Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cebus_20capucinus_20imitator_20[refseq_20GCF_5F001604975.1_202016- 04-04] 7,156 sequences; 2,717,703,182 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq526 370 1e-97 seq630 316 3e-81 seq28 246 4e-60 seq867 132 6e-26 seq2 123 3e-23 seq80 120 4e-22 seq57 111 2e-19 seq494 87.8 2e-12 >seq526 Length=1402496 Score = 370 bits (410), Expect = 1e-97 Identities = 650/939 (69%), Gaps = 18/939 (2%) Strand=Plus/Plus Query 41718 TTTAAAAGTCAACATCTAAAGAAAAATGATTGTCTTCTTGA---GACATAACTCCCATTT 41774 |||| || ||| || | || | |||| ||| ||| | || ||||| |||||||| Sbjct 113332 TTTAGAAATCAGCACCCAAGGTAAAAGAATTCTCTGTTGGACTTGACATCACTCCCATCC 113391 Query 41775 TTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTCTTTCCTTCCAATGATATATTTT 41834 | || || || || || | || || || || |||||||||||||||| ||| ||||| | Sbjct 113392 TCTGATACTCGCCTACTCTCTTCTCAAAGAAGTTAGTCTTTCCTTCCAGTGAAATATTCT 113451 Query 41835 CCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATCA 41894 |||| || ||||| ||||| | | ||| || |||| |||| ||| || Sbjct 113452 CCATAAAGTCAAATGGATTCTCTATTCTGAAAACCTTGCTAAAACCCAGTTCCAGCATG- 113510 Query 41895 ATCTATCTGCGATGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTT 41954 ||| ||||| | || || || ||| ||||| | |||||||| || || || | Sbjct 113511 -TCTGTCTGCCACAAACTCAATGTATTGCTTCATTAGAGTGCAATTCATCCCAATGAGCT 113569 Query 41955 TAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTA-TAATA 42013 || || | ||| |||||||||| |||||||| || || || | || || | || Sbjct 113570 CCACAGGCAAGGCCTCAGTAAGAAACTCTTGTTCTATCCGAACAGCAT-TGATAGTTATT 113628 Query 42014 GATCTTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACATGCGAAA 42073 ||||||| | || || ||| | | || ||||| ||||||| || || ||| Sbjct 113629 TCTCTTACTCTCTCCTCTGATGGTTTGTGTACTAGGTGTTTGAACATCAGGCAAGCAAAA 113688 Query 42074 TCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATT 42133 | |||| | |||||||||||| |||| | || | ||||| ||||| || ||||| Sbjct 113689 TGTGAGTGTAAACCCTCATCTCTGCTAAAAAGGTCATGAGAAAATGTGAGGCCAGGCATC 113748 Query 42134 AGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAGATTCCTTCT 42193 || || | || || ||||| ||||| || ||||| || ||||||||| |||| ||||| Sbjct 113749 AGTCCTCATTTCTTGAGCCAGAATATGGATGCAAAAGAACCAGAAAAGTAGATGCCTTCC 113808 Query 42194 ACTGCCGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCACTGTCATGTATCCACTTT 42250 ||||| |||||||| | || | || ||||| | | | |||| ||||| Sbjct 113809 ACTGCAGCAAAGGCTACAACGCGTTCACCATAGGTAGCCTCTTTGTCCCCAATCCAGCGC 113868 Query 42251 TGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAG 42310 |||||||| |||||||| || ||||||||||||||||| |||||||| |||||| | Sbjct 113869 AAGGCCCAATCTGCCTTCTTGTTGACACAAGGCATCGTTTCAATGGCATTGAAGAGAAAT 113928 Query 42311 tttttttCATTACTATCTTTAACATATGTATCGATCAAAAGACTATACATTTCTGAATGA 42370 | ||||||| |||||| | || || ||||| | |||| ||||||||| ||||| Sbjct 113929 TCCCTTTCATTGGGATCTTTTATGTAAGTGTCGATAAGGAGACCATACATTTCAGAATGT 113988 Query 42371 ATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGGTAACCTGTACTTCT 42430 |||||||| ||||| || || || || |||||||| | | | || |||| ||| | |||| Sbjct 113989 ATGTTTTCCATGGCAATTTGGAAGCCATAGAAACAGCAGCCTTCTGTAATCTGAAGTTCT 114048 Query 42431 GTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACTGGCTGCAAAAAACGCC 42490 | |||||| || | || ||||| || ||||| || ||||| ||||||| || ||| Sbjct 114049 TGGCTAAATCGCTCCACCAAGTTTTCATTTACTATGCCATCACTTGCTGCAAGGAAAGCC 114108 Query 42491 AATACATGTTTTATAAAATATTTTTCGTCCGGTGTTAATTTATTCCAATCATTG----AT 42546 | || || |||||| ||| | || || || || | ||||| || || || Sbjct 114109 AGAACGTGAGATATAAAGTATCTCTCCTCAGG-CTTCAGGGATTCC---CAGTGCCGTAT 114164 Query 42547 ATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCTTCTGCCTTTTTATACAT 42606 || || || | ||||| || || | |||| || || || || ||||| |||| ||| Sbjct 114165 GTCCTTGGACAGGTCTACCTCCTCAGCGCTCCAGAAGGAGGCGTCCGCCTTCTTATGCAT 114224 Query 42607 ATTCCAGATATCATGATATTGAATTGGGAAAATAACAAA 42645 | |||||| | || || | || |||||||| ||||| Sbjct 114225 CTGCCAGATGTTGTGGTACTCGATGGGGAAAATGACAAA 114263 >seq630 Length=879232 Score = 316 bits (350), Expect = 3e-81 Identities = 544/782 (70%), Gaps = 27/782 (3%) Strand=Plus/Plus Query 41718 TTTAAAAGTCAACATCTAAAGAAAAATGATTGTCTTCTTGA---GACATAACTCCCATTT 41774 |||| |||||| |||| || |||| ||| ||| || |||| |||||||| Sbjct 417478 TTTAGAAGTCAGCATCCAAGATAAAAGAATTCTCTGTGGGACTTGACACCACTCCCATCC 417537 Query 41775 TTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTCTTTCCTTCCAATGATATATTTT 41834 | | | ||||| || | || || || || ||| |||||||||||| || ||||| | Sbjct 417538 TCTAATGCTCACCTACTCTCTTCTCAAAGAAGTTAATCTTTCCTTCCAGTGGAATATTCT 417597 Query 41835 CCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATCA 41894 |||| || ||||| ||||| || | ||| || |||| |||| ||| || | Sbjct 417598 CCATAAAGTCAAATGGATTCTCTACTCTGAAAACCTTGCTAAAACCCAGTTCCAGCATAA 417657 Query 41895 ATCTATCTGCGATGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTT 41954 ||| ||||| | || || || ||| ||||| | |||||||| || || || | Sbjct 417658 GTCTGTCTGCCACAAACTCAATGTATTGCTTCATTAGAGTGCAATTCATCCCAATGAGCT 417717 Query 41955 TAACTGG-AAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAATA 42013 | || || |||| | |||| || || || ||||| || || || | | ||||| Sbjct 417718 TCACAGGCAAGATCT-CAGTGAGGAACTCCTGTTCTATCCGAACAGCAT---TGATAAT- 417772 Query 42014 GATCTTACTGTTTCTTCA--CTCGG-TGGATAC---AATAAATGTTTAAACATCAAACAT 42067 | || || ||||| | ||| | ||| | | || |||| ||||||| || Sbjct 417773 --TATTTCTCTTTCTCCCGGCTCTGATGGTTTGTGTACTAGGTGTTGGAACATCAGGCAA 417830 Query 42068 GCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCG 42127 || ||||| ||||| | |||||||||||| |||| | ||| || ||||| ||||| || Sbjct 417831 GCAAAATCACAGTGTAAACCCTCATCTCTGCTAAAAAGTTCATTAGAAAATGTGAGGCCA 417890 Query 42128 GGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAGATT 42187 ||||| || || || || |||||||| ||||| || || || || ||||||||||||| Sbjct 417891 GGCATCAGTCCTCGTTTCTTAAGCCAGAATATGGAAGCTAAAGAACCAGAAAAGAAGACG 417950 Query 42188 CCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCACTGTCATGTATC 42244 ||||| ||||| ||||||||| | || ||||| | | | |||| ||| Sbjct 417951 CCTTCCACTGCAGCAAAGGCAGT-------TCACCATAGGTAGCCTCTTTGTCCCCAATC 418003 Query 42245 CACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAG 42304 || |||| || |||||||| || ||||||||||||||||| |||||||| ||| Sbjct 418004 CAGCGCAAGGCCCGGTCTGCCTTCTTCTTGACACAAGGCATCGTTTCAATGGCATTGAAG 418063 Query 42305 AGATAGtttttttCATTACTATCTTTAACATATGTATCGATCAAAAGACTATACATTTCT 42364 ||| | | |||| | |||||| | ||| || || | | |||||||||||||| Sbjct 418064 AGAAATTCCCTTTCGCTGGGATCTTTTATATACGTGTCAGTAAGGAGACTATACATTTCA 418123 Query 42365 GAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGGTAACCTGT 42424 ||||| ||||| || ||| | || || ||||| |||||||| | |||||| |||| ||| Sbjct 418124 GAATGTATGTTGTCCATGCCAATTTGGAATCCATAGAAACAGCGGGCCTCTGTAATCTGA 418183 Query 42425 ACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACTGGCTGCAAAA 42484 |||||| | |||||| || | || ||||| || ||||| |||||||| |||||||| Sbjct 418184 ACTTCTTGGCTAAATCGCTCCACCAAGTTTTCATTTACTATGCCGTCACTTGCTGCAAAG 418243 Query 42485 AA 42486 || Sbjct 418244 AA 418245 >seq28 Length=17023488 Score = 246 bits (272), Expect = 4e-60 Identities = 545/810 (67%), Gaps = 12/810 (1%) Strand=Plus/Minus Query 72024 TCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTC 72083 || |||||| |||||| | | |||||||||||| ||| |||||||||| | || || Sbjct 16623679 TCATTTCATGAAGAGAGCTGCAATCCAAAGAGC---AAAAAGATCTCTGGCACGCTGTTC 16623623 Query 72084 CTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTC 72143 || ||| || ||||||| || | ||| | ||| | | || || ||||||| || || Sbjct 16623622 TTCCTTTTCTATATTCTTCTTTAAATCAAAGAATTCAAAGATGTCTAAATGCCAAGGCTC 16623563 Query 72144 CAAGTATATGGCCATAACTCCCGGCCGTTTGTTTCCTCCCT-GATCTATGTATCTAGCGG 72202 || ||| || || | |||| || | ||||| ||| ||| |||| | |||| ||| | Sbjct 16623562 CAGGTAAATAGCAAATGCTCCAGGACACTTGTT-CCTACCTCGATCCAGATATCAAGCTG 16623504 Query 72203 TGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGA 72262 |||| ||||| ||||||| ||| | | || |||||||| ||||| ||| | | | Sbjct 16623503 TGTTGTTATATACTCTCAGCATCAGTACAAGGCCATTGGAATTGCCATTCGTCTCAGCAA 16623444 Query 72263 TATAGCTTCCACTGGCACGAATATTGCTAATTGATAGACCTATTCCCCCTGCCATTTTAG 72322 | ||||| ||| | || | |||| || | | | ||| ||||| || | ||||| Sbjct 16623443 TGTAGCTGCCAGTAGCCCAAATACAACTCACAGCAACACCAATTCCTCCACCAGATTTAG 16623384 Query 72323 AGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGT 72382 | || ||||| || | |||| || ||||| ||||| || || || |||| |||| Sbjct 16623383 AAATCAATGCATATTGCTTTAGAGTGTCATAAATGCCTTCAATGCTGTCATATTTCATAC 16623324 Query 72383 TAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAG 72442 | || |||||||||||||| | ||| | | | || || || | || | || || | Sbjct 16623323 TCAGAAGAAAACAGCTAGAAAGTTGTGGGCAGTTGGTACCAACACTGAAGAGAGTTGGTG 16623264 Query 72443 AAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGT---ACGTCTCAATAGCTGATTCTA 72499 |||| || |||||| | | |||| || ||||||| || ||||| ||| || | Sbjct 16623263 AAGCATGAGTAAACTACCTCTCAGGAAGAAGATTGTCTGCTGTTTCAATTGCTACATCAA 16623204 Query 72500 TATCCCATTGATGTATTCCTACCGCGACACGCATTAACATATGCTGAGGTCTTTCAACGA 72559 | || || || ||||| || | | | ||| ||||||||| | ||| ||||| | | Sbjct 16623203 TGTCTTCTTTGTGGATTCCAACAGATGCTCTCATCAACATATGCCGTGGTATTTCAGCCA 16623144 Query 72560 TCTTGTTATTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGT 72619 || ||| ||||||||||| || || || | ||||||||||| || |||| Sbjct 16623143 CTTTTCCATTGATTTTCAACAAATAAGACCACTCTAGCAACTTAAAACCAAAGTAATTGT 16623084 Query 72620 ATGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGTTTATCCTTATATTTGTTAACTA 72679 | || || ||| | || | |||| | | ||||| | | ||| |||| ||| | Sbjct 16623083 AAGAGAAATCTTGGTCACAGATAACAGCAGAATTCAAGTGATCTTTATTGGCCAAAACAA 16623024 Query 72680 TATCCA-TGGTGATACTT-GAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATA 72737 |||||| || || |||| | | || ||||| | ||| |||| | ||| | | | Sbjct 16623023 TATCCAGTGCTG--ACTTGGCCACCATGGGAGAGTATTTGTCATTATGTGGACTTATGCA 16622966 Query 72738 GTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGA 72797 ||| | | || |||||||| ||||| || | || |||||||| ||||| | || || Sbjct 16622965 GTTATACAGGTCTTCCATCACATCACTGAACACTTCATTTGTTTCTTTGTGCAAGTTAGA 16622906 Query 72798 TACGGCTATTCTGGCGGCTAGAATGGCATA 72827 || || | || || || || || ||||| Sbjct 16622905 GACAGCAGTCCTAGCTGCCAGGATAGCATA 16622876 >seq867 Length=266704 Score = 132 bits (146), Expect = 6e-26 Identities = 259/382 (68%), Gaps = 3/382 (1%) Strand=Plus/Minus Query 41718 TTTAAAAGTCAACATCTAAAGAAAAATGATTGTCTTCTTGA---GACATAACTCCCATTT 41774 |||| |||||| |||| || | ||||| ||| ||| | || ||||| |||||||| Sbjct 180931 TTTAGAAGTCAGCATCCAAGGTAAAATAATTCTCTGTTGGACTTGACATCACTCCCATCC 180872 Query 41775 TTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTCTTTCCTTCCAATGATATATTTT 41834 | || || ||||| || | ||||| || || |||||||||||||||| ||| ||||| | Sbjct 180871 TCTGATACTCACCTACTCTCTTTTCAAAGAAGTTAGTCTTTCCTTCCAGTGAAATATTCT 180812 Query 41835 CCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATCA 41894 |||| || ||||| ||||| || | ||| || |||| ||| |||| || | Sbjct 180811 CCATAAAGTCAAATGGATTCTCTACTCTGAAAACCTTGCTAAAACCCGATTCCAGCATAA 180752 Query 41895 ATCTATCTGCGATGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTT 41954 ||||||||| | || || || ||| ||||| | ||||||||||| || || | Sbjct 180751 GTCTATCTGCCACAAACTCAATGTATTGCTTCATTAGAGTGCAATTCATTCCGATGAGCT 180692 Query 41955 TAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAATAG 42014 | || || ||| |||| || || || ||||| || || || | | || || Sbjct 180691 TCACAGGCGAGGCCTCAGTGAGGAACTCCTGTTCTATCCGAACAGCATTGATAATTATTT 180632 Query 42015 ATCTTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACATGCGAAAT 42074 ||||||| | || || ||| | | || |||||| |||| || || | |||| Sbjct 180631 CTCTTACTCTCTCCTCTGATGGTTTGTGTACTAGATGTTTGAACAACAGGCAAACAAAAT 180572 Query 42075 CGCAGTGCAGACCCTCATCTCT 42096 | ||||| | |||| ||||| Sbjct 180571 CACAGTGTAAACCCGATTCTCT 180550 >seq2 Length=18007423 Score = 123 bits (136), Expect = 3e-23 Identities = 100/121 (83%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 42087 CCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 42146 |||||||||| ||||| | ||| || ||||| ||||| || ||||| || || || || | Sbjct 1941489 CCTCATCTCTGCTAATAAGTTCATTAGAAAATGTGAGGCCAGGCATCAGTCCTCGTTTCT 1941430 Query 42147 TAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAGATTCCTTCTACTGCCGCAAAGG 42206 | ||||| ||||| || ||||| || |||||||||||||| ||||||||||| ||||||| Sbjct 1941429 TGAGCCAGAATATGGATGCAAAAGAACCAGAAAAGAAGATGCCTTCTACTGCAGCAAAGG 1941370 Query 42207 C 42207 | Sbjct 1941369 C 1941369 Score = 91.5 bits (100), Expect = 2e-13 Identities = 92/120 (77%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 42325 ATCTTTAACATATGTATCGATCAAAAGACTATACATTTCTGAATGAATGTTTTCAATGGC 42384 |||||| | || || || || | |||||||||||||| ||||| |||||||| ||||| Sbjct 1939021 ATCTTTTATGTAAGTGTCAATAAGGAGACTATACATTTCAGAATGTATGTTTTCCATGGC 1938962 Query 42385 CATCTGAAATCCGTAGAAACATCTGGCCTCGGTAACCTGTACTTCTGTACAAAATCGTTC 42444 || || || || |||||||| | ||| || |||| ||| |||||| | |||||| || Sbjct 1938961 AATTTGGAAACCATAGAAACAGCGGGCTTCTGTAATCTGAACTTCTTGGCTAAATCGCTC 1938902 Score = 91.5 bits (100), Expect = 2e-13 Identities = 104/139 (75%), Gaps = 3/139 (2%) Strand=Plus/Minus Query 41718 TTTAAAAGTCAACATCTAAAGAAAAATGATTGTCTTCTTGA---GACATAACTCCCATTT 41774 |||| |||||| |||| || | |||| ||| ||| | || ||||| |||||||| Sbjct 1943294 TTTAGAAGTCAGCATCCAAGGTAAAAGAATTCTCTGTTGGACTTGACATCACTCCCATCC 1943235 Query 41775 TTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTCTTTCCTTCCAATGATATATTTT 41834 | || || || || || | || || || || |||||||||||||||| ||| ||||| | Sbjct 1943234 TCTGATACTCGCCTACTCTCTTCTCAAAGAAGTTAGTCTTTCCTTCCAGTGAAATATTCT 1943175 Query 41835 CCATGAAATCAAACGGATT 41853 |||| || ||||| ||||| Sbjct 1943174 CCATAAAGTCAAATGGATT 1943156 >seq80 Length=8459403 Score = 120 bits (132), Expect = 4e-22 Identities = 129/171 (75%), Gaps = 0/171 (0%) Strand=Plus/Plus Query 70868 TCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAGCTAGGATCGGCTATGTGAATAT 70927 |||| ||||| || |||||||| || |||||| |||| |||| || || ||||| || | Sbjct 1275313 TCCAGCCGTAGAAGTGCATACTAGTGAGTTTGCCATAGTTAGGCTCAGCAATGTGGATGT 1275372 Query 70928 TCATCGACTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCT 70987 ||| ||||| |||||||| ||||| || || || || |||||||| || | | || | Sbjct 1275373 TCAAAGACTGGCTTTGATCAATGAAAGCACCTCTCTCAGCAGCCATCTTGAGAACAGTTT 1275432 Query 70988 TTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAA 71038 | || | |||||||| | ||||||||||| | |||| | || || |||| Sbjct 1275433 TCTGAGAGATTTCCCACACAGTTTTATAAAGTTGCTTCAGGTCATCAGGAA 1275483 Score = 107 bits (118), Expect = 3e-18 Identities = 104/134 (78%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 72022 ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGC 72081 ||||||||||| |||||||| |||||||||||||| | ||| |||||||||| | || Sbjct 1289066 ACTCGTTTCATGAAGAGATCCGGAATCCAAAGAGCAAAAAAAAGATCTCTGGCACGCTGT 1289125 Query 72082 TCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGT 72141 || || |||||||| ||||| || | ||| ||||| | | || || ||||||| || Sbjct 1289126 TCTTCCTTTCCTGTGTTCTTCTTTAAATCCAGGAATTCAAAGATGTCTAAATGCCAAGGC 1289185 Query 72142 TCCAAGTATATGGC 72155 |||| ||| || || Sbjct 1289186 TCCAGGTAAATAGC 1289199 Score = 105 bits (116), Expect = 9e-18 Identities = 105/136 (77%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 71143 ACTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATACGGTTCCACT 71202 || ||||||||||| ||||| ||||| ||||| || || || ||||| || ||||| | Sbjct 1278101 ACCTGAAATTCTCCTGACAAGACTCTGCGAGTATAGATGTTGCTGGTGTAAGGTTCAATA 1278160 Query 71203 GACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAGA 71262 ||||||||||| |||| || |||||||| || || || ||||| || || | | || | Sbjct 1278161 GACTCATTATTCCCCAGGATCTGAGCAGTGGAAGCTGTAGGCATCGGGGCAATAAGTAAA 1278220 Query 71263 CTATTTCTAAGACCAT 71278 || ||||| | ||||| Sbjct 1278221 CTGTTTCTTATACCAT 1278236 >seq57 Length=8566406 Score = 111 bits (122), Expect = 2e-19 Identities = 96/119 (81%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 42089 TCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTA 42148 |||||||| || || | ||| ||||||||||||||||| ||||| || || | ||| || Sbjct 1418657 TCATCTCTGCTGATGAGTTCATTGGAAAACGTGAGTCCTGGCATAAGACCTCTCTTCTTT 1418716 Query 42149 AGCCAAAATATAGACGCAAATGATCCAGAAAAGAAGATTCCTTCTACTGCCGCAAAGGC 42207 ||||| ||||||| ||||| ||||| || ||||| | ||||||||| || || ||||| Sbjct 1418717 AGCCAGAATATAGCAGCAAAAGATCCTGAGAAGAAAACTCCTTCTACAGCAGCGAAGGC 1418775 >seq494 Length=1524325 Score = 87.8 bits (96), Expect = 2e-12 Identities = 99/132 (75%), Gaps = 3/132 (2%) Strand=Plus/Plus Query 41709 TTATGTTTCTTTAAAAGTCAACATCTAAAGAAAAATGATTGTCTTCTTGA---GACATAA 41765 ||| | || |||| |||||| |||| |||| |||| ||| ||| || | ||||| | Sbjct 779243 TTAAGCTTGTTTAGAAGTCAGCATCCAAAGTAAAAGAATTATCTATTTTACTTGACATCA 779302 Query 41766 CTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTCTTTCCTTCCAATG 41825 || |||| ||||| |||||||| || | || || || || ||| |||||||||||| || Sbjct 779303 CTGCCATCTTTTGATATTCACCTACTCTCTTCTCAAAGAACTTAATCTTTCCTTCCAGTG 779362 Query 41826 ATATATTTTCCA 41837 | || || |||| Sbjct 779363 AAATGTTCTCCA 779374 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671079166598560