Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cebus_20capucinus_20imitator_20[refseq_20GCF_5F001604975.1_202016- 04-04] 7,156 sequences; 2,717,703,182 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq170 138 3e-27 seq434 132 1e-25 seq573 129 1e-24 seq3 129 1e-24 seq181 123 6e-23 seq292 120 7e-22 seq142 120 7e-22 seq25 120 7e-22 seq4 120 7e-22 seq231 116 9e-21 seq683 113 1e-19 seq41 113 1e-19 seq72 111 4e-19 seq503 109 1e-18 seq290 109 1e-18 seq132 109 1e-18 seq19 104 6e-17 seq407 100 7e-16 seq3278 98.7 2e-15 seq1 98.7 2e-15 seq53 96.9 8e-15 seq58 95.1 3e-14 seq38 95.1 3e-14 seq34 95.1 3e-14 seq966 93.3 1e-13 seq276 91.5 3e-13 seq83 91.5 3e-13 seq15 89.7 1e-12 seq404 87.8 4e-12 >seq170 Length=4466143 Score = 138 bits (152), Expect = 3e-27 Identities = 168/229 (73%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 ||| || ||||| | || || || |||| ||| ||||||||||| || ||||| | Sbjct 3883228 TCCCCCTCGGAGACGGAGGACCAGGTGAAGGGTGGACTCTTTTTGGATGTTGTAGTCAGA 3883287 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 || ||||| || ||||| | || ||||| || ||||||| | ||| || | || Sbjct 3883288 CAGGGTGCGCCCATCTTCCAGCTGCTTTCCGGCAAAGATCAACCTCTGCTGGTCAGGAGG 3883347 Query 288366 GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTAC 288425 ||| ||||| || |||||||| || || || ||||| || || | || || | || || Sbjct 3883348 GATGCCTTCCTTGTCCTGGATCTTTGCCTTGACGTTCTCAATGGTGTCACTGGGCTCCAC 3883407 Query 288426 TTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 ||||| ||||| ||||| |||||||| ||||| ||||| ||||||||| Sbjct 3883408 CTCGAGGGTGATGGTCTTGCCGGTCAGTGTCTTCACGAAGATCTGCATT 3883456 >seq434 Length=1819716 Score = 132 bits (146), Expect = 1e-25 Identities = 168/231 (73%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || ||||| | || ||||||| || || || || || |||||||| | Sbjct 1331282 CCACCACGAAGTCTCAACACAAGATGAAGAGTAGACTCCTTCTGAATGTTATAGTCAGAC 1331341 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | || ||||| ||||| | ||| || || || |||||||| | || ||| | || Sbjct 1331342 AAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGA 1331401 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 |||||||| ||||||||||| || || || || |||||||| | ||| | ||| || Sbjct 1331402 ATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATCGTATCCGAGGGTTCAACC 1331461 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTATG 288477 ||||| ||||| |||||||| || || || || ||||| ||||||||| || Sbjct 1331462 TCGAGGGTGATGGTCTTCCCTGTAAGGGTTTTCACGAAAATCTGCATTTTG 1331512 >seq573 Length=1150292 Score = 129 bits (142), Expect = 1e-24 Identities = 167/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || ||||| | || ||||||| || || || || || || ||||| | Sbjct 200470 CCACCACGAAGTCTCAACACAAGATGAAGAGTAGACTCCTTCTGAATGTTGTAGTCAGAC 200529 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | || ||||| ||||| | ||| || || || |||||||| | || ||| | || Sbjct 200530 AAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGA 200589 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 |||||||| ||||||||||| || || || || |||||||| | ||| | ||| || Sbjct 200590 ATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATCGTATCCGAGGGTTCAACC 200649 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTATG 288477 ||||| ||||| |||||||| || || || || ||||| ||||||||| || Sbjct 200650 TCGAGGGTGATGGTCTTCCCCGTAAGGGTTTTCACGAAAATCTGCATTTTG 200700 >seq3 Length=16812482 Score = 129 bits (142), Expect = 1e-24 Identities = 167/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || ||||| || || ||||||| || || || || || || ||||| | Sbjct 14706844 CCACCACGAAGTCTCAGCACAAGATGAAGAGTAGACTCCTTCTGAATGTTGTAGTCAGAC 14706903 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | || ||||| ||||| | ||| || || || |||||||| | || ||| | || Sbjct 14706904 AAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGA 14706963 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 |||||||| ||||||||||| || || || || |||||||| ||| | ||| || Sbjct 14706964 ATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATCATATCTGAGGGTTCAACC 14707023 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTATG 288477 ||||| ||||| |||||||| || || || || ||||| ||||||||| || Sbjct 14707024 TCGAGGGTGATGGTCTTCCCCGTAAGGGTTTTCACGAAAATCTGCATTTTG 14707074 >seq181 Length=4179193 Score = 123 bits (136), Expect = 6e-23 Identities = 166/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || ||||| | || ||||||| || || || || || || ||||| | Sbjct 2580467 CCACCACGAAGTCTCAACACAAGATGAAGAGTAGACTCCTTCTGAATGTTGTAGTCAGAC 2580526 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | || ||||| ||||| | ||| || || || |||||||| | || ||| | | Sbjct 2580527 AAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGACGA 2580586 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 |||||||| ||||||||||| || || || || |||||||| | ||| | ||| || Sbjct 2580587 ATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATCGTATCCGAGGGTTCAACC 2580646 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTATG 288477 ||||| ||||| |||||||| || || || || ||||| ||||||||| || Sbjct 2580647 TCGAGGGTGATGGTCTTCCCCGTAAGGGTTTTCACGAAAATCTGCATTTTG 2580697 >seq292 Length=4239571 Score = 120 bits (132), Expect = 7e-22 Identities = 165/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| | ||||| | || ||||||| || || || || ||||| ||||| | Sbjct 2943961 CCACCATGAAGTCTCAACACAAGATGAAGAGTAGACTCCTTCTGAATATTGTAGTCAGAC 2944020 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | |||||||| | ||| | || || || || |||||||| | || ||| | || Sbjct 2944021 AAAGTGCGTCCATATTCCAGTTCCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGA 2944080 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 |||||||| ||||||||||| || | || || |||||||| | ||| | ||| || Sbjct 2944081 ATTCCTTCCTTATCCTGGATCTTGACCTTTACATTTTCTATCGTATCCGAGGGTTCAACC 2944140 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTATG 288477 ||||| ||||| |||||||| || || || || ||||| ||||||||| || Sbjct 2944141 TCGAGGGTGATGGTCTTCCCCGTAAGGGTTTTCACGAAAATCTGCATTTTG 2944191 >seq142 Length=5139840 Score = 120 bits (132), Expect = 7e-22 Identities = 165/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || ||||| | || ||||||| || || |||| || || ||||| Sbjct 3725168 CCACCACGAAGTCTCAACACAAGATGAAGAGTAGACTCCCTTTGAATGTTGTAGTCAAAC 3725227 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | || |||| |||||| | ||| || || || |||||||| | || ||| | || Sbjct 3725228 AAAGTACGTCTGTCTTCCAGTTGCTTGCCAGCAAAGATCAGTCCTTGCTGACCAGGAGGA 3725287 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 |||||||| ||||||||||| || || || || |||||||| | ||| | ||| || Sbjct 3725288 ATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATCGTATCCGAGGGTTCAACC 3725347 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTATG 288477 ||||| |||| |||||||| || || || || ||||| ||||||||| || Sbjct 3725348 TCGAGGTTGATGGTCTTCCCTGTAAGGGTTTTCACGAAAATCTGCATTTTG 3725398 >seq25 Length=15232693 Score = 120 bits (132), Expect = 7e-22 Identities = 165/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || ||||| || || ||||||| || || ||||| || || ||||| | Sbjct 12145241 CCACCACGAAGTCTCAGCACCAGATGAAGAGTAGACTCCTTTTGAATGTTGTAGTCAGAC 12145300 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || | ||| ||||||| ||| || || || ||||||| | || ||| | || Sbjct 12145301 AGAGTACATCCATCTTCTAGTTGCTTGCCAGCATAGATCAGTCTTTGCTGATCAGGAGGA 12145360 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 |||||||| ||||||||||| || || || ||||||||| | | ||| | ||| | Sbjct 12145361 ATTCCTTCCTTATCCTGGATCTTGGCCTTTACGTTTTCTTTCGTATCTGAGGGTTCAGCC 12145420 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTATG 288477 | ||| |||| |||||| | || ||||| || | ||| ||||||||| || Sbjct 12145421 TGGAGGATGATAGTCTTCTCCGTAAGAGTTTTCATGAAAATCTGCATTTTG 12145471 >seq4 Length=15321207 Score = 120 bits (132), Expect = 7e-22 Identities = 165/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || | ||| | || ||||||| || || || || || || ||||| | Sbjct 5243222 CCACCACGAAATCTCAACACAAGATGAAGAGTAGACTCCTTCTGAATGTTGTAGTCAGAC 5243163 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | || ||||| ||||| | ||| || || || |||||||| | || ||| | || Sbjct 5243162 AAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGA 5243103 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 |||||||| |||||||||||||| || || || |||||||| | || | ||| || Sbjct 5243102 ATTCCTTCCTTATCCTGGATTTTGGCCTTTACATTTTCTATCGTTTCCGAGGGTTCAACC 5243043 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTATG 288477 ||||| || || |||||||| || || || || ||||| ||||||||| || Sbjct 5243042 TCGAGGGTTATGGTCTTCCCCGTAAGGGTTTTCACGAAAATCTGCATTTTG 5242992 >seq231 Length=3498576 Score = 116 bits (128), Expect = 9e-21 Identities = 156/216 (72%), Gaps = 6/216 (3%) Strand=Plus/Plus Query 288261 AAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTC 288320 |||||| |||| | ||| ||||||||||| || ||||| | || ||| | || || Sbjct 69570 AAGTACCAGATATAGAGTGGACTCTTTTTGGATGTTGTAGTCAGACAGGGTGTGCCCATC 69629 Query 288321 TTCTAATTGTTTTCCTGCGAAGATCA---GACGCTGTTGAGAATCTGGGATTCCTTCTTT 288377 ||| | || ||||| || ||||||| ||||| | || | ||||| ||||| || Sbjct 69630 TTCCAGCTGCTTTCCAGCAAAGATCAACCTCCGCTGGTCAGGA---GGGATGCCTTCCTT 69686 Query 288378 ATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGAT 288437 |||||||| || || || ||||| || || | || || | || || || || ||||| Sbjct 69687 GTCCTGGATCTTTGCCTTGACGTTCTCAATGGTGTCACTGGGCTCGACCTCAAGGGTGAT 69746 Query 288438 CGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| || ||||| ||||| || ||||||||||| Sbjct 69747 GGTCTTACCAGTCAGGGTCTTCACTAATATCTGCAT 69782 >seq683 Length=714717 Score = 113 bits (124), Expect = 1e-19 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | || || || || | ||| ||||| ||||| || ||||| | | Sbjct 111376 CCACCTCGCAGGCGCAGCACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCTGAG 111435 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 |||||||| || || || | | ||| || || || ||||||||||| ||| | |||| Sbjct 111436 AGCGTGCGGCCATCCTCCAGCTATTTACCGGCAAATATCAGACGCTGCTGATCAGGTGGG 111495 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || || || ||||| ||||| || || || || | || || | || || Sbjct 111496 ATACCCTCCTTGTCTTGAATTTTGGCTTTAACATTCTCAATGGTGTCACTGGGCTCGACC 111555 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || ||||| ||||| || | || ||||| || || |||||||| Sbjct 111556 TCAAGGGTGATGGTCTTGCCCATGAGGGTCTTCACAAAGATCTGCAT 111602 >seq41 Length=9995516 Score = 113 bits (124), Expect = 1e-19 Identities = 140/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 ||||| ||||| || ||||| | || |||| ||| ||||| | ||||| || || ||| Sbjct 7312285 TCTTTCTGGATGTTGTAGTCAGATAGGGTGCATCCATCTTCCAGCTGTTTCCCAGCAAAG 7312226 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 || | ||| || | ||||| |||||||| |||||||| || || || |||| Sbjct 7312225 ATGGATCTCTGCTGGTCAGGAGGGATGCCTTCTTTGTCCTGGATCTTTGCCTTGCCGTTC 7312166 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | || | | || || ||||| ||||| ||||| || ||||||||||| ||| Sbjct 7312165 TCAATGGTGTCACCGGGCTCGACCTCGAGGGTGATGGTCTTGCCAGTCAGAGTCTTCACG 7312106 Query 288463 AATATCTGCATT 288474 || ||||||||| Sbjct 7312105 AAGATCTGCATT 7312094 >seq72 Length=7750101 Score = 111 bits (122), Expect = 4e-19 Identities = 159/223 (71%), Gaps = 1/223 (0%) Strand=Plus/Plus