Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cebus_20capucinus_20imitator_20[refseq_20GCF_5F001604975.1_202016-
04-04] 7,156 sequences; 2,717,703,182 total letters
Query= NC_004105.1
Length=209771
Score E
Sequences producing significant alignments: (Bits) Value
seq526 370 1e-97
seq630 316 3e-81
seq28 246 4e-60
seq867 132 6e-26
seq2 123 3e-23
seq80 120 4e-22
seq57 111 2e-19
seq494 87.8 2e-12
>seq526
Length=1402496
Score = 370 bits (410), Expect = 1e-97
Identities = 650/939 (69%), Gaps = 18/939 (2%)
Strand=Plus/Plus
Query 41718 TTTAAAAGTCAACATCTAAAGAAAAATGATTGTCTTCTTGA---GACATAACTCCCATTT 41774
|||| || ||| || | || | |||| ||| ||| | || ||||| ||||||||
Sbjct 113332 TTTAGAAATCAGCACCCAAGGTAAAAGAATTCTCTGTTGGACTTGACATCACTCCCATCC 113391
Query 41775 TTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTCTTTCCTTCCAATGATATATTTT 41834
| || || || || || | || || || || |||||||||||||||| ||| ||||| |
Sbjct 113392 TCTGATACTCGCCTACTCTCTTCTCAAAGAAGTTAGTCTTTCCTTCCAGTGAAATATTCT 113451
Query 41835 CCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATCA 41894
|||| || ||||| ||||| | | ||| || |||| |||| ||| ||
Sbjct 113452 CCATAAAGTCAAATGGATTCTCTATTCTGAAAACCTTGCTAAAACCCAGTTCCAGCATG- 113510
Query 41895 ATCTATCTGCGATGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTT 41954
||| ||||| | || || || ||| ||||| | |||||||| || || || |
Sbjct 113511 -TCTGTCTGCCACAAACTCAATGTATTGCTTCATTAGAGTGCAATTCATCCCAATGAGCT 113569
Query 41955 TAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTA-TAATA 42013
|| || | ||| |||||||||| |||||||| || || || | || || | ||
Sbjct 113570 CCACAGGCAAGGCCTCAGTAAGAAACTCTTGTTCTATCCGAACAGCAT-TGATAGTTATT 113628
Query 42014 GATCTTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACATGCGAAA 42073
||||||| | || || ||| | | || ||||| ||||||| || || |||
Sbjct 113629 TCTCTTACTCTCTCCTCTGATGGTTTGTGTACTAGGTGTTTGAACATCAGGCAAGCAAAA 113688
Query 42074 TCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATT 42133
| |||| | |||||||||||| |||| | || | ||||| ||||| || |||||
Sbjct 113689 TGTGAGTGTAAACCCTCATCTCTGCTAAAAAGGTCATGAGAAAATGTGAGGCCAGGCATC 113748
Query 42134 AGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAGATTCCTTCT 42193
|| || | || || ||||| ||||| || ||||| || ||||||||| |||| |||||
Sbjct 113749 AGTCCTCATTTCTTGAGCCAGAATATGGATGCAAAAGAACCAGAAAAGTAGATGCCTTCC 113808
Query 42194 ACTGCCGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCACTGTCATGTATCCACTTT 42250
||||| |||||||| | || | || ||||| | | | |||| |||||
Sbjct 113809 ACTGCAGCAAAGGCTACAACGCGTTCACCATAGGTAGCCTCTTTGTCCCCAATCCAGCGC 113868
Query 42251 TGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAG 42310
|||||||| |||||||| || ||||||||||||||||| |||||||| |||||| |
Sbjct 113869 AAGGCCCAATCTGCCTTCTTGTTGACACAAGGCATCGTTTCAATGGCATTGAAGAGAAAT 113928
Query 42311 tttttttCATTACTATCTTTAACATATGTATCGATCAAAAGACTATACATTTCTGAATGA 42370
| ||||||| |||||| | || || ||||| | |||| ||||||||| |||||
Sbjct 113929 TCCCTTTCATTGGGATCTTTTATGTAAGTGTCGATAAGGAGACCATACATTTCAGAATGT 113988
Query 42371 ATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGGTAACCTGTACTTCT 42430
|||||||| ||||| || || || || |||||||| | | | || |||| ||| | ||||
Sbjct 113989 ATGTTTTCCATGGCAATTTGGAAGCCATAGAAACAGCAGCCTTCTGTAATCTGAAGTTCT 114048
Query 42431 GTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACTGGCTGCAAAAAACGCC 42490
| |||||| || | || ||||| || ||||| || ||||| ||||||| || |||
Sbjct 114049 TGGCTAAATCGCTCCACCAAGTTTTCATTTACTATGCCATCACTTGCTGCAAGGAAAGCC 114108
Query 42491 AATACATGTTTTATAAAATATTTTTCGTCCGGTGTTAATTTATTCCAATCATTG----AT 42546
| || || |||||| ||| | || || || || | ||||| || || ||
Sbjct 114109 AGAACGTGAGATATAAAGTATCTCTCCTCAGG-CTTCAGGGATTCC---CAGTGCCGTAT 114164
Query 42547 ATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCTTCTGCCTTTTTATACAT 42606
|| || || | ||||| || || | |||| || || || || ||||| |||| |||
Sbjct 114165 GTCCTTGGACAGGTCTACCTCCTCAGCGCTCCAGAAGGAGGCGTCCGCCTTCTTATGCAT 114224
Query 42607 ATTCCAGATATCATGATATTGAATTGGGAAAATAACAAA 42645
| |||||| | || || | || |||||||| |||||
Sbjct 114225 CTGCCAGATGTTGTGGTACTCGATGGGGAAAATGACAAA 114263
>seq630
Length=879232
Score = 316 bits (350), Expect = 3e-81
Identities = 544/782 (70%), Gaps = 27/782 (3%)
Strand=Plus/Plus
Query 41718 TTTAAAAGTCAACATCTAAAGAAAAATGATTGTCTTCTTGA---GACATAACTCCCATTT 41774
|||| |||||| |||| || |||| ||| ||| || |||| ||||||||
Sbjct 417478 TTTAGAAGTCAGCATCCAAGATAAAAGAATTCTCTGTGGGACTTGACACCACTCCCATCC 417537
Query 41775 TTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTCTTTCCTTCCAATGATATATTTT 41834
| | | ||||| || | || || || || ||| |||||||||||| || ||||| |
Sbjct 417538 TCTAATGCTCACCTACTCTCTTCTCAAAGAAGTTAATCTTTCCTTCCAGTGGAATATTCT 417597
Query 41835 CCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATCA 41894
|||| || ||||| ||||| || | ||| || |||| |||| ||| || |
Sbjct 417598 CCATAAAGTCAAATGGATTCTCTACTCTGAAAACCTTGCTAAAACCCAGTTCCAGCATAA 417657
Query 41895 ATCTATCTGCGATGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTT 41954
||| ||||| | || || || ||| ||||| | |||||||| || || || |
Sbjct 417658 GTCTGTCTGCCACAAACTCAATGTATTGCTTCATTAGAGTGCAATTCATCCCAATGAGCT 417717
Query 41955 TAACTGG-AAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAATA 42013
| || || |||| | |||| || || || ||||| || || || | | |||||
Sbjct 417718 TCACAGGCAAGATCT-CAGTGAGGAACTCCTGTTCTATCCGAACAGCAT---TGATAAT- 417772
Query 42014 GATCTTACTGTTTCTTCA--CTCGG-TGGATAC---AATAAATGTTTAAACATCAAACAT 42067
| || || ||||| | ||| | ||| | | || |||| ||||||| ||
Sbjct 417773 --TATTTCTCTTTCTCCCGGCTCTGATGGTTTGTGTACTAGGTGTTGGAACATCAGGCAA 417830
Query 42068 GCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCG 42127
|| ||||| ||||| | |||||||||||| |||| | ||| || ||||| ||||| ||
Sbjct 417831 GCAAAATCACAGTGTAAACCCTCATCTCTGCTAAAAAGTTCATTAGAAAATGTGAGGCCA 417890
Query 42128 GGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAGATT 42187
||||| || || || || |||||||| ||||| || || || || |||||||||||||
Sbjct 417891 GGCATCAGTCCTCGTTTCTTAAGCCAGAATATGGAAGCTAAAGAACCAGAAAAGAAGACG 417950
Query 42188 CCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCACTGTCATGTATC 42244
||||| ||||| ||||||||| | || ||||| | | | |||| |||
Sbjct 417951 CCTTCCACTGCAGCAAAGGCAGT-------TCACCATAGGTAGCCTCTTTGTCCCCAATC 418003
Query 42245 CACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAG 42304
|| |||| || |||||||| || ||||||||||||||||| |||||||| |||
Sbjct 418004 CAGCGCAAGGCCCGGTCTGCCTTCTTCTTGACACAAGGCATCGTTTCAATGGCATTGAAG 418063
Query 42305 AGATAGtttttttCATTACTATCTTTAACATATGTATCGATCAAAAGACTATACATTTCT 42364
||| | | |||| | |||||| | ||| || || | | ||||||||||||||
Sbjct 418064 AGAAATTCCCTTTCGCTGGGATCTTTTATATACGTGTCAGTAAGGAGACTATACATTTCA 418123
Query 42365 GAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGGTAACCTGT 42424
||||| ||||| || ||| | || || ||||| |||||||| | |||||| |||| |||
Sbjct 418124 GAATGTATGTTGTCCATGCCAATTTGGAATCCATAGAAACAGCGGGCCTCTGTAATCTGA 418183
Query 42425 ACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACTGGCTGCAAAA 42484
|||||| | |||||| || | || ||||| || ||||| |||||||| ||||||||
Sbjct 418184 ACTTCTTGGCTAAATCGCTCCACCAAGTTTTCATTTACTATGCCGTCACTTGCTGCAAAG 418243
Query 42485 AA 42486
||
Sbjct 418244 AA 418245
>seq28
Length=17023488
Score = 246 bits (272), Expect = 4e-60
Identities = 545/810 (67%), Gaps = 12/810 (1%)
Strand=Plus/Minus
Query 72024 TCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTC 72083
|| |||||| |||||| | | |||||||||||| ||| |||||||||| | || ||
Sbjct 16623679 TCATTTCATGAAGAGAGCTGCAATCCAAAGAGC---AAAAAGATCTCTGGCACGCTGTTC 16623623
Query 72084 CTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTC 72143
|| ||| || ||||||| || | ||| | ||| | | || || ||||||| || ||
Sbjct 16623622 TTCCTTTTCTATATTCTTCTTTAAATCAAAGAATTCAAAGATGTCTAAATGCCAAGGCTC 16623563
Query 72144 CAAGTATATGGCCATAACTCCCGGCCGTTTGTTTCCTCCCT-GATCTATGTATCTAGCGG 72202
|| ||| || || | |||| || | ||||| ||| ||| |||| | |||| ||| |
Sbjct 16623562 CAGGTAAATAGCAAATGCTCCAGGACACTTGTT-CCTACCTCGATCCAGATATCAAGCTG 16623504
Query 72203 TGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGA 72262
|||| ||||| ||||||| ||| | | || |||||||| ||||| ||| | | |
Sbjct 16623503 TGTTGTTATATACTCTCAGCATCAGTACAAGGCCATTGGAATTGCCATTCGTCTCAGCAA 16623444
Query 72263 TATAGCTTCCACTGGCACGAATATTGCTAATTGATAGACCTATTCCCCCTGCCATTTTAG 72322
| ||||| ||| | || | |||| || | | | ||| ||||| || | |||||
Sbjct 16623443 TGTAGCTGCCAGTAGCCCAAATACAACTCACAGCAACACCAATTCCTCCACCAGATTTAG 16623384
Query 72323 AGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGT 72382
| || ||||| || | |||| || ||||| ||||| || || || |||| ||||
Sbjct 16623383 AAATCAATGCATATTGCTTTAGAGTGTCATAAATGCCTTCAATGCTGTCATATTTCATAC 16623324
Query 72383 TAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAG 72442
| || |||||||||||||| | ||| | | | || || || | || | || || |
Sbjct 16623323 TCAGAAGAAAACAGCTAGAAAGTTGTGGGCAGTTGGTACCAACACTGAAGAGAGTTGGTG 16623264
Query 72443 AAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGT---ACGTCTCAATAGCTGATTCTA 72499
|||| || |||||| | | |||| || ||||||| || ||||| ||| || |
Sbjct 16623263 AAGCATGAGTAAACTACCTCTCAGGAAGAAGATTGTCTGCTGTTTCAATTGCTACATCAA 16623204
Query 72500 TATCCCATTGATGTATTCCTACCGCGACACGCATTAACATATGCTGAGGTCTTTCAACGA 72559
| || || || ||||| || | | | ||| ||||||||| | ||| ||||| | |
Sbjct 16623203 TGTCTTCTTTGTGGATTCCAACAGATGCTCTCATCAACATATGCCGTGGTATTTCAGCCA 16623144
Query 72560 TCTTGTTATTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGT 72619
|| ||| ||||||||||| || || || | ||||||||||| || ||||
Sbjct 16623143 CTTTTCCATTGATTTTCAACAAATAAGACCACTCTAGCAACTTAAAACCAAAGTAATTGT 16623084
Query 72620 ATGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGTTTATCCTTATATTTGTTAACTA 72679
| || || ||| | || | |||| | | ||||| | | ||| |||| ||| |
Sbjct 16623083 AAGAGAAATCTTGGTCACAGATAACAGCAGAATTCAAGTGATCTTTATTGGCCAAAACAA 16623024
Query 72680 TATCCA-TGGTGATACTT-GAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATA 72737
|||||| || || |||| | | || ||||| | ||| |||| | ||| | | |
Sbjct 16623023 TATCCAGTGCTG--ACTTGGCCACCATGGGAGAGTATTTGTCATTATGTGGACTTATGCA 16622966
Query 72738 GTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGA 72797
||| | | || |||||||| ||||| || | || |||||||| ||||| | || ||
Sbjct 16622965 GTTATACAGGTCTTCCATCACATCACTGAACACTTCATTTGTTTCTTTGTGCAAGTTAGA 16622906
Query 72798 TACGGCTATTCTGGCGGCTAGAATGGCATA 72827
|| || | || || || || || |||||
Sbjct 16622905 GACAGCAGTCCTAGCTGCCAGGATAGCATA 16622876
>seq867
Length=266704
Score = 132 bits (146), Expect = 6e-26
Identities = 259/382 (68%), Gaps = 3/382 (1%)
Strand=Plus/Minus
Query 41718 TTTAAAAGTCAACATCTAAAGAAAAATGATTGTCTTCTTGA---GACATAACTCCCATTT 41774
|||| |||||| |||| || | ||||| ||| ||| | || ||||| ||||||||
Sbjct 180931 TTTAGAAGTCAGCATCCAAGGTAAAATAATTCTCTGTTGGACTTGACATCACTCCCATCC 180872
Query 41775 TTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTCTTTCCTTCCAATGATATATTTT 41834
| || || ||||| || | ||||| || || |||||||||||||||| ||| ||||| |
Sbjct 180871 TCTGATACTCACCTACTCTCTTTTCAAAGAAGTTAGTCTTTCCTTCCAGTGAAATATTCT 180812
Query 41835 CCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATCA 41894
|||| || ||||| ||||| || | ||| || |||| ||| |||| || |
Sbjct 180811 CCATAAAGTCAAATGGATTCTCTACTCTGAAAACCTTGCTAAAACCCGATTCCAGCATAA 180752
Query 41895 ATCTATCTGCGATGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTT 41954
||||||||| | || || || ||| ||||| | ||||||||||| || || |
Sbjct 180751 GTCTATCTGCCACAAACTCAATGTATTGCTTCATTAGAGTGCAATTCATTCCGATGAGCT 180692
Query 41955 TAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAATAG 42014
| || || ||| |||| || || || ||||| || || || | | || ||
Sbjct 180691 TCACAGGCGAGGCCTCAGTGAGGAACTCCTGTTCTATCCGAACAGCATTGATAATTATTT 180632
Query 42015 ATCTTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACATGCGAAAT 42074
||||||| | || || ||| | | || |||||| |||| || || | ||||
Sbjct 180631 CTCTTACTCTCTCCTCTGATGGTTTGTGTACTAGATGTTTGAACAACAGGCAAACAAAAT 180572
Query 42075 CGCAGTGCAGACCCTCATCTCT 42096
| ||||| | |||| |||||
Sbjct 180571 CACAGTGTAAACCCGATTCTCT 180550
>seq2
Length=18007423
Score = 123 bits (136), Expect = 3e-23
Identities = 100/121 (83%), Gaps = 0/121 (0%)
Strand=Plus/Minus
Query 42087 CCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 42146
|||||||||| ||||| | ||| || ||||| ||||| || ||||| || || || || |
Sbjct 1941489 CCTCATCTCTGCTAATAAGTTCATTAGAAAATGTGAGGCCAGGCATCAGTCCTCGTTTCT 1941430
Query 42147 TAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAGATTCCTTCTACTGCCGCAAAGG 42206
| ||||| ||||| || ||||| || |||||||||||||| ||||||||||| |||||||
Sbjct 1941429 TGAGCCAGAATATGGATGCAAAAGAACCAGAAAAGAAGATGCCTTCTACTGCAGCAAAGG 1941370
Query 42207 C 42207
|
Sbjct 1941369 C 1941369
Score = 91.5 bits (100), Expect = 2e-13
Identities = 92/120 (77%), Gaps = 0/120 (0%)
Strand=Plus/Minus
Query 42325 ATCTTTAACATATGTATCGATCAAAAGACTATACATTTCTGAATGAATGTTTTCAATGGC 42384
|||||| | || || || || | |||||||||||||| ||||| |||||||| |||||
Sbjct 1939021 ATCTTTTATGTAAGTGTCAATAAGGAGACTATACATTTCAGAATGTATGTTTTCCATGGC 1938962
Query 42385 CATCTGAAATCCGTAGAAACATCTGGCCTCGGTAACCTGTACTTCTGTACAAAATCGTTC 42444
|| || || || |||||||| | ||| || |||| ||| |||||| | |||||| ||
Sbjct 1938961 AATTTGGAAACCATAGAAACAGCGGGCTTCTGTAATCTGAACTTCTTGGCTAAATCGCTC 1938902
Score = 91.5 bits (100), Expect = 2e-13
Identities = 104/139 (75%), Gaps = 3/139 (2%)
Strand=Plus/Minus
Query 41718 TTTAAAAGTCAACATCTAAAGAAAAATGATTGTCTTCTTGA---GACATAACTCCCATTT 41774
|||| |||||| |||| || | |||| ||| ||| | || ||||| ||||||||
Sbjct 1943294 TTTAGAAGTCAGCATCCAAGGTAAAAGAATTCTCTGTTGGACTTGACATCACTCCCATCC 1943235
Query 41775 TTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTCTTTCCTTCCAATGATATATTTT 41834
| || || || || || | || || || || |||||||||||||||| ||| ||||| |
Sbjct 1943234 TCTGATACTCGCCTACTCTCTTCTCAAAGAAGTTAGTCTTTCCTTCCAGTGAAATATTCT 1943175
Query 41835 CCATGAAATCAAACGGATT 41853
|||| || ||||| |||||
Sbjct 1943174 CCATAAAGTCAAATGGATT 1943156
>seq80
Length=8459403
Score = 120 bits (132), Expect = 4e-22
Identities = 129/171 (75%), Gaps = 0/171 (0%)
Strand=Plus/Plus
Query 70868 TCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAGCTAGGATCGGCTATGTGAATAT 70927
|||| ||||| || |||||||| || |||||| |||| |||| || || ||||| || |
Sbjct 1275313 TCCAGCCGTAGAAGTGCATACTAGTGAGTTTGCCATAGTTAGGCTCAGCAATGTGGATGT 1275372
Query 70928 TCATCGACTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCT 70987
||| ||||| |||||||| ||||| || || || || |||||||| || | | || |
Sbjct 1275373 TCAAAGACTGGCTTTGATCAATGAAAGCACCTCTCTCAGCAGCCATCTTGAGAACAGTTT 1275432
Query 70988 TTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAA 71038
| || | |||||||| | ||||||||||| | |||| | || || ||||
Sbjct 1275433 TCTGAGAGATTTCCCACACAGTTTTATAAAGTTGCTTCAGGTCATCAGGAA 1275483
Score = 107 bits (118), Expect = 3e-18
Identities = 104/134 (78%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 72022 ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGC 72081
||||||||||| |||||||| |||||||||||||| | ||| |||||||||| | ||
Sbjct 1289066 ACTCGTTTCATGAAGAGATCCGGAATCCAAAGAGCAAAAAAAAGATCTCTGGCACGCTGT 1289125
Query 72082 TCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGT 72141
|| || |||||||| ||||| || | ||| ||||| | | || || ||||||| ||
Sbjct 1289126 TCTTCCTTTCCTGTGTTCTTCTTTAAATCCAGGAATTCAAAGATGTCTAAATGCCAAGGC 1289185
Query 72142 TCCAAGTATATGGC 72155
|||| ||| || ||
Sbjct 1289186 TCCAGGTAAATAGC 1289199
Score = 105 bits (116), Expect = 9e-18
Identities = 105/136 (77%), Gaps = 0/136 (0%)
Strand=Plus/Plus
Query 71143 ACTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATACGGTTCCACT 71202
|| ||||||||||| ||||| ||||| ||||| || || || ||||| || ||||| |
Sbjct 1278101 ACCTGAAATTCTCCTGACAAGACTCTGCGAGTATAGATGTTGCTGGTGTAAGGTTCAATA 1278160
Query 71203 GACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAGA 71262
||||||||||| |||| || |||||||| || || || ||||| || || | | || |
Sbjct 1278161 GACTCATTATTCCCCAGGATCTGAGCAGTGGAAGCTGTAGGCATCGGGGCAATAAGTAAA 1278220
Query 71263 CTATTTCTAAGACCAT 71278
|| ||||| | |||||
Sbjct 1278221 CTGTTTCTTATACCAT 1278236
>seq57
Length=8566406
Score = 111 bits (122), Expect = 2e-19
Identities = 96/119 (81%), Gaps = 0/119 (0%)
Strand=Plus/Plus
Query 42089 TCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTA 42148
|||||||| || || | ||| ||||||||||||||||| ||||| || || | ||| ||
Sbjct 1418657 TCATCTCTGCTGATGAGTTCATTGGAAAACGTGAGTCCTGGCATAAGACCTCTCTTCTTT 1418716
Query 42149 AGCCAAAATATAGACGCAAATGATCCAGAAAAGAAGATTCCTTCTACTGCCGCAAAGGC 42207
||||| ||||||| ||||| ||||| || ||||| | ||||||||| || || |||||
Sbjct 1418717 AGCCAGAATATAGCAGCAAAAGATCCTGAGAAGAAAACTCCTTCTACAGCAGCGAAGGC 1418775
>seq494
Length=1524325
Score = 87.8 bits (96), Expect = 2e-12
Identities = 99/132 (75%), Gaps = 3/132 (2%)
Strand=Plus/Plus
Query 41709 TTATGTTTCTTTAAAAGTCAACATCTAAAGAAAAATGATTGTCTTCTTGA---GACATAA 41765
||| | || |||| |||||| |||| |||| |||| ||| ||| || | ||||| |
Sbjct 779243 TTAAGCTTGTTTAGAAGTCAGCATCCAAAGTAAAAGAATTATCTATTTTACTTGACATCA 779302
Query 41766 CTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTCTTTCCTTCCAATG 41825
|| |||| ||||| |||||||| || | || || || || ||| |||||||||||| ||
Sbjct 779303 CTGCCATCTTTTGATATTCACCTACTCTCTTCTCAAAGAACTTAATCTTTCCTTCCAGTG 779362
Query 41826 ATATATTTTCCA 41837
| || || ||||
Sbjct 779363 AAATGTTCTCCA 779374
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 671079166598560
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