Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cebus_20capucinus_20imitator_20[refseq_20GCF_5F001604975.1_202016-
04-04] 7,156 sequences; 2,717,703,182 total letters
Query= NC_007767.1
Length=132959
Score E
Sequences producing significant alignments: (Bits) Value
seq4 113 4e-20
seq573 104 2e-17
seq434 104 2e-17
seq72 104 2e-17
seq290 102 7e-17
seq181 100 2e-16
seq69 100 2e-16
seq25 98.7 8e-16
seq292 89.7 4e-13
seq118 87.8 2e-12
seq93 87.8 2e-12
seq53 87.8 2e-12
seq34 87.8 2e-12
seq64 84.2 2e-11
seq83 82.4 6e-11
seq19 82.4 6e-11
>seq4
Length=15321207
Score = 113 bits (124), Expect = 4e-20
Identities = 163/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 115283 AAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCC 115342
|||||||| ||||| || ||||| || ||||| || ||||| ||| |||| || ||
Sbjct 5242993 AAAATGCAGATTTTCGTGAAAACCCTTACGGGGAAGACCATAACCCTCGAGGTTGAACCC 5243052
Query 115343 AGCGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGAT 115402
|| || | | | | ||||| ||||| ||||| ||||| | || ||||
Sbjct 5243053 TCGGAAACGATAGAAAATGTAAAGGCCAAAATCCAGGATAAGGAAGGAATTCCTCCTGAT 5243112
Query 115403 CAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTAT 115462
||||||||||| || | ||| ||||| ||| | ||||||| || || | || ||
Sbjct 5243113 CAGCAAAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTAC 5243172
Query 115463 AACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512
|||||||| || ||||||||| | ||| | ||||||||||| || || ||
Sbjct 5243173 AACATTCAGAAGGAGTCTACTCTTCATCTTGTGTTGAGATTTCGTGGTGG 5243222
>seq573
Length=1150292
Score = 104 bits (114), Expect = 2e-17
Identities = 161/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 115283 AAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCC 115342
|||||||| ||||| || ||||| || ||||| || ||||| ||| |||| || ||
Sbjct 200699 AAAATGCAGATTTTCGTGAAAACCCTTACGGGGAAGACCATCACCCTCGAGGTTGAACCC 200640
Query 115343 AGCGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGAT 115402
|| || | | | | ||||| || || ||||| ||||| | || ||||
Sbjct 200639 TCGGATACGATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGAT 200580
Query 115403 CAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTAT 115462
||||||||||| || | ||| ||||| ||| | ||||||| || || | || ||
Sbjct 200579 CAGCAAAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTAC 200520
Query 115463 AACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512
|||||||| || ||||||||| | ||| | ||||||||| | || || ||
Sbjct 200519 AACATTCAGAAGGAGTCTACTCTTCATCTTGTGTTGAGACTTCGTGGTGG 200470
>seq434
Length=1819716
Score = 104 bits (114), Expect = 2e-17
Identities = 161/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 115283 AAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCC 115342
|||||||| ||||| || ||||| || || || || ||||| ||| |||| || ||
Sbjct 1331511 AAAATGCAGATTTTCGTGAAAACCCTTACAGGGAAGACCATCACCCTCGAGGTTGAACCC 1331452
Query 115343 AGCGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGAT 115402
|| || | | | | ||||| || || ||||| ||||| | || ||||
Sbjct 1331451 TCGGATACGATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGAT 1331392
Query 115403 CAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTAT 115462
||||||||||| || | ||| ||||| ||| | ||||||| || || | || |||
Sbjct 1331391 CAGCAAAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTAT 1331332
Query 115463 AACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512
|||||||| || ||||||||| | ||| | ||||||||| | || || ||
Sbjct 1331331 AACATTCAGAAGGAGTCTACTCTTCATCTTGTGTTGAGACTTCGTGGTGG 1331282
>seq72
Length=7750101
Score = 104 bits (114), Expect = 2e-17
Identities = 158/224 (71%), Gaps = 1/224 (0%)
Strand=Plus/Minus
Query 115283 AAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAA-ACCATTACCGTCGAAACGGAGTC 115341
|||||||| |||||||| ||||| || ||||| ||| ||||||||| |||| || |
Sbjct 2356206 AAAATGCAGATTTTTGTGAAAACTCTTACGGGGAAAGACCATTACCCTCGAGGTTGAACC 2356147
Query 115342 CAGCGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGA 115401
| || || | | | | ||||| ||||| ||||| ||||| | || |||
Sbjct 2356146 CTCGGATACGATAGAAAATGTAAAGGCCAAAATCCAGGATAAGGAAGGAATTCCTCCTGA 2356087
Query 115402 TCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTA 115461
|||||||||||| || | ||| ||||| | | ||||||| || | | || ||
Sbjct 2356086 TCAGCAAAGACTGATCTTTGCTGGCAAGACACTGGAAGATGGACGCACTTTATCTGACTA 2356027
Query 115462 TAACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGC 115505
|||||||| || ||||||||| | ||| | ||||||||| |||
Sbjct 2356026 CAACATTCAGAAGGAGTCTACTCTTCATCTTGTGTTGAGACTGC 2355983
>seq290
Length=2922102
Score = 102 bits (112), Expect = 7e-17
Identities = 160/229 (70%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 115284 AAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCA 115343
||||||| |||||||| ||||| || | ||| || ||||| ||| |||| | || |
Sbjct 1757769 AAATGCAGATTTTTGTGAAAACCCTTATGGGGAAGACCATCACCCTCGAGGCTGAACCTT 1757710
Query 115344 GCGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATC 115403
|| || | | | | ||||| || || ||||||||||| | || |||||
Sbjct 1757709 CGGATACGATAGAAAATGTAAAGTCCAAGATCCAGGATAAAGAAGGAATTCCTTGTGATC 1757650
Query 115404 AGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATA 115463
||||||| || || | ||| ||||| ||| | ||||||| || || | || || |
Sbjct 1757649 AGCAAAGGCTGATCTTTGCTGGCAAGCAACTGGAAGATGGATGTACTTTGTCTGACTACA 1757590
Query 115464 ACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512
|||||||||| ||||||| | | ||| | ||||||||| | || || ||
Sbjct 1757589 ACATTCAAAAGGAGTCTATTCTTCATCTTGTGTTGAGACTTCGTGGTGG 1757541
>seq181
Length=4179193
Score = 100 bits (110), Expect = 2e-16
Identities = 163/234 (70%), Gaps = 8/234 (3%)
Strand=Plus/Minus
Query 115283 AAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCC 115342
|||||||| ||||| || ||||| || ||||| || ||||| ||| |||| || ||
Sbjct 2580696 AAAATGCAGATTTTCGTGAAAACCCTTACGGGGAAGACCATCACCCTCGAGGTTGAACCC 2580637
Query 115343 AGCGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGG----CGTCCCCGT 115398
|| || | | | | ||||| || || ||||| ||||| |||||
Sbjct 2580636 TCGGATACGATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCGTCC---- 2580581
Query 115399 TGATCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGA 115458
||||||||||||||| || | ||| ||||| ||| | ||||||| || || | ||
Sbjct 2580580 TGATCAGCAAAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGA 2580521
Query 115459 TTATAACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512
|| |||||||| || ||||||||| | ||| | ||||||||| | || || ||
Sbjct 2580520 CTACAACATTCAGAAGGAGTCTACTCTTCATCTTGTGTTGAGACTTCGTGGTGG 2580467
>seq69
Length=11786368
Score = 100 bits (110), Expect = 2e-16
Identities = 160/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 115283 AAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCC 115342
|||||||| ||||| || ||||| || || || || ||||| | | |||| || ||
Sbjct 9297008 AAAATGCAGATTTTCGTGAAAACCCTTACAGGGAAGACCATCAACCTCGAGGTTGAACCC 9297067
Query 115343 AGCGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGAT 115402
|| ||| | | | ||||| || || ||||| |||||| | || ||||
Sbjct 9297068 TTGGATACTACAGAAAATGTAAAGGCCAAGATCCAAGATAAGGAAGGCATTCCTCCTGAT 9297127
Query 115403 CAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTAT 115462
||||||||||| || | ||| ||||| ||| | ||||||| || || | || ||
Sbjct 9297128 CAGCAAAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGAGGTACTTTGTCTGACTAC 9297187
Query 115463 AACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512
|||||||| || ||||||||| | ||| | ||||||||| | || || ||
Sbjct 9297188 AACATTCAGAAGGAGTCTACTCTTCATCTTGTGTTGAGACTTCGTGGTGG 9297237
>seq25
Length=15232693
Score = 98.7 bits (108), Expect = 8e-16
Identities = 102/134 (76%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 115379 GATAAAGAAGGCGTCCCCGTTGATCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAA 115438
||||| ||||| | || ||||||||||||||| || ||||| ||||| ||| |||||
Sbjct 12145374 GATAAGGAAGGAATTCCTCCTGATCAGCAAAGACTGATCTATGCTGGCAAGCAACTAGAA 12145315
Query 115439 GATGACAAAACCATGGCCGATTATAACATTCAAAAAGAGTCTACTATACATATGGTGTTG 115498
|||| || || | || || ||||||||||| ||||||||| | ||| ||||| ||
Sbjct 12145314 GATGGATGTACTCTGTCTGACTACAACATTCAAAAGGAGTCTACTCTTCATCTGGTGCTG 12145255
Query 115499 AGATTGCGAGGAGG 115512
||| | || || ||
Sbjct 12145254 AGACTTCGTGGTGG 12145241
>seq292
Length=4239571
Score = 89.7 bits (98), Expect = 4e-13
Identities = 151/219 (69%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 115283 AAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCC 115342
|||||||| ||||| || ||||| || ||||| || ||||| ||| |||| || ||
Sbjct 2944190 AAAATGCAGATTTTCGTGAAAACCCTTACGGGGAAGACCATCACCCTCGAGGTTGAACCC 2944131
Query 115343 AGCGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGAT 115402
|| || | | | | ||||| || || ||||| ||||| | || ||||
Sbjct 2944130 TCGGATACGATAGAAAATGTAAAGGTCAAGATCCAGGATAAGGAAGGAATTCCTCCTGAT 2944071
Query 115403 CAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTAT 115462
||||||||||| || | ||| ||||| || | ||| ||| || || | || ||
Sbjct 2944070 CAGCAAAGACTGATCTTTGCTGGCAAGGAACTGGAATATGGACGCACTTTGTCTGACTAC 2944011
Query 115463 AACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGA 115501
|| ||||| || ||||||||| | ||| | |||||||||
Sbjct 2944010 AATATTCAGAAGGAGTCTACTCTTCATCTTGTGTTGAGA 2943972
>seq118
Length=10303814
Score = 87.8 bits (96), Expect = 2e-12
Identities = 93/123 (76%), Gaps = 0/123 (0%)
Strand=Plus/Minus
Query 115379 GATAAAGAAGGCGTCCCCGTTGATCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAA 115438
||||||||||| || || ||||||| ||||||| |||| ||| ||||| ||| | |||
Sbjct 8799420 GATAAAGAAGGAGTTCCTCCTGATCAGTAAAGACTGATTTTTGCTGGCAAGCAACTGGAA 8799361
Query 115439 GATGACAAAACCATGGCCGATTATAACATTCAAAAAGAGTCTACTATACATATGGTGTTG 115498
||| | || || | || | |||||||| || ||||||||| | ||| | ||||||
Sbjct 8799360 GATATGCATACTCTGCCTGACTGCAACATTCAGAAGGAGTCTACTCTTCATCTTGTGTTG 8799301
Query 115499 AGA 115501
|||
Sbjct 8799300 AGA 8799298
>seq93
Length=13160294
Score = 87.8 bits (96), Expect = 2e-12
Identities = 93/123 (76%), Gaps = 0/123 (0%)
Strand=Plus/Minus
Query 115379 GATAAAGAAGGCGTCCCCGTTGATCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAA 115438
||||| ||||| | || ||||||||||||||| || | ||| ||||| ||| | |||
Sbjct 4738477 GATAAGGAAGGAATTCCTCCTGATCAGCAAAGACTGATCTTTGCTGGCAAGCAACTGGAA 4738418
Query 115439 GATGACAAAACCATGGCCGATTATAACATTCAAAAAGAGTCTACTATACATATGGTGTTG 115498
|||| || || | || || ||||||||||| ||||||||| | ||| | ||||||
Sbjct 4738417 GATGGTTGTACTTTGCCTGACTACAACATTCAAAAGGAGTCTACTCTTCATCTTGTGTTG 4738358
Query 115499 AGA 115501
|||
Sbjct 4738357 AGA 4738355
>seq53
Length=8749341
Score = 87.8 bits (96), Expect = 2e-12
Identities = 150/218 (69%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 115283 AAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCC 115342
|||||||| |||||||| ||||| || || || || ||||| ||| |||| || ||
Sbjct 1284993 AAAATGCAGATTTTTGTGAAAACCCTTACAGGGAAGACCATCACCCTCGAGGTTGAAACC 1284934
Query 115343 AGCGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGAT 115402
|| || | | | | ||||| || || ||||| ||||| | | ||||
Sbjct 1284933 TTGGAAACGATAGAAGATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCTTCCTGAT 1284874
Query 115403 CAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTAT 115462
||||||||||| || | ||| |||| ||| | ||||||| || || | || ||
Sbjct 1284873 CAGCAAAGACTGATCTTTGCTGGCAGGCAACTGGAAGATGGACGTACTTTGTCTGACTAC 1284814
Query 115463 AACATTCAAAAAGAGTCTACTATACATATGGTGTTGAG 115500
| |||||| || ||||||||| | ||| | ||||||||
Sbjct 1284813 AGCATTCAGAAGGAGTCTACTCTTCATCTTGTGTTGAG 1284776
>seq34
Length=10557659
Score = 87.8 bits (96), Expect = 2e-12
Identities = 151/219 (69%), Gaps = 4/219 (2%)
Strand=Plus/Plus
Query 115283 AAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCC 115342
|||||||| |||||||| ||||| | || ||| || | ||| ||| |||| || |||
Sbjct 1465526 AAAATGCAGATTTTTGTGAAAACCCCCATGGGGAAGATCATCACCCTCGAGGTTGAATCC 1465585
Query 115343 AGCGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGAT 115402
|| || | | | | ||||| || || ||||| ||||| | || ||||
Sbjct 1465586 TCCGGTACGATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGAT 1465645
Query 115403 CAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTAT 115462
||| ||||||| || | ||| ||||| ||| | ||||||| | || || | ||
Sbjct 1465646 CAGGAAAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACATACTTTGAC----TAC 1465701
Query 115463 AACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGA 115501
||||||||||| ||||||| | | ||| | |||| ||||
Sbjct 1465702 AACATTCAAAAGGAGTCTAGTCTTCATCTTGTGTCGAGA 1465740
>seq64
Length=8039362
Score = 84.2 bits (92), Expect = 2e-11
Identities = 97/131 (74%), Gaps = 0/131 (0%)
Strand=Plus/Plus
Query 115379 GATAAAGAAGGCGTCCCCGTTGATCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAA 115438
||||| ||||| | || ||||||||||||||| || | ||| ||||| ||| | |||
Sbjct 5682384 GATAAGGAAGGAATTCCTCCTGATCAGCAAAGACTGATCTCTGCTGGCAAGCAACTGGAA 5682443
Query 115439 GATGACAAAACCATGGCCGATTATAACATTCAAAAAGAGTCTACTATACATATGGTGTTG 115498
|||| || || | || || |||||||| || ||||||||| | ||| | ||||||
Sbjct 5682444 GATGGACGTACTTTGTCTGACTACAACATTCAGAAGGAGTCTACTCTTCATCTTGTGTTG 5682503
Query 115499 AGATTGCGAGG 115509
||| | || ||
Sbjct 5682504 AGACTTCGTGG 5682514
>seq83
Length=10167762
Score = 82.4 bits (90), Expect = 6e-11
Identities = 92/123 (75%), Gaps = 0/123 (0%)
Strand=Plus/Minus
Query 115379 GATAAAGAAGGCGTCCCCGTTGATCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAA 115438
||||| ||||| |||| ||||||||||||||| || | ||| ||||| ||| | |||
Sbjct 3734430 GATAAGGAAGGAATCCCTCCTGATCAGCAAAGACTGATCTTTGCTGGCAAGCAACTGGAA 3734371
Query 115439 GATGACAAAACCATGGCCGATTATAACATTCAAAAAGAGTCTACTATACATATGGTGTTG 115498
|||| | | || | || || || |||||||| ||||||||| | ||| | |||||
Sbjct 3734370 GATGGACATATTTTGTCTGACTACAATATTCAAAAGGAGTCTACTCTTCATCTTGTGTTC 3734311
Query 115499 AGA 115501
|||
Sbjct 3734310 AGA 3734308
>seq19
Length=20362211
Score = 82.4 bits (90), Expect = 6e-11
Identities = 92/123 (75%), Gaps = 0/123 (0%)
Strand=Plus/Plus
Query 115379 GATAAAGAAGGCGTCCCCGTTGATCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAA 115438
||||||||||| | || ||||||||||||||| || | ||| ||||| ||| | |||
Sbjct 6160438 GATAAAGAAGGAATTCCTCCTGATCAGCAAAGACTGATCTTTGCTGGCAAGCAACTGGAA 6160497
Query 115439 GATGACAAAACCATGGCCGATTATAACATTCAAAAAGAGTCTACTATACATATGGTGTTG 115498
|| | || || | || || ||||||||||| |||| |||| | ||| | ||||||
Sbjct 6160498 GACGGACGTACTTTGTCTGACTACAACATTCAAAAGGAGTTTACTCTTCATCTTGTGTTG 6160557
Query 115499 AGA 115501
|||
Sbjct 6160558 AGA 6160560
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 425306904154720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |