Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cebus_20capucinus_20imitator_20[refseq_20GCF_5F001604975.1_202016-
04-04] 7,156 sequences; 2,717,703,182 total letters
Query= NC_015960.1
Length=175699
Score E
Sequences producing significant alignments: (Bits) Value
seq526 360 2e-94
seq630 291 9e-74
seq494 145 9e-30
seq867 143 3e-29
seq28 134 2e-26
seq2 129 7e-25
seq57 102 9e-17
seq80 98.7 1e-15
>seq526
Length=1402496
Score = 360 bits (398), Expect = 2e-94
Identities = 629/907 (69%), Gaps = 10/907 (1%)
Strand=Plus/Plus
Query 18612 TTAAAAATCAACATCCAAAGAAAAAGAATTCTCTTCATTAGAATT--CATTACTCCCATT 18669
||| |||||| || |||| | ||||||||||||| || || || ||| ||||||||
Sbjct 113333 TTAGAAATCAGCACCCAAGGTAAAAGAATTCTCTG--TTGGACTTGACATCACTCCCATC 113390
Query 18670 TTTTGATATTCGGCAACTCTTTTTTCAAAGAAATTAGTTTTTCCCTCTAATGATATACAT 18729
| ||||| ||| | ||||| || |||||||| ||||| ||||| || | ||| |||
Sbjct 113391 CTCTGATACTCGCCTACTCTCTTCTCAAAGAAGTTAGTCTTTCCTTCCAGTGAAATATTC 113450
Query 18730 TCCATAAAATCAAATGGATTTTTTACATTATATAtttttttGAATCCTAATTCTAATAGT 18789
|||||||| ||||||||||| | || | | | || | || || | ||| | |
Sbjct 113451 TCCATAAAGTCAAATGGATTCTCTATTCTGAAAACCTTGCTAAAACCCAGTTCCAGCAT- 113509
Query 18790 AGTCTATCCGCTACAAATTTAATATATGTGTTCATCATATCACAATTCATTCCTATTAAT 18849
|||| || || ||||| | ||| ||| ||||| | | |||||||| || || |
Sbjct 113510 -GTCTGTCTGCCACAAACTCAATGTATTGCTTCATTAGAGTGCAATTCATCCCAATGAGC 113568
Query 18850 TTAACAGGTAGTGCATCTGTAAGAAATTCTTGTTCTATATTTACTGCCTCTGATA-TAAT 18908
| ||||| | || || |||||||| ||||||||||| || || | ||||| | ||
Sbjct 113569 TCCACAGGCAAGGCCTCAGTAAGAAACTCTTGTTCTATCCGAACAGCAT-TGATAGTTAT 113627
Query 18909 AGATACAACTCTATCTTCATTAGGAGGGTATAGAAGATGTTTAAACATCAAACATGCAAA 18968
| ||||| || || || || || || ||||| ||||||| || |||||
Sbjct 113628 TTCTCTTACTCTCTCCTCTGATGGTTTGTGTACTAGGTGTTTGAACATCAGGCAAGCAAA 113687
Query 18969 ATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAACCAGGCAT 19028
|| | |||| ||||| ||||| || | | |||| ||||||||| | ||||||||
Sbjct 113688 ATGTGAGTGTAAACCCTCATCTCTGCTAAAAAGGTCATGAGAAAATGTGAGGCCAGGCAT 113747
Query 19029 CAGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAATATACCTTC 19088
|||||||| ||| || | ||||||||| || ||||| || ||||||||| | || |||||
Sbjct 113748 CAGTCCTCATTTCTTGAGCCAGAATATGGATGCAAAAGAACCAGAAAAGTAGATGCCTTC 113807
Query 19089 TACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTAGCATCATTATTATGAATCCATTT 19148
||||| ||||| || || | | ||| ||||| |||| || || | ||||||
Sbjct 113808 CACTGCAGCAAAGGCTACAACGCGTTCACCATAGGTAGCCTCTTTGTCCCCAATCCAGCG 113867
Query 19149 CAGTGCCCAATCAGCCTTCTTTTTTACACATGGCATTGTCTCTATAGAATTAAATAGATA 19208
|| |||||||| |||||||| || ||||| ||||| || || || | ||| || ||| |
Sbjct 113868 CAAGGCCCAATCTGCCTTCTTGTTGACACAAGGCATCGTTTCAATGGCATTGAAGAGAAA 113927
Query 19209 CATACGCTCATCTGTATCTTTAACATATGCATCTATCAATAAACTGTACATTTCTGAATG 19268
| |||| | |||||| | || | || || | | || |||||||| |||||
Sbjct 113928 TTCCCTTTCATTGGGATCTTTTATGTAAGTGTCGATAAGGAGACCATACATTTCAGAATG 113987
Query 19269 AATATTTTCTATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCTGTTATCTGTACTTC 19328
|| ||||| || || || || || || || ||||| | ||||||| ||||| | |||
Sbjct 113988 TATGTTTTCCATGGCAATTTGGAAGCCATAGAAACAGCAGCCTTCTGTAATCTGAAGTTC 114047
Query 19329 ACTACAAAATCTTTCGACCAAATTTTCATTAACTATTCCATCACTAGCTGCAAAAAATGC 19388
| ||||| || ||||| |||||||| ||||| |||||||| ||||||| || ||
Sbjct 114048 TTGGCTAAATCGCTCCACCAAGTTTTCATTTACTATGCCATCACTTGCTGCAAGGAAAGC 114107
Query 19389 TAATACATGTTTAATAAAATGTTTTTCATCTGAGGTTAATGTATT-CCAATCATTAATAT 19447
| || || ||||| | | | || || | | || | | ||| ||| | || |
Sbjct 114108 CAGAACGTGAGATATAAAGTATCTCTCCTCAG-GCTTCAGGGATTCCCAGTGCCGTATGT 114166
Query 19448 CTTTAGATAAATCTACTTCTTCAACTGTCCAAAAAGAAGCCTCTGCTTTTTTATACATGT 19507
| || || | ||||| || ||| | |||| || || || || || || |||| ||| |
Sbjct 114167 CCTTGGACAGGTCTACCTCCTCAGCGCTCCAGAAGGAGGCGTCCGCCTTCTTATGCATCT 114226
Query 19508 TCCATAT 19514
||| ||
Sbjct 114227 GCCAGAT 114233
>seq630
Length=879232
Score = 291 bits (322), Expect = 9e-74
Identities = 540/786 (69%), Gaps = 31/786 (4%)
Strand=Plus/Plus
Query 18612 TTAAAAATCAACATCCAAAGAAAAAGAATTCTCTTCATTAGAATT--CATTACTCCCATT 18669
||| || ||| ||||||| ||||||||||||| | || || || ||||||||
Sbjct 417479 TTAGAAGTCAGCATCCAAGATAAAAGAATTCTCTG--TGGGACTTGACACCACTCCCATC 417536
Query 18670 TTTTGATATTCGGCAACTCTTTTTTCAAAGAAATTAGTTTTTCCCTCTAATGATATACAT 18729
| | || || | ||||| || |||||||| ||| | ||||| || | || |||
Sbjct 417537 CTCTAATGCTCACCTACTCTCTTCTCAAAGAAGTTAATCTTTCCTTCCAGTGGAATATTC 417596
Query 18730 TCCATAAAATCAAATGGATTTTTTACATTATATAtttttttGAATCCTAATTCTAATAGT 18789
|||||||| ||||||||||| | ||| | | | || | || || | ||| | |
Sbjct 417597 TCCATAAAGTCAAATGGATTCTCTACTCTGAAAACCTTGCTAAAACCCAGTTCCAGCATA 417656
Query 18790 AGTCTATCCGCTACAAATTTAATATATGTGTTCATCATATCACAATTCATTCCTATTAAT 18849
||||| || || ||||| | ||| ||| ||||| | | |||||||| || || |
Sbjct 417657 AGTCTGTCTGCCACAAACTCAATGTATTGCTTCATTAGAGTGCAATTCATCCCAATGAGC 417716
Query 18850 TTAACAGGTAGTGCATCTGTAAGAAATTCTTGTTCTATATTTACTGCCTCTGATATAATA 18909
|| ||||| | || || || || || |||||||| || || | ||||| ||
Sbjct 417717 TTCACAGGCAAGATCTCAGTGAGGAACTCCTGTTCTATCCGAACAGCAT-TGATA--AT- 417772
Query 18910 GATACAACTCTATCTTCAT--TAGGAGGGTAT----AGAAGATGTTTAAACATCAAACAT 18963
|| |||| ||| | | || ||| | | || |||| ||||||| ||
Sbjct 417773 --TATTTCTCTTTCTCCCGGCTCTGATGGTTTGTGTACTAGGTGTTGGAACATCAGGCAA 417830
Query 18964 GCAAAATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAACCA 19023
||||||||||| |||| ||||| ||||| || | | ||||||||||||||| | |||
Sbjct 417831 GCAAAATCACAGTGTAAACCCTCATCTCTGCTAAAAAGTTCATTAGAAAATGTGAGGCCA 417890
Query 19024 GGCATCAGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAATATA 19083
||||||||||||| ||| || | ||||||||| ||||| || || ||||||||||| |
Sbjct 417891 GGCATCAGTCCTCGTTTCTTAAGCCAGAATATGGAAGCTAAAGAACCAGAAAAGAAGACG 417950
Query 19084 CCTTCTACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTAGCATCATTATTATGAATC 19143
||||| ||||| ||||| ||| ||| ||||| |||| || || | ||||
Sbjct 417951 CCTTCCACTGCAGCAAAGGCA-------GTTCACCATAGGTAGCCTCTTTGTCCCCAATC 418003
Query 19144 CATTTCAGTGCCCAATCAGCCTTCTTTTTTACACATGGCATTGTCTCTATAGAATTAAAT 19203
|| || |||| || |||||||| || ||||| ||||| || || || | ||| ||
Sbjct 418004 CAGCGCAAGGCCCGGTCTGCCTTCTTCTTGACACAAGGCATCGTTTCAATGGCATTGAAG 418063
Query 19204 AGATA----CATACGCTCATCTGTATCTTTAACATATGCATCTATCAATAAACTGTACAT 19259
||| | | | |||| | |||||| | ||| | || | | | ||| |||||
Sbjct 418064 AGAAATTCCCTTTCGCT----GGGATCTTTTATATACGTGTCAGTAAGGAGACTATACAT 418119
Query 19260 TTCTGAATGAATATTTTCTATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCTGTTAT 19319
||| ||||| || || || || | || || ||||| || ||||| | || ||||| ||
Sbjct 418120 TTCAGAATGTATGTTGTCCATGCCAATTTGGAATCCATAGAAACAGCGGGCCTCTGTAAT 418179
Query 19320 CTGTACTTCACTACAAAATCTTTCGACCAAATTTTCATTAACTATTCCATCACTAGCTGC 19379
||| ||||| | ||||| || ||||| |||||||| ||||| || ||||| |||||
Sbjct 418180 CTGAACTTCTTGGCTAAATCGCTCCACCAAGTTTTCATTTACTATGCCGTCACTTGCTGC 418239
Query 19380 AAAAAA 19385
||| ||
Sbjct 418240 AAAGAA 418245
>seq494
Length=1524325
Score = 145 bits (160), Expect = 9e-30
Identities = 360/541 (67%), Gaps = 8/541 (1%)
Strand=Plus/Minus
Query 18982 CCCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAACCAGGCATCAGTCCTCttttt 19041
||||| | || || || | |||||| ||||||| | |||| |||||||| | |||
Sbjct 780065 CCCTCATAACTGCTAATAAGTTCATTTAAAAATGTGAGGCCAGACATCAGTCATGGTTTC 780006
Query 19042 tttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAATATACCTTCTACTGCTGCAAAA 19101
|| ||||||||||| || ||||| || || ||| |||| | |||||||||| |||||
Sbjct 780005 TTGAACCAGAATATCGATGCAAAAGAACCGGAAGAGAAGGTGCCTTCTACTGTGGCAAAG 779946
Query 19102 GCAACTAGTCTTTCTCCATAACTAGCATCATTATTATGAATCCATTTCAGTGCCCAATCA 19161
|| | | | |||||| | || |||| || || |||||| || |||||||
Sbjct 779945 GCTGCAACACGTTCTCCGTGGGTAACATCTTTGTTCACAATCCAACACAAGGCCCAATTT 779886
Query 19162 GCCTTCTTTTTTACACATGGCATTGTCTCTATAGAATTAAATAGATACATACGCTCATCT 19221
|||| ||| || |||| ||||| | || || | ||| || ||| || | || | |
Sbjct 779885 GCCTGCTTCTTGACACTAGGCATCCTTTCAATGGCATTGAAGAGAAAC-TCTCTTCCTTT 779827
Query 19222 G-TATCTTTAACATATGCATCTATCAATAAACTGTACATTTCTGAATGAATATTTTCTAT 19280
| | |||||||||| || || | || | | | | ||| || |||| || ||||| ||
Sbjct 779826 GTTGTCTTTAACATGTG--TCAGTAAAGATATTATCCATGTCAGAATAGATGTTTTCCAT 779769
Query 19281 AGCCATCTGAAATCCGTAAAAACATCTTGCTTCTGTTATCTGTACTTCACTACAAAATCT 19340
||| || || || || | || || | |||||| || ||||| ||
Sbjct 779768 AGCAATTTGGAAGCCATTGAAGCA---GGTTTCTGTAGCCTCAACTTCTTGGACGCATTG 779712
Query 19341 TTCGACCAAATTTTCATTAACTATTCCATCACTAGCTGCAAAAAATGCTAATACATGTTT 19400
|| ||||| |||| || |||||| ||||| | |||||||| || | | | |||
Sbjct 779711 CTCCACCAAGTTTTTATCAACTATGCCATCGCATGCTGCAAAGAAAGTCAGAATATGGGA 779652
Query 19401 AATAAAATGTTTTTCATCTGAGGTTAATGTATTCCAATCATTAATATCTTTAGATAAATC 19460
||||||| | |||| || | | | | | ||||| | ||| ||||| || | |
Sbjct 779651 TATAAAATATCTTTCCTCAGTCTTCAGAGCTTCCCAATGCTGAATGTCTTTGGACAGGCC 779592
Query 19461 TACTTCTTCAACTGTCCAAAAAGAAGCCTCTGCTTTTTTATACATGTTCCATATATCACG 19520
|| || | | |||| || ||| |||| |||| ||||| || ||||| |||||| |
Sbjct 779591 CACCTCCTGGGCCATCCAGAAGGAAATCTCTACTTTCTTATA-ATTTTCCAAATATCATG 779533
Query 19521 A 19521
|
Sbjct 779532 A 779532
Score = 84.2 bits (92), Expect = 2e-11
Identities = 91/119 (76%), Gaps = 4/119 (3%)
Strand=Plus/Plus
Query 18609 TGGTTAAAAATCAACATCCAAAGAAAAAGAATTCTCTTCATTAGAATT--CATTACTCCC 18666
|| ||| || ||| ||||||||| ||||||||| ||| ||| | || ||| ||| ||
Sbjct 779250 TGTTTAGAAGTCAGCATCCAAAGTAAAAGAATTATCT--ATTTTACTTGACATCACTGCC 779307
Query 18667 ATTTTTTGATATTCGGCAACTCTTTTTTCAAAGAAATTAGTTTTTCCCTCTAATGATAT 18725
|| ||||||||||| | ||||| || |||||||| ||| | ||||| || | ||| ||
Sbjct 779308 ATCTTTTGATATTCACCTACTCTCTTCTCAAAGAACTTAATCTTTCCTTCCAGTGAAAT 779366
>seq867
Length=266704
Score = 143 bits (158), Expect = 3e-29
Identities = 265/384 (69%), Gaps = 6/384 (2%)
Strand=Plus/Minus
Query 18612 TTAAAAATCAACATCCAAAGAAAAAGAATTCTCTTCATTAGAATT--CATTACTCCCATT 18669
||| || ||| ||||||| | |||| |||||||| || || || ||| ||||||||
Sbjct 180930 TTAGAAGTCAGCATCCAAGGTAAAATAATTCTCTG--TTGGACTTGACATCACTCCCATC 180873
Query 18670 TTTTGATATTCGGCAACTCTTTTTTCAAAGAAATTAGTTTTTCCCTCTAATGATATACAT 18729
| ||||| || | ||||| ||||||||||| ||||| ||||| || | ||| |||
Sbjct 180872 CTCTGATACTCACCTACTCTCTTTTCAAAGAAGTTAGTCTTTCCTTCCAGTGAAATATTC 180813
Query 18730 TCCATAAAATCAAATGGATTTTTTACATTATATAtttttttGAATCCTAATTCTAATAGT 18789
|||||||| ||||||||||| | ||| | | | || | || || |||| | |
Sbjct 180812 TCCATAAAGTCAAATGGATTCTCTACTCTGAAAACCTTGCTAAAACCCGATTCCAGCATA 180753
Query 18790 AGTCTATCCGCTACAAATTTAATATATGTGTTCATCATATCACAATTCATTCCTATTAAT 18849
|||||||| || ||||| | ||| ||| ||||| | | ||||||||||| || |
Sbjct 180752 AGTCTATCTGCCACAAACTCAATGTATTGCTTCATTAGAGTGCAATTCATTCCGATGAGC 180693
Query 18850 TTAACAGGTAGTGCATCTGTAAGAAATTCTTGTTCTATATTTACTGCCTCTGAT-ATAAT 18908
|| ||||| || || || || || || |||||||| || || | |||| || ||
Sbjct 180692 TTCACAGGCGAGGCCTCAGTGAGGAACTCCTGTTCTATCCGAACAGCAT-TGATAATTAT 180634
Query 18909 AGATACAACTCTATCTTCATTAGGAGGGTATAGAAGATGTTTAAACATCAAACATGCAAA 18968
| ||||| || || || || || |||||||| |||| || || ||||
Sbjct 180633 TTCTCTTACTCTCTCCTCTGATGGTTTGTGTACTAGATGTTTGAACAACAGGCAAACAAA 180574
Query 18969 ATCACAATGTAGTCCCTCGTCTCT 18992
|||||| |||| ||| |||||
Sbjct 180573 ATCACAGTGTAAACCCGATTCTCT 180550
>seq28
Length=17023488
Score = 134 bits (148), Expect = 2e-26
Identities = 394/604 (65%), Gaps = 6/604 (1%)
Strand=Plus/Minus
Query 48211 TCATAAATATATCTGGTATCCAAAGAGCTATAAATAAATCCCTAGTTCTTAGTTCTTCAT 48270
|||| || | | ||| ||||||||||| ||| | ||| || | | ||||||| |
Sbjct 16623674 TCATGAAGAGAGCTGCAATCCAAAGAGC---AAAAAGATCTCTGGCACGCTGTTCTTCCT 16623618
Query 48271 TGCCACTATTCCTTTTAAGTTCAAGAAAGTCCATTATATCAGCATGCCATGGTTCTAAAT 48330
| | ||||| | || | |||| || || | || || |||||| || || | |
Sbjct 16623617 TTTCTATATTCTTCTTTAAATCAAAGAATTCAAAGATGTCTAAATGCCAAGGCTCCAGGT 16623558
Query 48331 ATATTGCCATTACACCTGGTCGTTTATTACCTCCTTGATCTATATATCTGGCAGTATTGT 48390
| || || | | | || || | || || | ||| |||| | ||||| || || ||||
Sbjct 16623557 AAATAGCAAATGCTCCAGGACACTTGTTCCTACCTCGATCCAGATATCAAGCTGTGTTGT 16623498
Query 48391 TATAAACTCTTAACATTGGGACAATACCATTTGATATACCATTGGTTCCCGAAATATAAC 48450
|||| ||||| | ||| | |||| ||||| || | ||||| || | | ||| || |
Sbjct 16623497 TATATACTCTCAGCATCAGTACAAGGCCATTGGAATTGCCATTCGTCTCAGCAATGTAGC 16623438
Query 48451 TTCCACTAGCTCTTATATTACTAATTGAAATACCTATACCACCTGCCATTTTAGATATTA 48510
| ||| |||| | ||| ||| | | || ||| || || || | |||||| || |
Sbjct 16623437 TGCCAGTAGCCCAAATACAACTCACAGCAACACCAATTCCTCCACCAGATTTAGAAATCA 16623378
Query 48511 GAGCACACCGTTTAAGGGTATCATAAATTCCTTCTATACTATCATCTATCATATTTAATA 48570
||| | | || || || |||||||| ||||| || || |||| | ||||| | | |
Sbjct 16623377 ATGCATATTGCTTTAGAGTGTCATAAATGCCTTCAATGCTGTCATATTTCATACTCAGAA 16623318
Query 48571 GAAAACAACTAGACATTTGCGGATGACAAGTTCCTGAATTAAATAATGTTGGAGATGCAT 48630
||||||| ||||| | ||| || || || | | || | ||||| || ||||
Sbjct 16623317 GAAAACAGCTAGAAAGTTGTGGGCAGTTGGTACCAACACTGAAGAGAGTTGGTGAAGCAT 16623258
Query 48631 GAATAAACCATTTCTCTG--ATAACAATTTATA-TGTTTCAATAACAGAATCTATATCCC 48687
|| ||||| | |||| | | || | | | | ||||||||| | ||| || ||
Sbjct 16623257 GAGTAAACTACCTCTCAGGAAGAAGATTGTCTGCTGTTTCAATTGCTACATCAATGTCTT 16623198
Query 48688 ATTGATGTATACCTATAGATACACGCATTAACATATATTGAGGTCTTTCAACAATTTTGT 48747
|| || || || | |||| | | ||| ||||||| | ||| ||||| | | |||
Sbjct 16623197 CTTTGTGGATTCCAACAGATGCTCTCATCAACATATGCCGTGGTATTTCAGCCACTTTTC 16623138
Query 48748 TATTTATTTTCAAAAGATATGATTTTTCCAATGTTTTAAAACCAAAATAGTTGTATGAAA 48807
||| |||||||| | ||| || || | ||||||||||| || ||||| || |
Sbjct 16623137 CATTGATTTTCAACAAATAAGACCACTCTAGCAACTTAAAACCAAAGTAATTGTAAGAGA 16623078
Query 48808 AGTC 48811
| ||
Sbjct 16623077 AATC 16623074
>seq2
Length=18007423
Score = 129 bits (142), Expect = 7e-25
Identities = 103/124 (83%), Gaps = 0/124 (0%)
Strand=Plus/Minus
Query 18983 CCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAACCAGGCATCAGTCCTCtttttt 19042
|||| ||||| || || | ||||||||||||||| | |||||||||||||||| ||| |
Sbjct 1941489 CCTCATCTCTGCTAATAAGTTCATTAGAAAATGTGAGGCCAGGCATCAGTCCTCGTTTCT 1941430
Query 19043 ttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAATATACCTTCTACTGCTGCAAAAG 19102
| | ||||||||| || ||||| || ||||||||||| || ||||||||||| ||||| |
Sbjct 1941429 TGAGCCAGAATATGGATGCAAAAGAACCAGAAAAGAAGATGCCTTCTACTGCAGCAAAGG 1941370
Query 19103 CAAC 19106
| ||
Sbjct 1941369 CTAC 1941366
Score = 109 bits (120), Expect = 6e-19
Identities = 113/146 (77%), Gaps = 4/146 (3%)
Strand=Plus/Minus
Query 18612 TTAAAAATCAACATCCAAAGAAAAAGAATTCTCTTCATTAGAATT--CATTACTCCCATT 18669
||| || ||| ||||||| | ||||||||||||| || || || ||| ||||||||
Sbjct 1943293 TTAGAAGTCAGCATCCAAGGTAAAAGAATTCTCTG--TTGGACTTGACATCACTCCCATC 1943236
Query 18670 TTTTGATATTCGGCAACTCTTTTTTCAAAGAAATTAGTTTTTCCCTCTAATGATATACAT 18729
| ||||| ||| | ||||| || |||||||| ||||| ||||| || | ||| |||
Sbjct 1943235 CTCTGATACTCGCCTACTCTCTTCTCAAAGAAGTTAGTCTTTCCTTCCAGTGAAATATTC 1943176
Query 18730 TCCATAAAATCAAATGGATTTTTTAC 18755
|||||||| ||||||||||| | |||
Sbjct 1943175 TCCATAAAGTCAAATGGATTCTCTAC 1943150
>seq57
Length=8566406
Score = 102 bits (112), Expect = 9e-17
Identities = 103/134 (77%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 18985 TCGTCTCTACTTATCAATTCATTAGAAAATGTTAAACCAGGCATCAGTCCTCtttttttt 19044
|| ||||| || || | |||||| ||||| || | || ||||| || ||||| || |||
Sbjct 1418657 TCATCTCTGCTGATGAGTTCATTGGAAAACGTGAGTCCTGGCATAAGACCTCTCTTCTTT 1418716
Query 19045 AACCAGAATATAGAAGCAAATGATCCAGAAAAGAATATACCTTCTACTGCTGCAAAAGCA 19104
| ||||||||||| |||||| ||||| || ||||| | |||||||| || || || ||
Sbjct 1418717 AGCCAGAATATAGCAGCAAAAGATCCTGAGAAGAAAACTCCTTCTACAGCAGCGAAGGCC 1418776
Query 19105 ACTAGTCTTTCTCC 19118
|| | |||||| ||
Sbjct 1418777 ACCACTCTTTCCCC 1418790
>seq80
Length=8459403
Score = 98.7 bits (108), Expect = 1e-15
Identities = 102/134 (76%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 47328 TGAAATTCTCCAGATAGTACTCTACGGCTATATATATTACTTGTATATGGTTCTATAGAT 47387
||||||||||| || | ||||| || |||| || || || || || ||||| |||||
Sbjct 1278104 TGAAATTCTCCTGACAAGACTCTGCGAGTATAGATGTTGCTGGTGTAAGGTTCAATAGAC 1278163
Query 47388 TCATTATTTCCAAAAATTTGAGCAGTTGATGCTGTAGGCATGGATGCAACTAATAAGCTA 47447
|||||||| || | || |||||||| || ||||||||||| | |||| | ||| ||
Sbjct 1278164 TCATTATTCCCCAGGATCTGAGCAGTGGAAGCTGTAGGCATCGGGGCAATAAGTAAACTG 1278223
Query 47448 TTTCTTACTCCATA 47461
||||||| |||||
Sbjct 1278224 TTTCTTATACCATA 1278237
Score = 93.3 bits (102), Expect = 5e-14
Identities = 122/169 (72%), Gaps = 0/169 (0%)
Strand=Plus/Plus
Query 47050 TCCATCCATAGAAATGCATACTAGTTAATTTAGAATAACTAGGTTCTGAAATATGAATAT 47109
|||| || ||||| ||||||||||| | ||| ||| |||| || | ||| || || |
Sbjct 1275313 TCCAGCCGTAGAAGTGCATACTAGTGAGTTTGCCATAGTTAGGCTCAGCAATGTGGATGT 1275372
Query 47110 TAAGAGATTGACTCTGATCAATAAATGCACCTCTATCAGCTGCCATATCTAAAATAACCC 47169
| | ||| || || |||||||| || |||||||| ||||| ||||| | | || |
Sbjct 1275373 TCAAAGACTGGCTTTGATCAATGAAAGCACCTCTCTCAGCAGCCATCTTGAGAACAGTTT 1275432
Query 47170 TTTGTGGTATCTCCCATACTGTTTTATAAATTTGTTTAATGTCTTCTGG 47218
| || | || ||||| || |||||||||| ||| || | ||| || ||
Sbjct 1275433 TCTGAGAGATTTCCCACACAGTTTTATAAAGTTGCTTCAGGTCATCAGG 1275481
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 562058519367840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |