 49729 | || || ||||| || | ||||| || || ||||| |||||||||| ||| ||||| | Sbjct 180871 TCTGATACTCACCTACTCTCTTTTCAAAGAAGTTAGTCTTTCCTTCCAGTGAAATATTCT 180812 Query 49730 CCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATCA 49789 |||| || ||||| ||||| || | ||| || |||| ||| |||| || | Sbjct 180811 CCATAAAGTCAAATGGATTCTCTACTCTGAAAACCTTGCTAAAACCCGATTCCAGCATAA 180752 Query 49790 ATCTATCCGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTT 49849 |||||| || ||||| || || ||| ||||| | ||||||||||| || || | Sbjct 180751 GTCTATCTGCCACAAACTCAATGTATTGCTTCATTAGAGTGCAATTCATTCCGATGAGCT 180692 Query 49850 TAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAATAG 49909 | || || ||| |||| || || || ||||| || || |||| | || || Sbjct 180691 TCACAGGCGAGGCCTCAGTGAGGAACTCCTGTTCTATCCGAACAGCATTGATAATTATTT 180632 Query 49910 ATCTAACGGTTTCTTCACTCGGTGGATGCAATAAATGTTTAAACATCAAACATGCGAAAT 49969 ||| || | || || ||| || | || |||||| |||| || || | |||| Sbjct 180631 CTCTTACTCTCTCCTCTGATGGTTTGTGTACTAGATGTTTGAACAACAGGCAAACAAAAT 180572 Query 49970 CGCAGTGCAGACCCTCGTCTCT 49991 | ||||| | |||| ||||| Sbjct 180571 CACAGTGTAAACCCGATTCTCT 180550 >seq2 Length=18007423 Score = 129 bits (142), Expect = 8e-25 Identities = 103/124 (83%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 49982 CCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 50041 |||| ||||| ||||| ||||| || ||||| ||||| || ||||| || || || || | Sbjct 1941489 CCTCATCTCTGCTAATAAGTTCATTAGAAAATGTGAGGCCAGGCATCAGTCCTCGTTTCT 1941430 Query 50042 TAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTTCTACTGCGGCAAAGG 50101 | ||||| |||||||| ||||| || |||||||||||||| ||||||||||| ||||||| Sbjct 1941429 TGAGCCAGAATATGGATGCAAAAGAACCAGAAAAGAAGATGCCTTCTACTGCAGCAAAGG 1941370 Query 50102 CAAC 50105 | || Sbjct 1941369 CTAC 1941366 Score = 95.1 bits (104), Expect = 2e-14 Identities = 93/120 (78%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 50220 ATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGC 50279 |||||| | ||||| || || | |||||||||||||| ||||| |||||||| ||||| Sbjct 1939021 ATCTTTTATGTAAGTGTCAATAAGGAGACTATACATTTCAGAATGTATGTTTTCCATGGC 1938962 Query 50280 CATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTCTGTACAAAATCGTTC 50339 || || || || |||||||| | || || |||||||| |||||| | |||||| || Sbjct 1938961 AATTTGGAAACCATAGAAACAGCGGGCTTCTGTAATCTGAACTTCTTGGCTAAATCGCTC 1938902 >seq80 Length=8459403 Score = 114 bits (126), Expect = 2e-20 Identities = 128/171 (75%), Gaps = 0/171 (0%) Strand=Plus/Plus Query 78785 TCCATCCGTAGAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATAT 78844 |||| |||||||| |||||||| || |||||| ||| | || || || || ||||| | Sbjct 1275313 TCCAGCCGTAGAAGTGCATACTAGTGAGTTTGCCATAGTTAGGCTCAGCAATGTGGATGT 1275372 Query 78845 TCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCT 78904 ||| ||| || |||||||| ||||| || || || || |||||||| || | | || | Sbjct 1275373 TCAAAGACTGGCTTTGATCAATGAAAGCACCTCTCTCAGCAGCCATCTTGAGAACAGTTT 1275432 Query 78905 TTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAA 78955 | || | |||||||| | ||||||||||| | |||| | || || |||| Sbjct 1275433 TCTGAGAGATTTCCCACACAGTTTTATAAAGTTGCTTCAGGTCATCAGGAA 1275483 Score = 107 bits (118), Expect = 3e-18 Identities = 104/134 (78%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 79939 ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGC 79998 ||||||||||| |||||||| |||||||||||||| | ||| |||||||||| | || Sbjct 1289066 ACTCGTTTCATGAAGAGATCCGGAATCCAAAGAGCAAAAAAAAGATCTCTGGCACGCTGT 1289125 Query 79999 TCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGT 80058 || || |||||||| ||||| || | ||| ||||| | | || || ||||||| || Sbjct 1289126 TCTTCCTTTCCTGTGTTCTTCTTTAAATCCAGGAATTCAAAGATGTCTAAATGCCAAGGC 1289185 Query 80059 TCCAAGTATATGGC 80072 |||| ||| || || Sbjct 1289186 TCCAGGTAAATAGC 1289199 Score = 104 bits (114), Expect = 3e-17 Identities = 105/137 (77%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 79060 ACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCACC 79119 || ||||||||||| ||||| ||||| ||||| || || || ||||| || ||||| | Sbjct 1278101 ACCTGAAATTCTCCTGACAAGACTCTGCGAGTATAGATGTTGCTGGTGTAAGGTTCAATA 1278160 Query 79120 GATTCATTATTTCCCAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAATAAA 79179 || |||||||| |||| || |||||||| || || || ||||| || || | | |||| Sbjct 1278161 GACTCATTATTCCCCAGGATCTGAGCAGTGGAAGCTGTAGGCATCGGGGCAATAAGTAAA 1278220 Query 79180 CTATTTCTAAGACCGTA 79196 || ||||| | ||| || Sbjct 1278221 CTGTTTCTTATACCATA 1278237 Score = 91.5 bits (100), Expect = 2e-13 Identities = 133/188 (71%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 79300 TATGTTTCATAAGGTCCTTCCTTTTCGGCTAATTCACAACTCGCCTCTAATGCTCCGTAA 79359 || |||||||| ||||| | || | || | ||||| || || || || ||||||||| Sbjct 1283224 TAGGTTTCATATGGTCCATGCTCCTTAGCAAGGTCACAGCTGGCTTCCAAGGCTCCGTAA 1283283 Query 79360 TAAATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGGCTATCAAATGGATAA 79419 ||||| ||||| || |||| |||||| | || |||||| || ||||| || || Sbjct 1283284 TAAATAGTTTCAAAGATCTGCTTATTCAATAGCTGGGCTTCTGCACTCTCAAAAGGGTAT 1283343 Query 79420 TTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTC 79479 | | || ||||| || ||||| | ||||| || ||||| || || || | ||| | Sbjct 1283344 CTCATCAGGATAAAAGCATCTGCCAGACCTTGTACCCCAATTCCAATGGGGCGATGACGT 1283403 Query 79480 TTATTAGA 79487 ||||| || Sbjct 1283404 TTATTTGA 1283411 >seq57 Length=8566406 Score = 107 bits (118), Expect = 3e-18 Identities = 104/134 (78%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 49984 TCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTA 50043 || ||||| || || ||||| ||||||||||||||||| ||||| || || | ||| || Sbjct 1418657 TCATCTCTGCTGATGAGTTCATTGGAAAACGTGAGTCCTGGCATAAGACCTCTCTTCTTT 1418716 Query 50044 AGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTTCTACTGCGGCAAAGGCA 50103 ||||| ||||| | ||||| || || || ||||| | ||||||||| || || ||||| Sbjct 1418717 AGCCAGAATATAGCAGCAAAAGATCCTGAGAAGAAAACTCCTTCTACAGCAGCGAAGGCC 1418776 Query 50104 ACAAGTCTCTCTCC 50117 || | ||| || || Sbjct 1418777 ACCACTCTTTCCCC 1418790 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718204550855840