Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cebus_20capucinus_20imitator_20[refseq_20GCF_5F001604975.1_202016- 04-04] 7,156 sequences; 2,717,703,182 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq526 398 9e-106 seq630 340 2e-88 seq28 246 4e-60 seq867 129 7e-25 seq2 129 7e-25 seq80 114 2e-20 seq57 111 2e-19 >seq526 Length=1402496 Score = 398 bits (440), Expect = 9e-106 Identities = 658/940 (70%), Gaps = 20/940 (2%) Strand=Plus/Plus Query 32957 TTTAAAAGTCAACATCTAAAGAAAAATGATTATCTTCTTGA---GACATAACTCCCATTT 33013 |||| || ||| || | || | |||| ||| ||| | || ||||| |||||||| Sbjct 113332 TTTAGAAATCAGCACCCAAGGTAAAAGAATTCTCTGTTGGACTTGACATCACTCCCATCC 113391 Query 33014 TTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTTT 33073 | || || || || || | || || || || ||||| |||||||||| ||| ||||| | Sbjct 113392 TCTGATACTCGCCTACTCTCTTCTCAAAGAAGTTAGTCTTTCCTTCCAGTGAAATATTCT 113451 Query 33074 CCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATCA 33133 |||| || ||||| ||||| | | ||| || |||| |||| ||| || Sbjct 113452 CCATAAAGTCAAATGGATTCTCTATTCTGAAAACCTTGCTAAAACCCAGTTCCAGCATG- 113510 Query 33134 ATCTATCCGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTT 33193 ||| || || || || || || ||| ||||| | |||||||| || || || | Sbjct 113511 -TCTGTCTGCCACAAACTCAATGTATTGCTTCATTAGAGTGCAATTCATCCCAATGAGCT 113569 Query 33194 TAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTA-TAATA 33252 || || | ||| |||||||||| |||||||| || || |||| || || | || Sbjct 113570 CCACAGGCAAGGCCTCAGTAAGAAACTCTTGTTCTATCCGAACAGCAT-TGATAGTTATT 113628 Query 33253 GATCTAACGGTTTCTTCACTCGGTGGATGCAATAAATGTTTAAACATCAAACATGCGAAA 33312 ||| || | || || ||| || | || ||||| ||||||| || || ||| Sbjct 113629 TCTCTTACTCTCTCCTCTGATGGTTTGTGTACTAGGTGTTTGAACATCAGGCAAGCAAAA 113688 Query 33313 TCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATT 33372 | |||| | |||||| ||||| |||| || || | ||||| ||||| || ||||| Sbjct 113689 TGTGAGTGTAAACCCTCATCTCTGCTAAAAAGGTCATGAGAAAATGTGAGGCCAGGCATC 113748 Query 33373 AGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTTCT 33432 || || | || || ||||| |||||||| || || || ||||||||| |||| ||||| Sbjct 113749 AGTCCTCATTTCTTGAGCCAGAATATGGATGCAAAAGAACCAGAAAAGTAGATGCCTTCC 113808 Query 33433 ACTGCAGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCGCTGTCATGTATCCACTTT 33489 |||||||||||||| | || | || ||||| | | | |||| ||||| Sbjct 113809 ACTGCAGCAAAGGCTACAACGCGTTCACCATAGGTAGCCTCTTTGTCCCCAATCCAGCGC 113868 Query 33490 TGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAG 33549 |||||||| |||||||| || ||||||||||||||||| |||||||| |||||| | Sbjct 113869 AAGGCCCAATCTGCCTTCTTGTTGACACAAGGCATCGTTTCAATGGCATTGAAGAGAAAT 113928 Query 33550 tttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGA 33609 | ||||||| |||||| | ||||| ||||| | |||| ||||||||| ||||| Sbjct 113929 TCCCTTTCATTGGGATCTTTTATGTAAGTGTCGATAAGGAGACCATACATTTCAGAATGT 113988 Query 33610 ATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCC-TCGGTAATCTGTACTTC 33668 |||||||| ||||| || || || || |||||||| | |||| || |||||||| | ||| Sbjct 113989 ATGTTTTCCATGGCAATTTGGAAGCCATAGAAACAGC-AGCCTTCTGTAATCTGAAGTTC 114047 Query 33669 TGTACAAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGC 33728 | | |||||| ||| |||| |||||||| ||||| || ||||| ||||||| || || Sbjct 114048 TTGGCTAAATCGCTCCACCAAGTTTTCATTTACTATGCCATCACTTGCTGCAAGGAAAGC 114107 Query 33729 CAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTG----A 33784 || || || |||||| ||| | || || || | || ||||| || || | Sbjct 114108 CAGAACGTGAGATATAAAGTATCTCTCCTCAGGCTTCAG-GGATTCC---CAGTGCCGTA 114163 Query 33785 TATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACA 33844 | || || || | ||||| || || | |||| || || || || ||||| |||| || Sbjct 114164 TGTCCTTGGACAGGTCTACCTCCTCAGCGCTCCAGAAGGAGGCGTCCGCCTTCTTATGCA 114223 Query 33845 TGTTCCAGATGTCATAATATTGGATTGGGAAAATAACAAA 33884 | | |||||||| | || | ||| |||||||| ||||| Sbjct 114224 TCTGCCAGATGTTGTGGTACTCGATGGGGAAAATGACAAA 114263 >seq630 Length=879232 Score = 340 bits (376), Expect = 2e-88 Identities = 550/782 (70%), Gaps = 27/782 (3%) Strand=Plus/Plus Query 32957 TTTAAAAGTCAACATCTAAAGAAAAATGATTATCTTCTTGA---GACATAACTCCCATTT 33013 |||| |||||| |||| || |||| ||| ||| || |||| |||||||| Sbjct 417478 TTTAGAAGTCAGCATCCAAGATAAAAGAATTCTCTGTGGGACTTGACACCACTCCCATCC 417537 Query 33014 TTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTTT 33073 | | | ||||| || | || || || || ||| | |||||||||| || ||||| | Sbjct 417538 TCTAATGCTCACCTACTCTCTTCTCAAAGAAGTTAATCTTTCCTTCCAGTGGAATATTCT 417597 Query 33074 CCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATCA 33133 |||| || ||||| ||||| || | ||| || |||| |||| ||| || | Sbjct 417598 CCATAAAGTCAAATGGATTCTCTACTCTGAAAACCTTGCTAAAACCCAGTTCCAGCATAA 417657 Query 33134 ATCTATCCGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTT 33193 ||| || || || || || || ||| ||||| | |||||||| || || || | Sbjct 417658 GTCTGTCTGCCACAAACTCAATGTATTGCTTCATTAGAGTGCAATTCATCCCAATGAGCT 417717 Query 33194 TAACTGG-AAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAATA 33252 | || || |||| | |||| || || || ||||| || || |||| | ||||| Sbjct 417718 TCACAGGCAAGATCT-CAGTGAGGAACTCCTGTTCTATCCGAACAGCAT---TGATAATT 417773 Query 33253 GATCTAACGGTTTCTTCA--CTCGG-TGGAT---GCAATAAATGTTTAAACATCAAACAT 33306 || | | ||||| | ||| | ||| | | | || |||| ||||||| || Sbjct 417774 -ATTTCTC--TTTCTCCCGGCTCTGATGGTTTGTGTACTAGGTGTTGGAACATCAGGCAA 417830 Query 33307 GCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCG 33366 || ||||| ||||| | |||||| ||||| |||| ||||| || ||||| ||||| || Sbjct 417831 GCAAAATCACAGTGTAAACCCTCATCTCTGCTAAAAAGTTCATTAGAAAATGTGAGGCCA 417890 Query 33367 GGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATT 33426 ||||| || || || || |||||||| ||||||||||| || || ||||||||||||| Sbjct 417891 GGCATCAGTCCTCGTTTCTTAAGCCAGAATATGGAAGCTAAAGAACCAGAAAAGAAGACG 417950 Query 33427 CCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCGCTGTCATGTATC 33483 ||||| ||||||||||||||| | || ||||| | | | |||| ||| Sbjct 417951 CCTTCCACTGCAGCAAAGGCAGT-------TCACCATAGGTAGCCTCTTTGTCCCCAATC 418003 Query 33484 CACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAG 33543 || |||| || |||||||| || ||||||||||||||||| |||||||| ||| Sbjct 418004 CAGCGCAAGGCCCGGTCTGCCTTCTTCTTGACACAAGGCATCGTTTCAATGGCATTGAAG 418063 Query 33544 AGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCC 33603 ||| | | |||| | |||||| | ||| || || | | |||||||||||||| Sbjct 418064 AGAAATTCCCTTTCGCTGGGATCTTTTATATACGTGTCAGTAAGGAGACTATACATTTCA 418123 Query 33604 GAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGT 33663 ||||| ||||| || ||| | || || ||||| |||||||| | ||||| |||||||| Sbjct 418124 GAATGTATGTTGTCCATGCCAATTTGGAATCCATAGAAACAGCGGGCCTCTGTAATCTGA 418183 Query 33664 ACTTCTGTACAAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAA 33723 |||||| | |||||| ||| |||| |||||||| ||||| |||||||| |||||||| Sbjct 418184 ACTTCTTGGCTAAATCGCTCCACCAAGTTTTCATTTACTATGCCGTCACTTGCTGCAAAG 418243 Query 33724 AA 33725 || Sbjct 418244 AA 418245 >seq28 Length=17023488 Score = 246 bits (272), Expect = 4e-60 Identities = 545/810 (67%), Gaps = 12/810 (1%) Strand=Plus/Minus Query 63218 TCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTC 63277 || |||||| |||||| | | |||||||||||| ||| |||||||||| | ||||| Sbjct 16623679 TCATTTCATGAAGAGAGCTGCAATCCAAAGAGC---AAAAAGATCTCTGGCACGCTGTTC 16623623 Query 63278 CTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTC 63337 || ||| || ||||||| || | ||| | ||| | | || || ||||||| || || Sbjct 16623622 TTCCTTTTCTATATTCTTCTTTAAATCAAAGAATTCAAAGATGTCTAAATGCCAAGGCTC 16623563 Query 63338 CAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCT-GATCTATGTATCTAGCGG 63396 || ||| || || | ||||||| | ||||| ||| ||| |||| | |||| ||| | Sbjct 16623562 CAGGTAAATAGCAAATGCTCCAGGACACTTGTT-CCTACCTCGATCCAGATATCAAGCTG 16623504 Query 63397 TGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGA 63456 |||| ||||| ||||||| ||| | | || || || || | ||||| || | | | Sbjct 16623503 TGTTGTTATATACTCTCAGCATCAGTACAAGGCCATTGGAATTGCCATTCGTCTCAGCAA 16623444 Query 63457 TATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAG 63516 | ||||| ||| | || | |||| ||| | | | ||| ||||| || | ||||| Sbjct 16623443 TGTAGCTGCCAGTAGCCCAAATACAACTCACAGCAACACCAATTCCTCCACCAGATTTAG 16623384 Query 63517 AGATTAATGCGCATCGTTTTAACGTGTCATAGATACCCTCTATGCTATCATCGATCATGT 63576 | || ||||| || | |||| |||||||| || || || ||||| |||| |||| Sbjct 16623383 AAATCAATGCATATTGCTTTAGAGTGTCATAAATGCCTTCAATGCTGTCATATTTCATAC 16623324 Query 63577 TAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAG 63636 | || |||||||||||||| | ||| | | | || || || | || | || || | Sbjct 16623323 TCAGAAGAAAACAGCTAGAAAGTTGTGGGCAGTTGGTACCAACACTGAAGAGAGTTGGTG 16623264 Query 63637 AAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGT---ACGTCTCAATAGCTGAGTCTA 63693 |||| || |||||| | | |||| ||| ||||||| || ||||| ||| || | Sbjct 16623263 AAGCATGAGTAAACTACCTCTCAGGAAGAAGATTGTCTGCTGTTTCAATTGCTACATCAA 16623204 Query 63694 TATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGA 63753 | || || || ||||| || | | | ||| ||||| ||| | ||| ||||| | | Sbjct 16623203 TGTCTTCTTTGTGGATTCCAACAGATGCTCTCATCAACATATGCCGTGGTATTTCAGCCA 16623144 Query 63754 TCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGT 63813 || || ||||||||||| || || || | ||||||||||| || |||| Sbjct 16623143 CTTTTCCATTGATTTTCAACAAATAAGACCACTCTAGCAACTTAAAACCAAAGTAATTGT 16623084 Query 63814 ATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTA 63873 | || || ||| | || | |||| | | || || | | ||| |||| ||| | Sbjct 16623083 AAGAGAAATCTTGGTCACAGATAACAGCAGAATTCAAGTGATCTTTATTGGCCAAAACAA 16623024 Query 63874 TATCCA-TGGTGATACTT-GAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATA 63931 |||||| || || |||| | | || ||||| | ||| |||| | ||| | | | Sbjct 16623023 TATCCAGTGCTG--ACTTGGCCACCATGGGAGAGTATTTGTCATTATGTGGACTTATGCA 16622966 Query 63932 GTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGA 63991 ||| | | || |||||||| ||||| || | || |||||||| ||||| | || || Sbjct 16622965 GTTATACAGGTCTTCCATCACATCACTGAACACTTCATTTGTTTCTTTGTGCAAGTTAGA 16622906 Query 63992 TACGGCTATTCTGGCGGCTAGAATGGCATA 64021 || || | || || || || || ||||| Sbjct 16622905 GACAGCAGTCCTAGCTGCCAGGATAGCATA 16622876 >seq867 Length=266704 Score = 129 bits (142), Expect = 7e-25 Identities = 258/382 (68%), Gaps = 3/382 (1%) Strand=Plus/Minus Query 32957 TTTAAAAGTCAACATCTAAAGAAAAATGATTATCTTCTTGA---GACATAACTCCCATTT 33013 |||| |||||| |||| || | ||||| ||| ||| | || ||||| |||||||| Sbjct 180931 TTTAGAAGTCAGCATCCAAGGTAAAATAATTCTCTGTTGGACTTGACATCACTCCCATCC 180872 Query 33014 TTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTTT 33073 | || || ||||| || | ||||| || || ||||| |||||||||| ||| ||||| | Sbjct 180871 TCTGATACTCACCTACTCTCTTTTCAAAGAAGTTAGTCTTTCCTTCCAGTGAAATATTCT 180812 Query 33074 CCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATCA 33133 |||| || ||||| ||||| || | ||| || |||| ||| |||| || | Sbjct 180811 CCATAAAGTCAAATGGATTCTCTACTCTGAAAACCTTGCTAAAACCCGATTCCAGCATAA 180752 Query 33134 ATCTATCCGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTT 33193 |||||| || || || || || ||| ||||| | ||||||||||| || || | Sbjct 180751 GTCTATCTGCCACAAACTCAATGTATTGCTTCATTAGAGTGCAATTCATTCCGATGAGCT 180692 Query 33194 TAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAATAG 33253 | || || ||| |||| || || || ||||| || || |||| | || || Sbjct 180691 TCACAGGCGAGGCCTCAGTGAGGAACTCCTGTTCTATCCGAACAGCATTGATAATTATTT 180632 Query 33254 ATCTAACGGTTTCTTCACTCGGTGGATGCAATAAATGTTTAAACATCAAACATGCGAAAT 33313 ||| || | || || ||| || | || |||||| |||| || || | |||| Sbjct 180631 CTCTTACTCTCTCCTCTGATGGTTTGTGTACTAGATGTTTGAACAACAGGCAAACAAAAT 180572 Query 33314 CGCAGTGCAGACCCTCGTCTCT 33335 | ||||| | |||| ||||| Sbjct 180571 CACAGTGTAAACCCGATTCTCT 180550 >seq2 Length=18007423 Score = 129 bits (142), Expect = 7e-25 Identities = 101/121 (83%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 33326 CCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 33385 |||| ||||| ||||| ||||| || ||||| ||||| || ||||| || || || || | Sbjct 1941489 CCTCATCTCTGCTAATAAGTTCATTAGAAAATGTGAGGCCAGGCATCAGTCCTCGTTTCT 1941430 Query 33386 TAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTTCTACTGCAGCAAAGG 33445 | ||||| |||||||| || || || |||||||||||||| ||||||||||||||||||| Sbjct 1941429 TGAGCCAGAATATGGATGCAAAAGAACCAGAAAAGAAGATGCCTTCTACTGCAGCAAAGG 1941370 Query 33446 C 33446 | Sbjct 1941369 C 1941369 Score = 98.7 bits (108), Expect = 1e-15 Identities = 96/124 (77%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 33564 ATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGC 33623 |||||| | ||||| || || | |||||||||||||| ||||| |||||||| ||||| Sbjct 1939021 ATCTTTTATGTAAGTGTCAATAAGGAGACTATACATTTCAGAATGTATGTTTTCCATGGC 1938962 Query 33624 CATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTC 33683 || || || || |||||||| | || || |||||||| |||||| | |||||| || Sbjct 1938961 AATTTGGAAACCATAGAAACAGCGGGCTTCTGTAATCTGAACTTCTTGGCTAAATCGCTC 1938902 Query 33684 CGCC 33687 | || Sbjct 1938901 CACC 1938898 >seq80 Length=8459403 Score = 114 bits (126), Expect = 2e-20 Identities = 108/138 (78%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 63212 CTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCT 63271 || |||||||||||| |||||||| |||||||||||||| | ||| |||||||||| | Sbjct 1289062 CTCCACTCGTTTCATGAAGAGATCCGGAATCCAAAGAGCAAAAAAAAGATCTCTGGCACG 1289121 Query 63272 ATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCA 63331 ||||| || |||||||| ||||| || | ||| ||||| | | || || ||||||| Sbjct 1289122 CTGTTCTTCCTTTCCTGTGTTCTTCTTTAAATCCAGGAATTCAAAGATGTCTAAATGCCA 1289181 Query 63332 CGGTTCCAAGTATATGGC 63349 || |||| ||| || || Sbjct 1289182 AGGCTCCAGGTAAATAGC 1289199 Score = 111 bits (122), Expect = 2e-19 Identities = 127/171 (74%), Gaps = 0/171 (0%) Strand=Plus/Plus Query 62062 TCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATAT 62121 |||| ||||| || |||||||| || |||||| ||| | || || || || ||||| | Sbjct 1275313 TCCAGCCGTAGAAGTGCATACTAGTGAGTTTGCCATAGTTAGGCTCAGCAATGTGGATGT 1275372 Query 62122 TCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCT 62181 ||| ||| || |||||||| ||||| || || || || |||||||| || | | || | Sbjct 1275373 TCAAAGACTGGCTTTGATCAATGAAAGCACCTCTCTCAGCAGCCATCTTGAGAACAGTTT 1275432 Query 62182 TTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAA 62232 | || | |||||||| | ||||||||||| | |||| | || || |||| Sbjct 1275433 TCTGAGAGATTTCCCACACAGTTTTATAAAGTTGCTTCAGGTCATCAGGAA 1275483 Score = 107 bits (118), Expect = 2e-18 Identities = 106/137 (77%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 62337 ACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACC 62396 || ||||||||||| ||||| ||||| ||||| || || || ||||| || ||||| | Sbjct 1278101 ACCTGAAATTCTCCTGACAAGACTCTGCGAGTATAGATGTTGCTGGTGTAAGGTTCAATA 1278160 Query 62397 GACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAA 62456 ||||||||||| |||| || |||||||| || || || ||||| || || | | |||| Sbjct 1278161 GACTCATTATTCCCCAGGATCTGAGCAGTGGAAGCTGTAGGCATCGGGGCAATAAGTAAA 1278220 Query 62457 CTATTTCTAAGACCGTA 62473 || ||||| | ||| || Sbjct 1278221 CTGTTTCTTATACCATA 1278237 Score = 95.1 bits (104), Expect = 2e-14 Identities = 135/190 (71%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 62575 CATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGT 62634 |||| || || |||||||| | || || ||| || ||||| || || || || || |||| Sbjct 1283222 CATAGGTTTCATATGGTCCATGCTCCTTAGCAAGGTCACAGCTGGCTTCCAAGGCTCCGT 1283281 Query 62635 AATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGAT 62694 ||||||| ||||| ||||||| |||||| | || ||||| || ||||| || | Sbjct 1283282 AATAAATAGTTTCAAAGATCTGCTTATTCAATAGCTGGGCTTCTGCACTCTCAAAAGGGT 1283341 Query 62695 AATTTAAGAGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTC 62754 | | | || ||||| || || || | ||||| || ||||| || || || | ||| | Sbjct 1283342 ATCTCATCAGGATAAAAGCATCTGCCAGACCTTGTACCCCAATTCCAATGGGGCGATGAC 1283401 Query 62755 TCTTATTAGA 62764 ||||| || Sbjct 1283402 GTTTATTTGA 1283411 >seq57 Length=8566406 Score = 111 bits (122), Expect = 2e-19 Identities = 96/119 (81%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 33328 TCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTA 33387 || ||||| || || ||||| ||||||||||||||||| ||||| || || | ||| || Sbjct 1418657 TCATCTCTGCTGATGAGTTCATTGGAAAACGTGAGTCCTGGCATAAGACCTCTCTTCTTT 1418716 Query 33388 AGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTTCTACTGCAGCAAAGGC 33446 ||||| ||||| | ||| || ||||| || ||||| | ||||||||| ||||| ||||| Sbjct 1418717 AGCCAGAATATAGCAGCAAAAGATCCTGAGAAGAAAACTCCTTCTACAGCAGCGAAGGC 1418775 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622891477372960