Query 288256 AGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGT 288315 ||||| | || ||||||| || || || || || || ||||| | | |||||| Sbjct 2355985 AGTCTCAACACAAGATGAAGAGTAGACTCCTTCTGAATGTTGTAGTCAGATAAAGTGCGT 2356044 Query 288316 CCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCT 288375 || ||||| | | || || || |||||||| | || ||| | || |||||||| Sbjct 2356045 CCATCTTCCAGTGTCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCC 2356104 Query 288376 TTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTG 288435 |||||||||||||| || || || |||||||| | ||| | ||| || ||||| || Sbjct 2356105 TTATCCTGGATTTTGGCCTTTACATTTTCTATCGTATCCGAGGGTTCAACCTCGAGGGTA 2356164 Query 288436 ATCGTC-TTCCCGGTCAGAGTCTTGACGAATATCTGCATTATG 288477 || ||| ||||| || ||||| || || || ||||||||| || Sbjct 2356165 ATGGTCTTTCCCCGTAAGAGTTTTCACAAAAATCTGCATTTTG 2356207 >seq503 Length=1449082 Score = 109 bits (120), Expect = 1e-18 Identities = 143/196 (73%), Gaps = 4/196 (2%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 ||||| ||||| || || || | ||| |||| || ||||| | || || ||||| ||| Sbjct 1047226 TCTTTCTGGATGTTGTAATCAGAGAGAGTGCAGCCATCTTCCAGCTGCTTGCCTGCAAAG 1047167 Query 288343 ATCAGACGCTGTTGAGAATCTGGG-ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 || || | ||| || || ||| || ||||| ||||||||||| || || ||||| || Sbjct 1047166 ATGAGCCTCTGCTGG---TCGGGGGATGCCTTCCTTATCCTGGATCTTGGCCTTCACATT 1047110 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 ||| || | || || | || || || | ||||| ||||| |||||||| ||||| || Sbjct 1047109 TTCGATGGTGTCACTAGGCTCCACCTCCAAGGTGATGGTCTTGCCGGTCAGGGTCTTCAC 1047050 Query 288462 GAATATCTGCATTATG 288477 ||| || | |||| || Sbjct 1047049 GAAGATATACATTTTG 1047034 >seq290 Length=2922102 Score = 109 bits (120), Expect = 1e-18 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || ||||| | || ||||||| | || ||||| || || ||||| | Sbjct 1757541 CCACCACGAAGTCTCAACACAAGATGAAGAATAGACTCCTTTTGAATGTTGTAGTCAGAC 1757600 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | || | ||| ||||| | ||| || || || |||||||| | || ||| | || Sbjct 1757601 AAAGTACATCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGCCTTTGCTGATCACAAGGA 1757660 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 |||||||||||||||||||| || | || || |||||||| | ||| | ||| | Sbjct 1757661 ATTCCTTCTTTATCCTGGATCTTGGACTTTACATTTTCTATCGTATCCGAAGGTTCAGCC 1757720 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 ||||| ||||| |||||||| | || || || || || ||||||||| Sbjct 1757721 TCGAGGGTGATGGTCTTCCCCATAAGGGTTTTCACAAAAATCTGCATT 1757768 >seq132 Length=5349423 Score = 109 bits (120), Expect = 1e-18 Identities = 141/195 (72%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 ||||| ||||| || ||||| | || ||||| || ||||| | || |||| ||| ||| Sbjct 1755016 TCTTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTTCGTGCAAAG 1754957 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 || || | || || | ||||| ||||| ||||||||||| || || ||||| ||| Sbjct 1754956 ATGAGCCTGTGGTGGTCGGCGGGGATGCCTTCCTTATCCTGGATCTTGGCCTTCACATTT 1754897 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || | | || || | || || || || ||||| ||||| ||| |||| ||||| | | Sbjct 1754896 TCAGTGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGATCAGGGTCTTCATG 1754837 Query 288463 AATATCTGCATTATG 288477 | ||||||||| || Sbjct 1754836 ACGATCTGCATTTTG 1754822 >seq19 Length=20362211 Score = 104 bits (114), Expect = 6e-17 Identities = 162/232 (70%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 |||||| | ||||| | || ||||||| || || ||||| || || ||||| | Sbjct 6160572 TCCACCACAAAGTCTCAACACAAGATGAAGAGTAAACTCCTTTTGAATGTTGTAGTCAGA 6160513 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 | || ||||||||||| | ||| || || || |||||||| | || ||| | || Sbjct 6160512 CAAAGTACGTCCGTCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGG 6160453 Query 288366 GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTAC 288425 |||||||||||||||||||| || || || || |||||||| ||| | ||| | Sbjct 6160452 AATTCCTTCTTTATCCTGGATCTTGGCCTTTACATTTTCTATTATATCCGAGGTTTCAAA 6160393 Query 288426 TTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTATG 288477 || || ||||| |||| || | || || || | || ||||||||| || Sbjct 6160392 CTCAAGGGTGATGGTCTCCCTCATAAGGGTTTTCAGAAAAATCTGCATTTTG 6160341 >seq407 Length=3256691 Score = 100 bits (110), Expect = 7e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | || || || || | ||| ||||| ||||| || ||||| | | Sbjct 904219 CCACCTCGCAGGCGCAGCACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCTGAG 904278 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 |||||||| || || || | || | | || || ||||||||||| || | |||| Sbjct 904279 AGCGTGCGGCCATCCTCCAGCTGCTGGCTGGCAAATATCAGACGCTGCTGGTCAGGTGGG 904338 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || || || ||||| ||||| || || || || | || | | || || Sbjct 904339 ATACCCTCCTTGTCTTGAATTTTGGCTTTGACATTCTCAATGGTGTCATTGGGCTCGACC 904398 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 || || ||||| ||||| || || || ||||| || || ||||||||| Sbjct 904399 TCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTCACAAAGATCTGCATT 904446 >seq3278 Length=1846 Score = 98.7 bits (108), Expect = 2e-15 Identities = 90/114 (79%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 288364 GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 ||||| ||||| ||||||||||| || || ||||| ||||| || | || || | || Sbjct 10 GGGATGCCTTCCTTATCCTGGATCTTGGCCTTCACATTTTCGATGGTGTCACTGGGCTCC 69 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTATG 288477 || || || ||||| ||||| |||||||| ||||| ||||| ||||||||| || Sbjct 70 ACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCATTTTG 123 >seq1 Length=21314971 Score = 98.7 bits (108), Expect = 2e-15 Identities = 137/191 (72%), Gaps = 2/191 (1%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 ||||| ||||| || ||||| | ||| |||| || || || | ||||| || || || Sbjct 18631120 TCTTTCTGGATGTTGTAGTCTGAGAG--TGCGGCCATCCTCCAGCTGTTTACCAGCAAAT 18631063 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 ||||||||||| || | |||||| ||||| || | || ||||| ||||| || || Sbjct 18631062 ATCAGACGCTGCTGGTCAGGTGGGATACCTTCCTTGTATTGAATTTTGGCTTTGACATTC 18631003 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 | || | || || | || || || || ||||| ||||| || || | |||||| || Sbjct 18631002 TTAATGGTGTCACTGGGCTCGACCTCAAGGGTGATGGTCTTGCCCGTGACAGTCTTCACA 18630943 Query 288463 AATATCTGCAT 288473 || |||||||| Sbjct 18630942 AAGATCTGCAT 18630932 Score = 93.3 bits (102), Expect = 1e-13 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 ||||| ||||| || ||||| | |||||||| || || || | ||||| || || || Sbjct 4712555 TCTTTCTGGATGTTGTAGTCTGAGAGCGTGCAGCCATCCTCCAGCTGTTTGCCGGCAAAC 4712496 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 ||||||||||| || | |||||| | || || || || ||||| ||||| || || Sbjct 4712495 ATCAGACGCTGCTGGTCAGGTGGGATAGCCTCCTTGTCTTGAATTTTGGCTTTGACATTC 4712436 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || | | || || | || || || || ||||| ||||| || | || ||||| || Sbjct 4712435 TCAGTGGTGTCACTGGGCTCGACCTCAAGGGTGATGGTCTTGCCCATGAGGGTCTTCACA 4712376 Query 288463 AATATCTGCAT 288473 || ||||| || Sbjct 4712375 AAGATCTGTAT 4712365 >seq53 Length=8749341 Score = 96.9 bits (106), Expect = 8e-15 Identities = 160/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || || | || ||||||| || || || || || | ||||| | Sbjct 1284764 CCACCACGAAGACTCAACACAAGATGAAGAGTAGACTCCTTCTGAATGCTGTAGTCAGAC 1284823 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | || ||||| ||||| | ||| | || || |||||||| | || ||| | | Sbjct 1284824 AAAGTACGTCCATCTTCCAGTTGCCTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAAGA 1284883 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 |||||||| ||||||||||| || || || || | |||||| | || | ||| || Sbjct 1284884 ATTCCTTCCTTATCCTGGATCTTGGCCTTTACATCTTCTATCGTTTCCAAGGTTTCAACC 1284943 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTATG 288477 ||||| ||||| |||||||| || || || || || || ||||||||| || Sbjct 1284944 TCGAGGGTGATGGTCTTCCCTGTAAGGGTTTTCACAAAAATCTGCATTTTG 1284994 >seq58 Length=8566441 Score = 95.1 bits (104), Expect = 3e-14 Identities = 138/195 (71%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 ||||||||||| || | ||| | || ||| | || ||||| | || ||||| ||| Sbjct 1046055 TCTTTTTGGATGTTCTGGTCAGAAAGAGTGTGACCATCTTCCAGCCACTTGCCTGCAAAG 1046114 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 || || | ||| || | ||||| ||||||||||||||||| || || ||||| ||| Sbjct 1046115 ATGAGCCTCTGCTGGTCAGTGGGGATGCCTTCTTTATCCTGGATCTTGGCCTTCACATTT 1046174 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | || || | || || || || ||||| ||||| | |||| ||||| | | Sbjct 1046175 TCCATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCTAGTCAAGGTCTTCATG 1046234 Query 288463 AATATCTGCATTATG 288477 || || | |||| || Sbjct 1046235 AAGATTTTCATTTTG 1046249 >seq38 Length=10264441 Score = 95.1 bits (104), Expect = 3e-14 Identities = 158/227 (70%), Gaps = 1/227 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | || || || || | ||| ||||| ||||| || ||||| | | Sbjct 9540872 CCACCTCGCAGGCGCAGCACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCTGAG 9540813 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||| | || || || | ||||| || || || ||||||||||| || | |||| Sbjct 9540812 AGTGTGTGGCCATCCTCCAGCTGTTTGCCGGCAAATATCAGACGCTGCTGGTCAGGTGGG 9540753 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || || || ||||| ||||| || || || || | || | | || || Sbjct 9540752 ATACCCTCCTTGTCTTGAATTTTGGCTTTGACATTCTCAATGGTGTCAC-GGGCTCGACC 9540694 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || ||||| ||||| || | || ||||| || || |||||||| Sbjct 9540693 TCAAGGGTGATGGTCTTGCCCATGAGGGTCTTCACAAAGATCTGCAT 9540647 >seq34 Length=10557659 Score = 95.1 bits (104), Expect = 3e-14 Identities = 138/195 (71%), Gaps = 4/195 (2%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || ||||| || || ||||| | || |||| ||||| | ||| || || || ||| Sbjct 1465715 TCCTTTTGAATGTTGTAGTC----AAAGTATGTCCATCTTCCAGTTGCTTGCCAGCAAAG 1465660 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 ||||| | | ||| | || |||||||| ||||||||||| || || || || ||| Sbjct 1465659 ATCAGTCTTTCCTGATCAGGAGGAATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTT 1465600 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 ||||| | | || ||||| || ||||| ||||| ||||||| | | || || || Sbjct 1465599 TCTATCGTACCGGAGGATTCAACCTCGAGGGTGATGATCTTCCCCATGGGGGTTTTCACA 1465540 Query 288463 AATATCTGCATTATG 288477 || ||||||||| || Sbjct 1465539 AAAATCTGCATTTTG 1465525 >seq966 Length=127580 Score = 93.3 bits (102), Expect = 1e-13 Identities = 160/231 (69%), Gaps = 5/231 (2%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || ||||| | || ||||||| ||| || ||| | || || |||| | Sbjct 10669 CCACCACGAAGTCTCAACACAAGATGAAGAGTGGACTCCTTTAGAATGTTGCAGTCAGAC 10610 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | || ||||| ||||| | || || || || |||||||| | || || || || Sbjct 10609 AAAGTACGTCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGTCTTTGCTG-GA----GGA 10555 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 |||| ||| ||||||||||| || || || || |||||| | | ||| | ||| || Sbjct 10554 ATTCTTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTGTCGTATCCAAGGGTTCAACC 10495 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTATG 288477 | || ||||| ||||||| || | || || ||||| ||||||||| || Sbjct 10494 TTCAGGGTGATGGTCTTCCTTGTTGGGGTTTTCACGAAAATCTGCATTTTG 10444 >seq276 Length=3089952 Score = 91.5 bits (100), Expect = 3e-13 Identities = 115/158 (73%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 288320 CTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTAT 288379 |||| | ||| || || || |||||||| | || ||| | || |||||||| |||| Sbjct 1638036 CTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTAT 1637977 Query 288380 CCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCG 288439 ||||||| || || || || |||||||| | ||| | ||| || || || ||||| | Sbjct 1637976 CCTGGATCTTGGCCTTTACATTTTCTATTGTATCTGAGGGTTCAACCTCAAGGGTGATGG 1637917 Query 288440 TCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTATG 288477 ||||||| | || || || | ||| ||||||||| || Sbjct 1637916 TCTTCCCCATAAGGGTTTTCATGAAAATCTGCATTTTG 1637879 >seq83 Length=10167762 Score = 91.5 bits (100), Expect = 3e-13 Identities = 134/190 (71%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 288257 GTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTC 288316 |||| | || ||||||| || || ||||| ||||| ||||| | | | ||| Sbjct 3734307 GTCTGAACACAAGATGAAGAGTAGACTCCTTTTGAATATTGTAGTCAGACAAAATATGTC 3734366 Query 288317 CGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTT 288376 | ||||| | ||| || || || |||||||| | || ||| | ||||||||||| | Sbjct 3734367 CATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGGATTCCTTCCT 3734426 Query 288377 TATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGA 288436 |||||||||| || || || | ||||||||| | ||| | ||| || || || |||| Sbjct 3734427 TATCCTGGATCTTGGCCTTTATGTTTTCTATCGTATCTGAGGGTTCAACCTCAAGGGTGA 3734486 Query 288437 TCGTCTTCCC 288446 | || ||||| Sbjct 3734487 TGGTTTTCCC 3734496 >seq15 Length=12290832 Score = 89.7 bits (98), Expect = 1e-12 Identities = 163/236 (69%), Gaps = 7/236 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||||| |||| | |||| ||||| ||| || ||||| | || ||||| | Sbjct 9006302 CCACCGCAATGTCTCAACACGACATGAACAGTGGACTCCTTTTGAACGTTGTAGTCAAAG 9006361 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | | | || |||| | ||| || || || |||||||| | |||||| | || Sbjct 9006362 AACAT----CCAACTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGTTGATCAGGAGGA 9006417 Query 288367 ATTCCTTCTTTATCCTGGATTTTCG--CTTT-CACGTTTTCTATAGAATCGCTCGATTCT 288423 |||||||| ||||||||||| || | |||| || |||||||| ||| | ||| Sbjct 9006418 ATTCCTTCCTTATCCTGGATCTTGGGCCTTTACATTTTTTCTATCTTATCTGAGGGTTCA 9006477 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTATGTT 288479 || | ||| ||||| |||||||| | || || || || || ||||||||| |||| Sbjct 9006478 ACCTTGAGGGTGATGGTCTTCCCCTTAAGGGTTTTCACAAAAATCTGCATTTTGTT 9006533 >seq404 Length=2013455 Score = 87.8 bits (96), Expect = 4e-12 Identities = 143/203 (70%), Gaps = 10/203 (5%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 ||||| ||||| || ||||| | || ||||| || |||| | | | || ||||| || Sbjct 951951 TCTTTCTGGATGTTGTAGTCAGA-AG-GTGCGGCCATCTTTCAGTGGCTTGCCTGCAAAA 952008 Query 288343 ATCAGAC---GCTGTT-----GAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTT 288394 || || | |||||| | | ||||| ||| | ||||||||||| || || | Sbjct 952009 ATGAGCCTCTGCTGTTCGGGGGGGTGGGGGGGATGCCTCCCTTATCCTGGATCTTGGCCT 952068 Query 288395 TCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAG 288454 |||| |||| || | || || | || || || || ||||| ||||| |||||||| | Sbjct 952069 TCACATTTTACATGGTGTCACTAGGCTCCACCTCCAGGGTGATTGTCTTGCCGGTCAGGG 952128 Query 288455 TCTTGACGAATATCTGCATTATG 288477 |||| || || ||||||||| || Sbjct 952129 TCTTCACAAACATCTGCATTTTG 952151 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179546241911768