Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cebus_20capucinus_20imitator_20[refseq_20GCF_5F001604975.1_202016-
04-04] 7,156 sequences; 2,717,703,182 total letters
Query= NC_007151.1
Length=149622
Score E
Sequences producing significant alignments: (Bits) Value
seq25 96.9 3e-15
seq434 87.8 2e-12
seq93 84.2 2e-11
>seq25
Length=15232693
Score = 96.9 bits (106), Expect = 3e-15
Identities = 105/136 (77%), Gaps = 4/136 (3%)
Strand=Plus/Minus
Query 26862 GACAAAGAAGGGATACCTCCCGATCAACAAAGACTCATTTACGGCGGCAAACAACTCGAA 26921
|| || ||||| || ||||| ||||| |||||||| || || | ||||| ||||| |||
Sbjct 12145374 GATAAGGAAGGAATTCCTCCTGATCAGCAAAGACTGATCTATGCTGGCAAGCAACTAGAA 12145315
Query 26922 GATG-ATAGAAAC-GTCAGCGACTATAACATTCAAAAAGAATCTACTATCCATCTGGTCC 26979
|||| || | | ||| | |||| ||||||||||| || |||||| | |||||||| |
Sbjct 12145314 GATGGATGTACTCTGTCTG--ACTACAACATTCAAAAGGAGTCTACTCTTCATCTGGTGC 12145257
Query 26980 TGAGACTTAGAGGAGG 26995
|||||||| | || ||
Sbjct 12145256 TGAGACTTCGTGGTGG 12145241
>seq434
Length=1819716
Score = 87.8 bits (96), Expect = 2e-12
Identities = 158/231 (68%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 26765 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATC 26824
||||||||| | || || ||||| | || || || | |||||| |||| | ||| |
Sbjct 1331512 CAAAATGCAGATTTTCGTGAAAACCCTTACAGGGAAGACCATCACCCTCGAGGTTGAACC 1331453
Query 26825 AAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGA 26884
|| || || || | || || ||||| || || ||||| || ||||| ||
Sbjct 1331452 CTCGGATACGATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGA 1331393
Query 26885 TCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTA 26944
||| |||||||| || | | ||||| ||||| ||||||| | | | |||||
Sbjct 1331392 TCAGCAAAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTA 1331333
Query 26945 TAACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995
||||||||| || || |||||| | ||||| || |||||||| | || ||
Sbjct 1331332 TAACATTCAGAAGGAGTCTACTCTTCATCTTGTGTTGAGACTTCGTGGTGG 1331282
>seq93
Length=13160294
Score = 84.2 bits (92), Expect = 2e-11
Identities = 94/126 (75%), Gaps = 0/126 (0%)
Strand=Plus/Minus
Query 26862 GACAAAGAAGGGATACCTCCCGATCAACAAAGACTCATTTACGGCGGCAAACAACTCGAA 26921
|| || ||||| || ||||| ||||| |||||||| || | | ||||| ||||| |||
Sbjct 4738477 GATAAGGAAGGAATTCCTCCTGATCAGCAAAGACTGATCTTTGCTGGCAAGCAACTGGAA 4738418
Query 26922 GATGATAGAAACGTCAGCGACTATAACATTCAAAAAGAATCTACTATCCATCTGGTCCTG 26981
|||| | | | | ||||| ||||||||||| || |||||| | ||||| || ||
Sbjct 4738417 GATGGTTGTACTTTGCCTGACTACAACATTCAAAAGGAGTCTACTCTTCATCTTGTGTTG 4738358
Query 26982 AGACTT 26987
||||||
Sbjct 4738357 AGACTT 4738352
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478619583648320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |