Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cebus_20capucinus_20imitator_20[refseq_20GCF_5F001604975.1_202016-
04-04] 7,156 sequences; 2,717,703,182 total letters
Query= NC_010276.1
Length=156179
Score E
Sequences producing significant alignments: (Bits) Value
seq170 136 4e-27
seq4 123 2e-23
seq503 120 3e-22
seq573 114 1e-20
seq3 114 1e-20
seq434 111 2e-19
seq181 111 2e-19
seq72 107 2e-18
seq407 105 7e-18
seq411 104 2e-17
seq38 104 2e-17
seq292 102 8e-17
seq142 102 8e-17
seq69 102 8e-17
seq1 100 3e-16
seq63 98.7 1e-15
seq25 96.9 3e-15
seq19 95.1 1e-14
seq290 91.5 1e-13
seq828 86.0 6e-12
seq93 86.0 6e-12
seq276 84.2 2e-11
seq525 82.4 8e-11
seq404 82.4 8e-11
seq259 82.4 8e-11
seq64 82.4 8e-11
>seq170
Length=4466143
Score = 136 bits (150), Expect = 4e-27
Identities = 158/213 (74%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
|| || || |||| || || |||||||| |||||||| || | | ||||||| | |||
Sbjct 3883244 AGGACCAGGTGAAGGGTGGACTCTTTTTGGATGTTGTAGTCAGACAGGGTGCGCCCATCT 3883303
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
|| |||||||| |||||| | || | || ||||||||| ||||| || ||||| || ||
Sbjct 3883304 TCCAGCTGCTTTCCGGCAAAGATCAACCTCTGCTGGTCAGGAGGGATGCCTTCCTTGTCC 3883363
Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411
|| || ||| ||| || ||| | || |||| || ||||| || | || | ||||
Sbjct 3883364 TGGATCTTTGCCTTGACGTTCTCAATGGTGTCACTGGGCTCCACCTCGAGGGTGATGGTC 3883423
Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCATT 64444
|||||||||| || || ||||| || ||||||
Sbjct 3883424 TTGCCGGTCAGTGTCTTCACGAAGATCTGCATT 3883456
>seq4
Length=15321207
Score = 123 bits (136), Expect = 2e-23
Identities = 166/231 (72%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
||| || || ||||| | ||| ||||||| || || || || ||||||||||| || |
Sbjct 5243223 ACCACCACGAAATCTCAACACAAGATGAAGAGTAGACTCCTTCTGAATGTTGTAGTCAGA 5243164
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
| || || | ||||| || |||||||| ||| | || || | ||||| || |||||
Sbjct 5243163 CAAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGG 5243104
Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395
||||||||| || || || ||||| ||||||| || | || || || || ||
Sbjct 5243103 AATTCCTTCCTTATCCTGGATTTTGGCCTTTACATTTTCTATCGTTTCCGAGGGTTCAAC 5243044
Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446
|| | |||| |||||| || || | ||||| |||||||| ||||||||
Sbjct 5243043 CTCGAGGGTTATGGTCTTCCCCGTAAGGGTTTTCACGAAAATCTGCATTTT 5242993
>seq503
Length=1449082
Score = 120 bits (132), Expect = 3e-22
Identities = 147/200 (74%), Gaps = 2/200 (1%)
Strand=Plus/Minus
Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306
||||| ||||| || ||||||||||| | || |||| | ||||| |||||||||||
Sbjct 1047232 GTCGACTCTTTCTGGATGTTGTAATCAGAGAGAGTGCAGCCATCTTCCAGCTGCTTGCCT 1047173
Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366
||| | ||||||| ||||||||||| || || ||||| || || || || || |||
Sbjct 1047172 GCAAAGATGAGCCTCTGCTGGTCGG--GGGATGCCTTCCTTATCCTGGATCTTGGCCTTC 1047115
Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426
||| || | || |||| | ||||| || | || | |||||||||||||| ||
Sbjct 1047114 ACATTTTCGATGGTGTCACTAGGCTCCACCTCCAAGGTGATGGTCTTGCCGGTCAGGGTC 1047055
Query 64427 TTTACGAAAATTTGCATTTT 64446
|| ||||| || | ||||||
Sbjct 1047054 TTCACGAAGATATACATTTT 1047035
>seq573
Length=1150292
Score = 114 bits (126), Expect = 1e-20
Identities = 164/231 (71%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
||| || || | ||| | ||| ||||||| || || || || ||||||||||| || |
Sbjct 200469 ACCACCACGAAGTCTCAACACAAGATGAAGAGTAGACTCCTTCTGAATGTTGTAGTCAGA 200528
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
| || || | ||||| || |||||||| ||| | || || | ||||| || |||||
Sbjct 200529 CAAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGG 200588
Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395
||||||||| || || || || || ||||||| || | ||||| || || ||
Sbjct 200589 AATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATCGTATCCGAGGGTTCAAC 200648
Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446
|| | || | |||||| || || | ||||| |||||||| ||||||||
Sbjct 200649 CTCGAGGGTGATGGTCTTCCCCGTAAGGGTTTTCACGAAAATCTGCATTTT 200699
>seq3
Length=16812482
Score = 114 bits (126), Expect = 1e-20
Identities = 164/231 (71%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
||| || || | ||| ||||| ||||||| || || || || ||||||||||| || |
Sbjct 14706843 ACCACCACGAAGTCTCAGCACAAGATGAAGAGTAGACTCCTTCTGAATGTTGTAGTCAGA 14706902
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
| || || | ||||| || |||||||| ||| | || || | ||||| || |||||
Sbjct 14706903 CAAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGG 14706962
Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395
||||||||| || || || || || ||||||| || | |||| || || ||
Sbjct 14706963 AATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATCATATCTGAGGGTTCAAC 14707022
Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446
|| | || | |||||| || || | ||||| |||||||| ||||||||
Sbjct 14707023 CTCGAGGGTGATGGTCTTCCCCGTAAGGGTTTTCACGAAAATCTGCATTTT 14707073
>seq434
Length=1819716
Score = 111 bits (122), Expect = 2e-19
Identities = 163/231 (71%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
||| || || | ||| | ||| ||||||| || || || || |||||||| || || |
Sbjct 1331281 ACCACCACGAAGTCTCAACACAAGATGAAGAGTAGACTCCTTCTGAATGTTATAGTCAGA 1331340
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
| || || | ||||| || |||||||| ||| | || || | ||||| || |||||
Sbjct 1331341 CAAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGG 1331400
Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395
||||||||| || || || || || ||||||| || | ||||| || || ||
Sbjct 1331401 AATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATCGTATCCGAGGGTTCAAC 1331460
Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446
|| | || | |||||| || || | ||||| |||||||| ||||||||
Sbjct 1331461 CTCGAGGGTGATGGTCTTCCCTGTAAGGGTTTTCACGAAAATCTGCATTTT 1331511
>seq181
Length=4179193
Score = 111 bits (122), Expect = 2e-19
Identities = 163/231 (71%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
||| || || | ||| | ||| ||||||| || || || || ||||||||||| || |
Sbjct 2580466 ACCACCACGAAGTCTCAACACAAGATGAAGAGTAGACTCCTTCTGAATGTTGTAGTCAGA 2580525
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
| || || | ||||| || |||||||| ||| | || || | ||||| || ||| |
Sbjct 2580526 CAAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGACG 2580585
Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395
||||||||| || || || || || ||||||| || | ||||| || || ||
Sbjct 2580586 AATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATCGTATCCGAGGGTTCAAC 2580645
Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446
|| | || | |||||| || || | ||||| |||||||| ||||||||
Sbjct 2580646 CTCGAGGGTGATGGTCTTCCCCGTAAGGGTTTTCACGAAAATCTGCATTTT 2580696
>seq72
Length=7750101
Score = 107 bits (118), Expect = 2e-18
Identities = 159/224 (71%), Gaps = 1/224 (0%)
Strand=Plus/Plus
Query 64224 GCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGC 64283
||| ||| | ||| ||||||| || || || || ||||||||||| || | | ||||
Sbjct 2355983 GCAGTCTCAACACAAGATGAAGAGTAGACTCCTTCTGAATGTTGTAGTCAGATAAAGTGC 2356042
Query 64284 GCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTT 64343
| | ||||| || |||||| ||| | || || | ||||| || |||||||||||||
Sbjct 2356043 GTCCATCTTCCAGTGTCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTT 2356102
Query 64344 CTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAG 64403
| || || || ||||| ||||||| || | ||||| || || || || | |
Sbjct 2356103 CCTTATCCTGGATTTTGGCCTTTACATTTTCTATCGTATCCGAGGGTTCAACCTCGAGGG 2356162
Query 64404 TTACGGTC-TTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446
| | |||| || || || | |||||| || ||||| ||||||||
Sbjct 2356163 TAATGGTCTTTCCCCGTAAGAGTTTTCACAAAAATCTGCATTTT 2356206
>seq407
Length=3256691
Score = 105 bits (116), Expect = 7e-18
Identities = 154/215 (72%), Gaps = 2/215 (1%)
Strand=Plus/Plus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
||||| || || | || || ||||| || |||||||| |||| || ||||| | ||
Sbjct 904234 AGCACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCTGAGAGCGTGCGGCCATCC 904293
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
|| ||||||| || |||| | || || ||||||||||| || || || || || || |||
Sbjct 904294 TCCAGCTGCTGGCTGGCAAATATCAGACGCTGCTGGTCAGGTGGGATACCCTCCTTGTCT 904353
Query 64352 TGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410
|| | |||| ||||| ||| ||| | || ||| || || || || | || | |||
Sbjct 904354 TG-AATTTTGGCTTTGACATTCTCAATGGTGTCATTGGGCTCGACCTCAAGGGTGATGGT 904412
Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTT 64445
|||||| || | || || || || || |||||||
Sbjct 904413 CTTGCCCGTGAGGGTCTTCACAAAGATCTGCATTT 904447
>seq411
Length=1958949
Score = 104 bits (114), Expect = 2e-17
Identities = 114/152 (75%), Gaps = 0/152 (0%)
Strand=Plus/Plus
Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306
||||| ||||| | ||||||||||| | | ||||| ||||||| |||||||||||
Sbjct 1209649 GTCGACTCTTTCCGGATGTTGTAATCAGAAAGAGTGCGGCCGTCTTCCAGCTGCTTGCCT 1209708
Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366
||| | ||||||| |||||||||||| || |||||||| || | || || || |||
Sbjct 1209709 GCAAAGATGAGCCTCTGCTGGTCGGGGGGGATTCCTTCCTTATGCTGGATCTTGGCCTTC 1209768
Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTC 64398
||| || | || |||| || ||||||||
Sbjct 1209769 ACATTTTCGATGGTGTCACTGGGCTCCACTTC 1209800
>seq38
Length=10264441
Score = 104 bits (114), Expect = 2e-17
Identities = 153/213 (72%), Gaps = 3/213 (1%)
Strand=Plus/Minus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
||||| || || | || || ||||| || |||||||| |||| || ||| | | ||
Sbjct 9540857 AGCACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCTGAGAGTGTGTGGCCATCC 9540798
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
|| ||||| ||||||||| | || || ||||||||||| || || || || || || |||
Sbjct 9540797 TCCAGCTGTTTGCCGGCAAATATCAGACGCTGCTGGTCAGGTGGGATACCCTCCTTGTCT 9540738
Query 64352 TGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410
|| | |||| ||||| ||| ||| | || |||| ||| || || || | || | |||
Sbjct 9540737 TG-AATTTTGGCTTTGACATTCTCAATGGTGTCACGGGC-TCGACCTCAAGGGTGATGGT 9540680
Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|||||| | | || || || || || |||||
Sbjct 9540679 CTTGCCCATGAGGGTCTTCACAAAGATCTGCAT 9540647
>seq292
Length=4239571
Score = 102 bits (112), Expect = 8e-17
Identities = 154/219 (70%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 64228 TCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGC 64287
||| | ||| ||||||| || || || || ||||| ||||| || | | ||||| |
Sbjct 2943972 TCTCAACACAAGATGAAGAGTAGACTCCTTCTGAATATTGTAGTCAGACAAAGTGCGTCC 2944031
Query 64288 GTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTT 64347
| ||| || | |||||| ||| | || || | ||||| || |||||||||||||| ||
Sbjct 2944032 ATATTCCAGTTCCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTT 2944091
Query 64348 TTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTAC 64407
|| || || || ||||||| || | ||||| || || || || | || |
Sbjct 2944092 ATCCTGGATCTTGACCTTTACATTTTCTATCGTATCCGAGGGTTCAACCTCGAGGGTGAT 2944151
Query 64408 GGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446
|||||| || || | ||||| |||||||| ||||||||
Sbjct 2944152 GGTCTTCCCCGTAAGGGTTTTCACGAAAATCTGCATTTT 2944190
>seq142
Length=5139840
Score = 102 bits (112), Expect = 8e-17
Identities = 161/231 (70%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
||| || || | ||| | ||| ||||||| || || || ||||||||||||| ||
Sbjct 3725167 ACCACCACGAAGTCTCAACACAAGATGAAGAGTAGACTCCCTTTGAATGTTGTAGTCAAA 3725226
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
| || || |||||| || |||||||| ||| | || || | ||||| | |||||
Sbjct 3725227 CAAAGTACGTCTGTCTTCCAGTTGCTTGCCAGCAAAGATCAGTCCTTGCTGACCAGGAGG 3725286
Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395
||||||||| || || || || || ||||||| || | ||||| || || ||
Sbjct 3725287 AATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATCGTATCCGAGGGTTCAAC 3725346
Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446
|| | | | |||||| || || | ||||| |||||||| ||||||||
Sbjct 3725347 CTCGAGGTTGATGGTCTTCCCTGTAAGGGTTTTCACGAAAATCTGCATTTT 3725397
>seq69
Length=11786368
Score = 102 bits (112), Expect = 8e-17
Identities = 161/231 (70%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
||| || || | ||| | ||| ||||||| || || || || ||||||||||| || |
Sbjct 9297238 ACCACCACGAAGTCTCAACACAAGATGAAGAGTAGACTCCTTCTGAATGTTGTAGTCAGA 9297179
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
| || | | ||||| || |||||||| ||| | || || | ||||| || |||||
Sbjct 9297178 CAAAGTACCTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGG 9297119
Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395
||| ||||| || ||||| || || ||||||| || ||||| || || ||
Sbjct 9297118 AATGCCTTCCTTATCTTGGATCTTGGCCTTTACATTTTCTGTAGTATCCAAGGGTTCAAC 9297059
Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446
|| | | | |||||| || || | ||||| |||||||| ||||||||
Sbjct 9297058 CTCGAGGTTGATGGTCTTCCCTGTAAGGGTTTTCACGAAAATCTGCATTTT 9297008
>seq1
Length=21314971
Score = 100 bits (110), Expect = 3e-16
Identities = 152/213 (71%), Gaps = 4/213 (2%)
Strand=Plus/Minus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
||||| || || | || || ||||| || |||||||| |||| || ||||| | ||
Sbjct 18631141 AGCACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCTGAGA--GTGCGGCCATCC 18631084
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
|| ||||| || || ||| | || || ||||||||||| || || || ||||| || | |
Sbjct 18631083 TCCAGCTGTTTACCAGCAAATATCAGACGCTGCTGGTCAGGTGGGATACCTTCCTTGTAT 18631024
Query 64352 TGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410
|| | |||| ||||| ||| || | || |||| || || || || | || | |||
Sbjct 18631023 TG-AATTTTGGCTTTGACATTCTTAATGGTGTCACTGGGCTCGACCTCAAGGGTGATGGT 18630965
Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|||||| || | ||| || || || || |||||
Sbjct 18630964 CTTGCCCGTGACAGTCTTCACAAAGATCTGCAT 18630932
Score = 86.0 bits (94), Expect = 6e-12
Identities = 132/186 (71%), Gaps = 2/186 (1%)
Strand=Plus/Minus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
||||| || || | | || ||||| || |||||||| |||| || |||| | ||
Sbjct 4712576 AGCACCAGGTGCAGGTTGGACTCTTTCTGGATGTTGTAGTCTGAGAGCGTGCAGCCATCC 4712517
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
|| ||||| ||||||||| | || || ||||||||||| || || || | || || |||
Sbjct 4712516 TCCAGCTGTTTGCCGGCAAACATCAGACGCTGCTGGTCAGGTGGGATAGCCTCCTTGTCT 4712457
Query 64352 TGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410
|| | |||| ||||| ||| ||| || |||| || || || || | || | |||
Sbjct 4712456 TG-AATTTTGGCTTTGACATTCTCAGTGGTGTCACTGGGCTCGACCTCAAGGGTGATGGT 4712398
Query 64411 CTTGCC 64416
||||||
Sbjct 4712397 CTTGCC 4712392
>seq63
Length=8132274
Score = 98.7 bits (108), Expect = 1e-15
Identities = 153/219 (70%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 64228 TCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGC 64287
||| | ||| ||||||| || || || || ||||||||||| || | | || || |
Sbjct 6710345 TCTCAACACAAGATGAAGAGTAGACTCCTTCTGAATGTTGTAGTCAGACAAAGTACGTCC 6710404
Query 64288 GTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTT 64347
|||| || |||||||| ||| | || || | ||||| || |||||||||||||| ||
Sbjct 6710405 ACCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTT 6710464
Query 64348 TTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTAC 64407
|| || | || ||||||| || | ||||| || || || || | || |
Sbjct 6710465 ATCCTGGACCTTGGTCTTTACATTTTCTATCGTATCCGAGGGTTCAACCTCGAGGGTGAT 6710524
Query 64408 GGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446
|||||| || | | ||||| |||||||| ||||||||
Sbjct 6710525 GGTCTTCCCCATAAGGGTTTTCACGAAAATCTGCATTTT 6710563
>seq25
Length=15232693
Score = 96.9 bits (106), Expect = 3e-15
Identities = 113/153 (74%), Gaps = 0/153 (0%)
Strand=Plus/Plus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
||| || || | ||| ||||| ||||||| || || || |||||||||||||| || |
Sbjct 12145240 ACCACCACGAAGTCTCAGCACCAGATGAAGAGTAGACTCCTTTTGAATGTTGTAGTCAGA 12145299
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
| || | | ||||| || |||||||| ||||| || || | ||||| || |||||
Sbjct 12145300 CAGAGTACATCCATCTTCTAGTTGCTTGCCAGCATAGATCAGTCTTTGCTGATCAGGAGG 12145359
Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTAC 64368
||||||||| || || || || || ||||||
Sbjct 12145360 AATTCCTTCCTTATCCTGGATCTTGGCCTTTAC 12145392
>seq19
Length=20362211
Score = 95.1 bits (104), Expect = 1e-14
Identities = 106/142 (75%), Gaps = 0/142 (0%)
Strand=Plus/Minus
Query 64228 TCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGC 64287
||| | ||| ||||||| || | || |||||||||||||| || | | || || |
Sbjct 6160560 TCTCAACACAAGATGAAGAGTAAACTCCTTTTGAATGTTGTAGTCAGACAAAGTACGTCC 6160501
Query 64288 GTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTT 64347
|||||| || |||||||| ||| | || || | ||||| || |||||||||||||||||
Sbjct 6160500 GTCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCTTT 6160441
Query 64348 TTCTTGTATTTTTTGCTTTACA 64369
|| || || || |||||||
Sbjct 6160440 ATCCTGGATCTTGGCCTTTACA 6160419
>seq290
Length=2922102
Score = 91.5 bits (100), Expect = 1e-13
Identities = 158/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
||| || || | ||| | ||| ||||||| | || || |||||||||||||| || |
Sbjct 1757540 ACCACCACGAAGTCTCAACACAAGATGAAGAATAGACTCCTTTTGAATGTTGTAGTCAGA 1757599
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
| || | | ||||| || |||||||| ||| | || |||| ||||| || |||
Sbjct 1757600 CAAAGTACATCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGCCTTTGCTGATCACAAGG 1757659
Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395
|||||||||||| || || || || ||||||| || | ||||| | || |
Sbjct 1757660 AATTCCTTCTTTATCCTGGATCTTGGACTTTACATTTTCTATCGTATCCGAAGGTTCAGC 1757719
Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTT 64445
|| | || | |||||| || | | ||||| || ||||| |||||||
Sbjct 1757720 CTCGAGGGTGATGGTCTTCCCCATAAGGGTTTTCACAAAAATCTGCATTT 1757769
>seq828
Length=339631
Score = 86.0 bits (94), Expect = 6e-12
Identities = 139/200 (70%), Gaps = 0/200 (0%)
Strand=Plus/Minus
Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306
|| || ||||| || |||||||| || | | |||| | ||||| |||||||||||
Sbjct 9765 GTAGACTCTTTCTGGATGTTGTAGTCAGAAAGAGTGCTGCCATCTTCCAGCTGCTTGCCT 9706
Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366
||| | ||||||| ||||||||| | || || ||||| | || || || || |||
Sbjct 9705 GCAAAGATGAGCCTCTGCTGGTCACGGGGGATGCCTTCCTAATCCTGGATCTTGGTCTTC 9646
Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426
||| || | || |||| || ||||| || | || |||||||| ||| ||
Sbjct 9645 ACATATTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGGTGGTCTTGCTGGTGGGGGTC 9586
Query 64427 TTTACGAAAATTTGCATTTT 64446
|| ||||| | ||||||||
Sbjct 9585 TTCACGAAGACCTGCATTTT 9566
>seq93
Length=13160294
Score = 86.0 bits (94), Expect = 6e-12
Identities = 104/142 (73%), Gaps = 0/142 (0%)
Strand=Plus/Plus
Query 64228 TCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGC 64287
||| | ||| ||||||| || || || |||||||||||||| || | | || | |
Sbjct 4738355 TCTCAACACAAGATGAAGAGTAGACTCCTTTTGAATGTTGTAGTCAGGCAAAGTACAACC 4738414
Query 64288 GTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTT 64347
||||| || |||||||| ||| | || || | ||||| || |||||||||||||| ||
Sbjct 4738415 ATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTT 4738474
Query 64348 TTCTTGTATTTTTTGCTTTACA 64369
|| || || || |||||||
Sbjct 4738475 ATCCTGGATCTTGGCCTTTACA 4738496
>seq276
Length=3089952
Score = 84.2 bits (92), Expect = 2e-11
Identities = 146/213 (69%), Gaps = 7/213 (3%)
Strand=Plus/Minus
Query 64234 CACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTC 64293
||| ||||||| || || || || |||||||| || || | | || | |||
Sbjct 1638085 CACAAGATGAAGAGTAGACTCCTTCTGAATGTTATAGTCAGACAAAGTCC-------TTC 1638033
Query 64294 AAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTG 64353
|| |||||||| ||| | || || | ||||| || |||||||||||||| || || ||
Sbjct 1638032 CAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATCCTG 1637973
Query 64354 TATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTT 64413
|| || ||||||| || | |||||| || || || || | || | ||||||
Sbjct 1637972 GATCTTGGCCTTTACATTTTCTATTGTATCTGAGGGTTCAACCTCAAGGGTGATGGTCTT 1637913
Query 64414 GCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446
|| | | ||||| | |||||| ||||||||
Sbjct 1637912 CCCCATAAGGGTTTTCATGAAAATCTGCATTTT 1637880
>seq525
Length=1360352
Score = 82.4 bits (90), Expect = 8e-11
Identities = 121/168 (72%), Gaps = 4/168 (2%)
Strand=Plus/Plus
Query 64280 GTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATT 64339
|| ||| | ||||| || |||||||| ||| | || || | ||||| || |||||||||
Sbjct 72219 GTACGCCCCTCTTCCAGTTGCTTGCCAGCAAAGATCAGTC--TGCTGATCAGGAGGAATT 72276
Query 64340 CCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCG-TCCACTTC 64398
||||| | || || || || ||||||| || | ||||| | ||| || || ||
Sbjct 72277 CCTTCCTGATCCTGGATCTTGGCCTTTACATTTTCTATGGTATC-CGAGCGTTCAACCTC 72335
Query 64399 TACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446
| || ||||||| || || | ||||| |||||||| ||||||||
Sbjct 72336 GAGGGTGGCGGTCTTCCCCGTAAGTGTTTTCACGAAAATCTGCATTTT 72383
>seq404
Length=2013455
Score = 82.4 bits (90), Expect = 8e-11
Identities = 143/208 (69%), Gaps = 10/208 (5%)
Strand=Plus/Plus
Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306
||||| ||||| || |||||||| || | | |||||| | |||| || |||||||
Sbjct 951945 GTCGACTCTTTCTGGATGTTGTAGTCAG--AAGGTGCGGCCATCTTTCAGTGGCTTGCCT 952002
Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGA--------ATTCCTTCTTTTTCTTGTATTT 64358
||| ||||||||| |||||| ||||| || || ||| | || || || || |
Sbjct 952003 GCAAAAATGAGCCTCTGCTGTTCGGGGGGGTGGGGGGGATGCCTCCCTTATCCTGGATCT 952062
Query 64359 TTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGG 64418
| ||| ||| | || || |||| | ||||| || | || | ||||||||||
Sbjct 952063 TGGCCTTCACATTTTACATGGTGTCACTAGGCTCCACCTCCAGGGTGATTGTCTTGCCGG 952122
Query 64419 TCAAAGTTTTTACGAAAATTTGCATTTT 64446
||| || || || || || ||||||||
Sbjct 952123 TCAGGGTCTTCACAAACATCTGCATTTT 952150
>seq259
Length=3196918
Score = 82.4 bits (90), Expect = 8e-11
Identities = 150/219 (68%), Gaps = 2/219 (1%)
Strand=Plus/Plus
Query 64228 TCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGC 64287
||| | ||| ||||||| || || || ||||||| ||||| || | | || || |
Sbjct 1224756 TCTCAACACAAGATGAAGAGTAGACTCCTTTTGAACATTGTAGTCGGACAAAGTACGTCC 1224815
Query 64288 GTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTT 64347
||||| |||||||||| ||| | || || | ||||| || |||||||||||||| |
Sbjct 1224816 ATCTTCCAGCTGCTTGCTAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTC 1224875
Query 64348 TTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTAC 64407
|| || ||| | ||||||| || | |||| || | || || | || |
Sbjct 1224876 ATCCTGGATTGTGGCCTTTACATTTTCTATCTTATCCGAGGGTTTGACCTCGAGGGTGAT 1224935
Query 64408 GGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446
|||||| || | | ||||| ||||||| ||||||||
Sbjct 1224936 GGTCTTCCCCCTAAGGGTTTTCACGAAAA--TGCATTTT 1224972
>seq64
Length=8039362
Score = 82.4 bits (90), Expect = 8e-11
Identities = 107/148 (72%), Gaps = 0/148 (0%)
Strand=Plus/Minus
Query 64220 CCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACG 64279
|| || | ||| | ||| ||||||| || || || || ||||||||||| || | |
Sbjct 5682514 CCACGAAGTCTCAACACAAGATGAAGAGTAGACTCCTTCTGAATGTTGTAGTCAGACAAA 5682455
Query 64280 GTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATT 64339
|| || | ||||| || |||||||| ||| | || || | ||||| || |||||||||
Sbjct 5682454 GTACGTCCATCTTCCAGTTGCTTGCCAGCAGAGATCAGTCTTTGCTGATCAGGAGGAATT 5682395
Query 64340 CCTTCTTTTTCTTGTATTTTTTGCTTTA 64367
||||| || || || || || |||||
Sbjct 5682394 CCTTCCTTATCCTGGATCTTGGCCTTTA 5682367
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 499600106772640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |