Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cebus_20capucinus_20imitator_20[refseq_20GCF_5F001604975.1_202016-
04-04] 7,156 sequences; 2,717,703,182 total letters
Query= NC_005038.1
Length=99657
Score E
Sequences producing significant alignments: (Bits) Value
seq72 87.8 1e-12
>seq72
Length=7750101
Score = 87.8 bits (96), Expect = 1e-12
Identities = 153/220 (70%), Gaps = 7/220 (3%)
Strand=Plus/Plus
Query 33157 CAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGGTC 33216
|||||| | ||| | || ||||| || || || ||||| ||||| ||| || || ||
Sbjct 2355990 CAACACAAGATGAAGAGTAGACTCCTTCTGAATGTTGTAGTCAGATAAAGTGCGTCCATC 2356049
Query 33217 ATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTTTC 33276
|||| | ||| ||| ||| || | | |||||| || | || || ||||| || ||
Sbjct 2356050 TTCCAGTGTCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATC 2356109
Query 33277 ---GCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTAT 33333
| | | |||| |||| ||| ||||| || ||||| ||| || || || ||
Sbjct 2356110 CTGGATTTTGGCCT---TTACATTTTCTATCGTATCCGAGGGTTCAACCTCGAGGGTAAT 2356166
Query 33334 CGTTTTTCCC-GTAAGAGTTTTTACGAAAATTTGCATGTT 33372
|| |||||| ||||||||||| || ||||| ||||| ||
Sbjct 2356167 GGTCTTTCCCCGTAAGAGTTTTCACAAAAATCTGCATTTT 2356206
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 318749798210088
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |