Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cebus_20capucinus_20imitator_20[refseq_20GCF_5F001604975.1_202016-
04-04] 7,156 sequences; 2,717,703,182 total letters
Query= NC_008168.1
Length=104710
Score E
Sequences producing significant alignments: (Bits) Value
seq2543 136 3e-27
seq354 127 1e-24
seq4 114 9e-21
seq573 111 1e-19
seq101 109 4e-19
seq181 105 4e-18
seq3 105 4e-18
seq197 104 2e-17
seq434 102 5e-17
seq292 102 5e-17
seq552 100 2e-16
seq366 100 2e-16
seq290 100 2e-16
seq11 100 2e-16
seq69 96.9 2e-15
seq63 96.9 2e-15
seq19 96.9 2e-15
seq142 93.3 3e-14
seq83 91.5 1e-13
seq408 89.7 3e-13
seq26 89.7 3e-13
seq450 87.8 1e-12
seq327 87.8 1e-12
seq513 86.0 4e-12
seq877 84.2 1e-11
seq530 84.2 1e-11
seq302 82.4 5e-11
>seq2543
Length=8359
Score = 136 bits (150), Expect = 3e-27
Identities = 87/95 (92%), Gaps = 5/95 (5%)
Strand=Plus/Minus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
|||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 1801 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 1742
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
|||||| |||||||||||||| |||||||||||||
Sbjct 1741 TAATCCATTCATGCGCGTCACGAATTAGATGACGA 1707
Score = 116 bits (128), Expect = 2e-21
Identities = 72/77 (94%), Gaps = 0/77 (0%)
Strand=Plus/Minus
Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006
|||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||
Sbjct 8142 CTCTCTCTTCAAAGTTCTTTGCAACTTTCCCTCACGGTACTTGTTTGCTATCGGTCTCAT 8083
Query 20007 GGTAATATTTAGCCTTA 20023
||| |||||||||||||
Sbjct 8082 GGTCATATTTAGCCTTA 8066
>seq354
Length=2399762
Score = 127 bits (140), Expect = 1e-24
Identities = 85/95 (89%), Gaps = 5/95 (5%)
Strand=Plus/Minus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
||||||||||||||||||||||||||||| |||||||| ||||| || ||||||||
Sbjct 1047146 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTAGGTAGGGACAGTGGGAATCTCGT 1047087
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
| |||| ||||||||||||||||||||||||||||
Sbjct 1047086 TCATCCATTCATGCGCGTCACTAATTAGATGACGA 1047052
>seq4
Length=15321207
Score = 114 bits (126), Expect = 9e-21
Identities = 164/231 (71%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 38090 ACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGA 38149
|||||| | || | |||||| | ||||||||| |||||| ||||| ||||| |||||
Sbjct 5243223 ACCACCACGAAATCTCAACACAAGATGAAGAGTAGACTCCTTCTGAATGTTGTAGTCAGA 5243164
Query 38150 CAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGG 38209
|||| |||| | || || | ||| || || ||||| || || | ||| ||||| | ||
Sbjct 5243163 CAAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGG 5243104
Query 38210 GACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAAC 38269
| ||||| || ||| ||||| ||| ||||| | | || || ||||||
Sbjct 5243103 AATTCCTTCCTTATCCTGGATTTTGGCCTTTACATTTTCTATCGTTTCCGAGGGTTCAAC 5243044
Query 38270 TTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATGTT 38320
|| | || || || || ||||| | |||||||||||| |||||||| ||
Sbjct 5243043 CTCGAGGGTTATGGTCTTCCCCGTAAGGGTTTTCACGAAAATCTGCATTTT 5242993
>seq573
Length=1150292
Score = 111 bits (122), Expect = 1e-19
Identities = 154/216 (71%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 38105 CAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTC 38164
|||||| | ||||||||| |||||| ||||| ||||| ||||||||| |||| | ||
Sbjct 200484 CAACACAAGATGAAGAGTAGACTCCTTCTGAATGTTGTAGTCAGACAAAGTACGTCCATC 200543
Query 38165 GTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTC 38224
|| | ||| || || ||||| || || | ||| ||||| | || | ||||| || ||
Sbjct 200544 TTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATC 200603
Query 38225 CATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGT 38284
| || || ||| ||||| | | ||||| |||||| || | || || ||
Sbjct 200604 CTGGATCTTGGCCTTTACATTTTCTATCGTATCCGAGGGTTCAACCTCGAGGGTGATGGT 200663
Query 38285 TTTACCCGTCAAGGTTTTCACGAATATCTGCATGTT 38320
|| ||||| | |||||||||||| |||||||| ||
Sbjct 200664 CTTCCCCGTAAGGGTTTTCACGAAAATCTGCATTTT 200699
>seq101
Length=6472529
Score = 109 bits (120), Expect = 4e-19
Identities = 80/93 (86%), Gaps = 5/93 (5%)
Strand=Plus/Minus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
||||||||||||||||||||||||||||| |||||||| ||||| || ||||||||
Sbjct 3571047 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTAGGTAGGGACAGTGGGAATCTCGT 3570988
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGAC 25989
| |||| || ||| | |||||||||||||||||
Sbjct 3570987 TCATCCATTTATGTGTGTCACTAATTAGATGAC 3570955
>seq181
Length=4179193
Score = 105 bits (116), Expect = 4e-18
Identities = 153/216 (71%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 38105 CAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTC 38164
|||||| | ||||||||| |||||| ||||| ||||| ||||||||| |||| | ||
Sbjct 2580481 CAACACAAGATGAAGAGTAGACTCCTTCTGAATGTTGTAGTCAGACAAAGTACGTCCATC 2580540
Query 38165 GTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTC 38224
|| | ||| || || ||||| || || | ||| ||||| | | | ||||| || ||
Sbjct 2580541 TTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGACGAATTCCTTCCTTATC 2580600
Query 38225 CATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGT 38284
| || || ||| ||||| | | ||||| |||||| || | || || ||
Sbjct 2580601 CTGGATCTTGGCCTTTACATTTTCTATCGTATCCGAGGGTTCAACCTCGAGGGTGATGGT 2580660
Query 38285 TTTACCCGTCAAGGTTTTCACGAATATCTGCATGTT 38320
|| ||||| | |||||||||||| |||||||| ||
Sbjct 2580661 CTTCCCCGTAAGGGTTTTCACGAAAATCTGCATTTT 2580696
>seq3
Length=16812482
Score = 105 bits (116), Expect = 4e-18
Identities = 153/216 (71%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 38105 CAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTC 38164
|| ||| | ||||||||| |||||| ||||| ||||| ||||||||| |||| | ||
Sbjct 14706858 CAGCACAAGATGAAGAGTAGACTCCTTCTGAATGTTGTAGTCAGACAAAGTACGTCCATC 14706917
Query 38165 GTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTC 38224
|| | ||| || || ||||| || || | ||| ||||| | || | ||||| || ||
Sbjct 14706918 TTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATC 14706977
Query 38225 CATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGT 38284
| || || ||| ||||| | | ||||| |||||| || | || || ||
Sbjct 14706978 CTGGATCTTGGCCTTTACATTTTCTATCATATCTGAGGGTTCAACCTCGAGGGTGATGGT 14707037
Query 38285 TTTACCCGTCAAGGTTTTCACGAATATCTGCATGTT 38320
|| ||||| | |||||||||||| |||||||| ||
Sbjct 14707038 CTTCCCCGTAAGGGTTTTCACGAAAATCTGCATTTT 14707073
>seq197
Length=3949468
Score = 104 bits (114), Expect = 2e-17
Identities = 80/95 (84%), Gaps = 5/95 (5%)
Strand=Plus/Minus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
|||||| |||||||||||||||||||||| |||||||| ||||| || ||||| ||
Sbjct 3143144 AAGCCCATTCCCTTGGCTGTGGTTTCGCTGGATAGTAGGTAGGGACAGTGGGAATCTTGT 3143085
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
| |||| | ||||| |||||||||||||| |||||
Sbjct 3143084 TCATCCATACATGCACGTCACTAATTAGACGACGA 3143050
>seq434
Length=1819716
Score = 102 bits (112), Expect = 5e-17
Identities = 152/216 (70%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 38105 CAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTC 38164
|||||| | ||||||||| |||||| ||||| || || ||||||||| |||| | ||
Sbjct 1331296 CAACACAAGATGAAGAGTAGACTCCTTCTGAATGTTATAGTCAGACAAAGTACGTCCATC 1331355
Query 38165 GTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTC 38224
|| | ||| || || ||||| || || | ||| ||||| | || | ||||| || ||
Sbjct 1331356 TTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATC 1331415
Query 38225 CATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGT 38284
| || || ||| ||||| | | ||||| |||||| || | || || ||
Sbjct 1331416 CTGGATCTTGGCCTTTACATTTTCTATCGTATCCGAGGGTTCAACCTCGAGGGTGATGGT 1331475
Query 38285 TTTACCCGTCAAGGTTTTCACGAATATCTGCATGTT 38320
|| || || | |||||||||||| |||||||| ||
Sbjct 1331476 CTTCCCTGTAAGGGTTTTCACGAAAATCTGCATTTT 1331511
>seq292
Length=4239571
Score = 102 bits (112), Expect = 5e-17
Identities = 152/216 (70%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 38105 CAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTC 38164
|||||| | ||||||||| |||||| ||||||||||| ||||||||| ||| | |
Sbjct 2943975 CAACACAAGATGAAGAGTAGACTCCTTCTGAATATTGTAGTCAGACAAAGTGCGTCCATA 2944034
Query 38165 GTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTC 38224
|| | || || || ||||| || || | ||| ||||| | || | ||||| || ||
Sbjct 2944035 TTCCAGTTCCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATC 2944094
Query 38225 CATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGT 38284
| || || ||| ||||| | | ||||| |||||| || | || || ||
Sbjct 2944095 CTGGATCTTGACCTTTACATTTTCTATCGTATCCGAGGGTTCAACCTCGAGGGTGATGGT 2944154
Query 38285 TTTACCCGTCAAGGTTTTCACGAATATCTGCATGTT 38320
|| ||||| | |||||||||||| |||||||| ||
Sbjct 2944155 CTTCCCCGTAAGGGTTTTCACGAAAATCTGCATTTT 2944190
>seq552
Length=1250306
Score = 100 bits (110), Expect = 2e-16
Identities = 78/93 (84%), Gaps = 5/93 (5%)
Strand=Plus/Plus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
|||||||||||||||||||||||||| || | |||||| ||||| || |||||| |
Sbjct 1191142 AAGCCCGTTCCCTTGGCTGTGGTTTCACTGGGTAGTAGGTAGGGACAGTGGGAATCTCCT 1191201
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGAC 25989
| |||| |||||| || ||||||||||||||||
Sbjct 1191202 TCATCCATTCATGTGCATCACTAATTAGATGAC 1191234
>seq366
Length=2258595
Score = 100 bits (110), Expect = 2e-16
Identities = 78/93 (84%), Gaps = 5/93 (5%)
Strand=Plus/Plus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
||||| |||||||||||||||||||| || | |||||| ||||| || ||||| ||
Sbjct 689968 AAGCCTGTTCCCTTGGCTGTGGTTTCTCTGGGTAGTAGGTAGGGACAGTGGGAATCTTGT 690027
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGAC 25989
| |||| |||||| |||||||||||||||||||
Sbjct 690028 TCATCCATTCATGTGCGTCACTAATTAGATGAC 690060
>seq290
Length=2922102
Score = 100 bits (110), Expect = 2e-16
Identities = 150/213 (70%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 38105 CAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTC 38164
|||||| | ||||||| | |||||||||||| ||||| ||||||||| || | | ||
Sbjct 1757555 CAACACAAGATGAAGAATAGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACATCCATC 1757614
Query 38165 GTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTC 38224
|| | ||| || || ||||| || || | ||| ||||| | || | |||||||| ||
Sbjct 1757615 TTCCAGTTGCTTGCCAGCAAAGATCAGCCTTTGCTGATCACAAGGAATTCCTTCTTTATC 1757674
Query 38225 CATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGT 38284
| || || ||| ||||| | | ||||| | |||| | || | || || ||
Sbjct 1757675 CTGGATCTTGGACTTTACATTTTCTATCGTATCCGAAGGTTCAGCCTCGAGGGTGATGGT 1757734
Query 38285 TTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317
|| ||| | | ||||||||| || ||||||||
Sbjct 1757735 CTTCCCCATAAGGGTTTTCACAAAAATCTGCAT 1757767
>seq11
Length=12831769
Score = 100 bits (110), Expect = 2e-16
Identities = 79/95 (83%), Gaps = 5/95 (5%)
Strand=Plus/Plus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
|||||| ||||||||||||||| ||| || |||||||| ||||| || |||||| |
Sbjct 5294965 AAGCCCATTCCCTTGGCTGTGGCTTCACTGGATAGTAGGTAGGGACAGTGGGAATCTCAT 5295024
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
| |||| ||||||||| ||||||||||| ||||||
Sbjct 5295025 TCATCCATTCATGCGCATCACTAATTAGGTGACGA 5295059
>seq69
Length=11786368
Score = 96.9 bits (106), Expect = 2e-15
Identities = 151/216 (70%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 38105 CAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTC 38164
|||||| | ||||||||| |||||| ||||| ||||| ||||||||| || | | ||
Sbjct 9297223 CAACACAAGATGAAGAGTAGACTCCTTCTGAATGTTGTAGTCAGACAAAGTACCTCCATC 9297164
Query 38165 GTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTC 38224
|| | ||| || || ||||| || || | ||| ||||| | || | |||||| || ||
Sbjct 9297163 TTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATGCCTTCCTTATC 9297104
Query 38225 CATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGT 38284
|| || ||| ||||| | |||||| |||||| || | | || ||
Sbjct 9297103 TTGGATCTTGGCCTTTACATTTTCTGTAGTATCCAAGGGTTCAACCTCGAGGTTGATGGT 9297044
Query 38285 TTTACCCGTCAAGGTTTTCACGAATATCTGCATGTT 38320
|| || || | |||||||||||| |||||||| ||
Sbjct 9297043 CTTCCCTGTAAGGGTTTTCACGAAAATCTGCATTTT 9297008
>seq63
Length=8132274
Score = 96.9 bits (106), Expect = 2e-15
Identities = 151/216 (70%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 38105 CAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTC 38164
|||||| | ||||||||| |||||| ||||| ||||| ||||||||| |||| | |
Sbjct 6710348 CAACACAAGATGAAGAGTAGACTCCTTCTGAATGTTGTAGTCAGACAAAGTACGTCCACC 6710407
Query 38165 GTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTC 38224
|| | ||| || || ||||| || || | ||| ||||| | || | ||||| || ||
Sbjct 6710408 TTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATC 6710467
Query 38225 CATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGT 38284
| | || ||| ||||| | | ||||| |||||| || | || || ||
Sbjct 6710468 CTGGACCTTGGTCTTTACATTTTCTATCGTATCCGAGGGTTCAACCTCGAGGGTGATGGT 6710527
Query 38285 TTTACCCGTCAAGGTTTTCACGAATATCTGCATGTT 38320
|| ||| | | |||||||||||| |||||||| ||
Sbjct 6710528 CTTCCCCATAAGGGTTTTCACGAAAATCTGCATTTT 6710563
>seq19
Length=20362211
Score = 96.9 bits (106), Expect = 2e-15
Identities = 151/216 (70%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 38105 CAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTC 38164
|||||| | ||||||||| |||||||||||| ||||| ||||||||| |||| ||||
Sbjct 6160557 CAACACAAGATGAAGAGTAAACTCCTTTTGAATGTTGTAGTCAGACAAAGTACGTCCGTC 6160498
Query 38165 GTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTC 38224
|| | ||| || || ||||| || || | ||| ||||| | || | |||||||| ||
Sbjct 6160497 TTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATC 6160438
Query 38225 CATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGT 38284
| || || ||| ||||| | | |||| |||||| || | || || ||
Sbjct 6160437 CTGGATCTTGGCCTTTACATTTTCTATTATATCCGAGGTTTCAAACTCAAGGGTGATGGT 6160378
Query 38285 TTTACCCGTCAAGGTTTTCACGAATATCTGCATGTT 38320
| | | | | |||||||| || |||||||| ||
Sbjct 6160377 CTCCCTCATAAGGGTTTTCAGAAAAATCTGCATTTT 6160342
>seq142
Length=5139840
Score = 93.3 bits (102), Expect = 3e-14
Identities = 150/216 (69%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 38105 CAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTC 38164
|||||| | ||||||||| |||| ||||||| ||||| ||| ||||| |||| |||
Sbjct 3725182 CAACACAAGATGAAGAGTAGACTCCCTTTGAATGTTGTAGTCAAACAAAGTACGTCTGTC 3725241
Query 38165 GTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTC 38224
|| | ||| || || ||||| || || | ||| ||| | | || | ||||| || ||
Sbjct 3725242 TTCCAGTTGCTTGCCAGCAAAGATCAGTCCTTGCTGACCAGGAGGAATTCCTTCCTTATC 3725301
Query 38225 CATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGT 38284
| || || ||| ||||| | | ||||| |||||| || | | || ||
Sbjct 3725302 CTGGATCTTGGCCTTTACATTTTCTATCGTATCCGAGGGTTCAACCTCGAGGTTGATGGT 3725361
Query 38285 TTTACCCGTCAAGGTTTTCACGAATATCTGCATGTT 38320
|| || || | |||||||||||| |||||||| ||
Sbjct 3725362 CTTCCCTGTAAGGGTTTTCACGAAAATCTGCATTTT 3725397
>seq83
Length=10167762
Score = 91.5 bits (100), Expect = 1e-13
Identities = 92/120 (77%), Gaps = 0/120 (0%)
Strand=Plus/Plus
Query 38106 AACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCG 38165
||||| | ||||||||| |||||||||||||||||| |||||||||| | || | ||
Sbjct 3734312 AACACAAGATGAAGAGTAGACTCCTTTTGAATATTGTAGTCAGACAAAATATGTCCATCT 3734371
Query 38166 TCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCC 38225
|| | ||| || || ||||| || || | ||| ||||| | |||| ||||| || |||
Sbjct 3734372 TCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGGATTCCTTCCTTATCC 3734431
>seq408
Length=1995431
Score = 89.7 bits (98), Expect = 3e-13
Identities = 66/77 (86%), Gaps = 0/77 (0%)
Strand=Plus/Plus
Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006
|||||||||||||||||||||||||||||||| |||||||||||| |||| || || |
Sbjct 1771412 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTTACGGTACTTGTTGACTATTGGCCTTGT 1771471
Query 20007 GGTAATATTTAGCCTTA 20023
| ||||||||||||
Sbjct 1771472 GCCGGTATTTAGCCTTA 1771488
>seq26
Length=11255447
Score = 89.7 bits (98), Expect = 3e-13
Identities = 75/92 (82%), Gaps = 5/92 (5%)
Strand=Plus/Plus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
||| ||||||||||||||||||||||||| ||||| || ||||| || |||||| |
Sbjct 7910826 AAGACCGTTCCCTTGGCTGTGGTTTCGCTGGATAGCAGGTAGGGACAGTGGAAATCTCTT 7910885
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGA 25988
| |||| ||||| | ||||||| ||||||||
Sbjct 7910886 TCATCCATTCATACATGTCACTACTTAGATGA 7910917
>seq450
Length=3447301
Score = 87.8 bits (96), Expect = 1e-12
Identities = 66/78 (85%), Gaps = 0/78 (0%)
Strand=Plus/Minus
Query 19946 TCTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCG 20005
|||||||||||| ||||||||||||||| |||| |||||||||||| |||||| |||||
Sbjct 2265138 TCTCTCTCTTCAGAGTTCTTTTCAACTTACCCTTACGGTACTTGTTGGCTATCCGTCTCC 2265079
Query 20006 CGGTAATATTTAGCCTTA 20023
| ||||||||| ||
Sbjct 2265078 TGCCGGTATTTAGCCGTA 2265061
>seq327
Length=2606971
Score = 87.8 bits (96), Expect = 1e-12
Identities = 77/95 (81%), Gaps = 7/95 (7%)
Strand=Plus/Plus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTC-- 25954
|||||| |||||||||||||||||||||| | |||||| ||||| || ||||||
Sbjct 2243844 AAGCCCATTCCCTTGGCTGTGGTTTCGCTGGTTAGTAGGTAGGGACAGTGGGAATCTCCA 2243903
Query 25955 GTTAATCCTTTCATGCGCGTCACTAATTAGATGAC 25989
|| || | |||||||| || ||||||||||||||
Sbjct 2243904 CTTCATTCATTCATGCGTGTGACTAATTAGATGAC 2243938
>seq513
Length=1864846
Score = 86.0 bits (94), Expect = 4e-12
Identities = 76/95 (80%), Gaps = 5/95 (5%)
Strand=Plus/Plus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
|||||| ||||||| || |||||||| || || ||||| ||||| || |||||| |
Sbjct 1058092 AAGCCCATTCCCTTCGCAGTGGTTTCCCTGGACAGTAGGTAGGGACAGTGGGAATCTCAT 1058151
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
| || |||||||||||||||||| |||||||||
Sbjct 1058152 TCTTCTATTCATGCGCGTCACTAATCAGATGACGA 1058186
>seq877
Length=245444
Score = 84.2 bits (92), Expect = 1e-11
Identities = 64/76 (84%), Gaps = 0/76 (0%)
Strand=Plus/Plus
Query 19948 TCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGCG 20007
||||||||||||||||||||||||||||||| | |||||||||| ||||| | |||
Sbjct 75669 TCTCTCTTCAAAGTTCTTTTCAACTTTCCCTTATGGTACTTGTTGACTATCAGGCTCTTA 75728
Query 20008 GTAATATTTAGCCTTA 20023
| ||||||||||||
Sbjct 75729 CTGGTATTTAGCCTTA 75744
>seq530
Length=1346014
Score = 84.2 bits (92), Expect = 1e-11
Identities = 72/88 (82%), Gaps = 1/88 (1%)
Strand=Plus/Minus
Query 19935 TTATT-GTCATTTCTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCG 19993
||||| || ||||| |||||||||| ||||||||| |||| ||| ||||||||||||
Sbjct 360887 TTATTCGTTTTTTCTATCTCTTCAAATTTCTTTTCAGCTTTGCCTTACGGTACTTGTTGA 360828
Query 19994 CTATCGGTCTCGCGGTAATATTTAGCCT 20021
|||||||||| | | ||||||||||
Sbjct 360827 CTATCGGTCTTGTGCAGGTATTTAGCCT 360800
>seq302
Length=2779183
Score = 82.4 bits (90), Expect = 5e-11
Identities = 74/93 (80%), Gaps = 5/93 (5%)
Strand=Plus/Plus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
|||||| |||||||||||||||||| ||| || ||||| ||||| | ||||| ||
Sbjct 799202 AAGCCCATTCCCTTGGCTGTGGTTTTGCTGGACAGTAGGTAGGGACAGTGAGAATCTTGT 799261
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGAC 25989
| |||| |||| || ||||||||||| |||||
Sbjct 799262 TCATCCATTCAGGCATGTCACTAATTACATGAC 799294
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 334917987998636
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |