Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cebus_20capucinus_20imitator_20[refseq_20GCF_5F001604975.1_202016- 04-04] 7,156 sequences; 2,717,703,182 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq526 360 2e-94 seq630 291 9e-74 seq494 145 9e-30 seq867 143 3e-29 seq28 134 2e-26 seq2 129 7e-25 seq57 102 9e-17 seq80 98.7 1e-15 >seq526 Length=1402496 Score = 360 bits (398), Expect = 2e-94 Identities = 629/907 (69%), Gaps = 10/907 (1%) Strand=Plus/Plus Query 18612 TTAAAAATCAACATCCAAAGAAAAAGAATTCTCTTCATTAGAATT--CATTACTCCCATT 18669 ||| |||||| || |||| | ||||||||||||| || || || ||| |||||||| Sbjct 113333 TTAGAAATCAGCACCCAAGGTAAAAGAATTCTCTG--TTGGACTTGACATCACTCCCATC 113390 Query 18670 TTTTGATATTCGGCAACTCTTTTTTCAAAGAAATTAGTTTTTCCCTCTAATGATATACAT 18729 | ||||| ||| | ||||| || |||||||| ||||| ||||| || | ||| ||| Sbjct 113391 CTCTGATACTCGCCTACTCTCTTCTCAAAGAAGTTAGTCTTTCCTTCCAGTGAAATATTC 113450 Query 18730 TCCATAAAATCAAATGGATTTTTTACATTATATAtttttttGAATCCTAATTCTAATAGT 18789 |||||||| ||||||||||| | || | | | || | || || | ||| | | Sbjct 113451 TCCATAAAGTCAAATGGATTCTCTATTCTGAAAACCTTGCTAAAACCCAGTTCCAGCAT- 113509 Query 18790 AGTCTATCCGCTACAAATTTAATATATGTGTTCATCATATCACAATTCATTCCTATTAAT 18849 |||| || || ||||| | ||| ||| ||||| | | |||||||| || || | Sbjct 113510 -GTCTGTCTGCCACAAACTCAATGTATTGCTTCATTAGAGTGCAATTCATCCCAATGAGC 113568 Query 18850 TTAACAGGTAGTGCATCTGTAAGAAATTCTTGTTCTATATTTACTGCCTCTGATA-TAAT 18908 | ||||| | || || |||||||| ||||||||||| || || | ||||| | || Sbjct 113569 TCCACAGGCAAGGCCTCAGTAAGAAACTCTTGTTCTATCCGAACAGCAT-TGATAGTTAT 113627 Query 18909 AGATACAACTCTATCTTCATTAGGAGGGTATAGAAGATGTTTAAACATCAAACATGCAAA 18968 | ||||| || || || || || || ||||| ||||||| || ||||| Sbjct 113628 TTCTCTTACTCTCTCCTCTGATGGTTTGTGTACTAGGTGTTTGAACATCAGGCAAGCAAA 113687 Query 18969 ATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAACCAGGCAT 19028 || | |||| ||||| ||||| || | | |||| ||||||||| | |||||||| Sbjct 113688 ATGTGAGTGTAAACCCTCATCTCTGCTAAAAAGGTCATGAGAAAATGTGAGGCCAGGCAT 113747 Query 19029 CAGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAATATACCTTC 19088 |||||||| ||| || | ||||||||| || ||||| || ||||||||| | || ||||| Sbjct 113748 CAGTCCTCATTTCTTGAGCCAGAATATGGATGCAAAAGAACCAGAAAAGTAGATGCCTTC 113807 Query 19089 TACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTAGCATCATTATTATGAATCCATTT 19148 ||||| ||||| || || | | ||| ||||| |||| || || | |||||| Sbjct 113808 CACTGCAGCAAAGGCTACAACGCGTTCACCATAGGTAGCCTCTTTGTCCCCAATCCAGCG 113867 Query 19149 CAGTGCCCAATCAGCCTTCTTTTTTACACATGGCATTGTCTCTATAGAATTAAATAGATA 19208 || |||||||| |||||||| || ||||| ||||| || || || | ||| || ||| | Sbjct 113868 CAAGGCCCAATCTGCCTTCTTGTTGACACAAGGCATCGTTTCAATGGCATTGAAGAGAAA 113927 Query 19209 CATACGCTCATCTGTATCTTTAACATATGCATCTATCAATAAACTGTACATTTCTGAATG 19268 | |||| | |||||| | || | || || | | || |||||||| ||||| Sbjct 113928 TTCCCTTTCATTGGGATCTTTTATGTAAGTGTCGATAAGGAGACCATACATTTCAGAATG 113987 Query 19269 AATATTTTCTATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCTGTTATCTGTACTTC 19328 || ||||| || || || || || || || ||||| | ||||||| ||||| | ||| Sbjct 113988 TATGTTTTCCATGGCAATTTGGAAGCCATAGAAACAGCAGCCTTCTGTAATCTGAAGTTC 114047 Query 19329 ACTACAAAATCTTTCGACCAAATTTTCATTAACTATTCCATCACTAGCTGCAAAAAATGC 19388 | ||||| || ||||| |||||||| ||||| |||||||| ||||||| || || Sbjct 114048 TTGGCTAAATCGCTCCACCAAGTTTTCATTTACTATGCCATCACTTGCTGCAAGGAAAGC 114107 Query 19389 TAATACATGTTTAATAAAATGTTTTTCATCTGAGGTTAATGTATT-CCAATCATTAATAT 19447 | || || ||||| | | | || || | | || | | ||| ||| | || | Sbjct 114108 CAGAACGTGAGATATAAAGTATCTCTCCTCAG-GCTTCAGGGATTCCCAGTGCCGTATGT 114166 Query 19448 CTTTAGATAAATCTACTTCTTCAACTGTCCAAAAAGAAGCCTCTGCTTTTTTATACATGT 19507 | || || | ||||| || ||| | |||| || || || || || || |||| ||| | Sbjct 114167 CCTTGGACAGGTCTACCTCCTCAGCGCTCCAGAAGGAGGCGTCCGCCTTCTTATGCATCT 114226 Query 19508 TCCATAT 19514 ||| || Sbjct 114227 GCCAGAT 114233 >seq630 Length=879232 Score = 291 bits (322), Expect = 9e-74 Identities = 540/786 (69%), Gaps = 31/786 (4%) Strand=Plus/Plus Query 18612 TTAAAAATCAACATCCAAAGAAAAAGAATTCTCTTCATTAGAATT--CATTACTCCCATT 18669 ||| || ||| ||||||| ||||||||||||| | || || || |||||||| Sbjct 417479 TTAGAAGTCAGCATCCAAGATAAAAGAATTCTCTG--TGGGACTTGACACCACTCCCATC 417536 Query 18670 TTTTGATATTCGGCAACTCTTTTTTCAAAGAAATTAGTTTTTCCCTCTAATGATATACAT 18729 | | || || | ||||| || |||||||| ||| | ||||| || | || ||| Sbjct 417537 CTCTAATGCTCACCTACTCTCTTCTCAAAGAAGTTAATCTTTCCTTCCAGTGGAATATTC 417596 Query 18730 TCCATAAAATCAAATGGATTTTTTACATTATATAtttttttGAATCCTAATTCTAATAGT 18789 |||||||| ||||||||||| | ||| | | | || | || || | ||| | | Sbjct 417597 TCCATAAAGTCAAATGGATTCTCTACTCTGAAAACCTTGCTAAAACCCAGTTCCAGCATA 417656 Query 18790 AGTCTATCCGCTACAAATTTAATATATGTGTTCATCATATCACAATTCATTCCTATTAAT 18849 ||||| || || ||||| | ||| ||| ||||| | | |||||||| || || | Sbjct 417657 AGTCTGTCTGCCACAAACTCAATGTATTGCTTCATTAGAGTGCAATTCATCCCAATGAGC 417716 Query 18850 TTAACAGGTAGTGCATCTGTAAGAAATTCTTGTTCTATATTTACTGCCTCTGATATAATA 18909 || ||||| | || || || || || |||||||| || || | ||||| || Sbjct 417717 TTCACAGGCAAGATCTCAGTGAGGAACTCCTGTTCTATCCGAACAGCAT-TGATA--AT- 417772 Query 18910 GATACAACTCTATCTTCAT--TAGGAGGGTAT----AGAAGATGTTTAAACATCAAACAT 18963 || |||| ||| | | || ||| | | || |||| ||||||| || Sbjct 417773 --TATTTCTCTTTCTCCCGGCTCTGATGGTTTGTGTACTAGGTGTTGGAACATCAGGCAA 417830 Query 18964 GCAAAATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAACCA 19023 ||||||||||| |||| ||||| ||||| || | | ||||||||||||||| | ||| Sbjct 417831 GCAAAATCACAGTGTAAACCCTCATCTCTGCTAAAAAGTTCATTAGAAAATGTGAGGCCA 417890 Query 19024 GGCATCAGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAATATA 19083 ||||||||||||| ||| || | ||||||||| ||||| || || ||||||||||| | Sbjct 417891 GGCATCAGTCCTCGTTTCTTAAGCCAGAATATGGAAGCTAAAGAACCAGAAAAGAAGACG 417950 Query 19084 CCTTCTACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTAGCATCATTATTATGAATC 19143 ||||| ||||| ||||| ||| ||| ||||| |||| || || | |||| Sbjct 417951 CCTTCCACTGCAGCAAAGGCA-------GTTCACCATAGGTAGCCTCTTTGTCCCCAATC 418003 Query 19144 CATTTCAGTGCCCAATCAGCCTTCTTTTTTACACATGGCATTGTCTCTATAGAATTAAAT 19203 || || |||| || |||||||| || ||||| ||||| || || || | ||| || Sbjct 418004 CAGCGCAAGGCCCGGTCTGCCTTCTTCTTGACACAAGGCATCGTTTCAATGGCATTGAAG 418063 Query 19204 AGATA----CATACGCTCATCTGTATCTTTAACATATGCATCTATCAATAAACTGTACAT 19259 ||| | | | |||| | |||||| | ||| | || | | | ||| ||||| Sbjct 418064 AGAAATTCCCTTTCGCT----GGGATCTTTTATATACGTGTCAGTAAGGAGACTATACAT 418119 Query 19260 TTCTGAATGAATATTTTCTATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCTGTTAT 19319 ||| ||||| || || || || | || || ||||| || ||||| | || ||||| || Sbjct 418120 TTCAGAATGTATGTTGTCCATGCCAATTTGGAATCCATAGAAACAGCGGGCCTCTGTAAT 418179 Query 19320 CTGTACTTCACTACAAAATCTTTCGACCAAATTTTCATTAACTATTCCATCACTAGCTGC 19379 ||| ||||| | ||||| || ||||| |||||||| ||||| || ||||| ||||| Sbjct 418180 CTGAACTTCTTGGCTAAATCGCTCCACCAAGTTTTCATTTACTATGCCGTCACTTGCTGC 418239 Query 19380 AAAAAA 19385 ||| || Sbjct 418240 AAAGAA 418245 >seq494 Length=1524325 Score = 145 bits (160), Expect = 9e-30 Identities = 360/541 (67%), Gaps = 8/541 (1%) Strand=Plus/Minus Query 18982 CCCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAACCAGGCATCAGTCCTCttttt 19041 ||||| | || || || | |||||| ||||||| | |||| |||||||| | ||| Sbjct 780065 CCCTCATAACTGCTAATAAGTTCATTTAAAAATGTGAGGCCAGACATCAGTCATGGTTTC 780006 Query 19042 tttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAATATACCTTCTACTGCTGCAAAA 19101 || ||||||||||| || ||||| || || ||| |||| | |||||||||| ||||| Sbjct 780005 TTGAACCAGAATATCGATGCAAAAGAACCGGAAGAGAAGGTGCCTTCTACTGTGGCAAAG 779946 Query 19102 GCAACTAGTCTTTCTCCATAACTAGCATCATTATTATGAATCCATTTCAGTGCCCAATCA 19161 || | | | |||||| | || |||| || || |||||| || ||||||| Sbjct 779945 GCTGCAACACGTTCTCCGTGGGTAACATCTTTGTTCACAATCCAACACAAGGCCCAATTT 779886 Query 19162 GCCTTCTTTTTTACACATGGCATTGTCTCTATAGAATTAAATAGATACATACGCTCATCT 19221 |||| ||| || |||| ||||| | || || | ||| || ||| || | || | | Sbjct 779885 GCCTGCTTCTTGACACTAGGCATCCTTTCAATGGCATTGAAGAGAAAC-TCTCTTCCTTT 779827 Query 19222 G-TATCTTTAACATATGCATCTATCAATAAACTGTACATTTCTGAATGAATATTTTCTAT 19280 | | |||||||||| || || | || | | | | ||| || |||| || ||||| || Sbjct 779826 GTTGTCTTTAACATGTG--TCAGTAAAGATATTATCCATGTCAGAATAGATGTTTTCCAT 779769 Query 19281 AGCCATCTGAAATCCGTAAAAACATCTTGCTTCTGTTATCTGTACTTCACTACAAAATCT 19340 ||| || || || || | || || | |||||| || ||||| || Sbjct 779768 AGCAATTTGGAAGCCATTGAAGCA---GGTTTCTGTAGCCTCAACTTCTTGGACGCATTG 779712 Query 19341 TTCGACCAAATTTTCATTAACTATTCCATCACTAGCTGCAAAAAATGCTAATACATGTTT 19400 || ||||| |||| || |||||| ||||| | |||||||| || | | | ||| Sbjct 779711 CTCCACCAAGTTTTTATCAACTATGCCATCGCATGCTGCAAAGAAAGTCAGAATATGGGA 779652 Query 19401 AATAAAATGTTTTTCATCTGAGGTTAATGTATTCCAATCATTAATATCTTTAGATAAATC 19460 ||||||| | |||| || | | | | | ||||| | ||| ||||| || | | Sbjct 779651 TATAAAATATCTTTCCTCAGTCTTCAGAGCTTCCCAATGCTGAATGTCTTTGGACAGGCC 779592 Query 19461 TACTTCTTCAACTGTCCAAAAAGAAGCCTCTGCTTTTTTATACATGTTCCATATATCACG 19520 || || | | |||| || ||| |||| |||| ||||| || ||||| |||||| | Sbjct 779591 CACCTCCTGGGCCATCCAGAAGGAAATCTCTACTTTCTTATA-ATTTTCCAAATATCATG 779533 Query 19521 A 19521 | Sbjct 779532 A 779532 Score = 84.2 bits (92), Expect = 2e-11 Identities = 91/119 (76%), Gaps = 4/119 (3%) Strand=Plus/Plus Query 18609 TGGTTAAAAATCAACATCCAAAGAAAAAGAATTCTCTTCATTAGAATT--CATTACTCCC 18666 || ||| || ||| ||||||||| ||||||||| ||| ||| | || ||| ||| || Sbjct 779250 TGTTTAGAAGTCAGCATCCAAAGTAAAAGAATTATCT--ATTTTACTTGACATCACTGCC 779307 Query 18667 ATTTTTTGATATTCGGCAACTCTTTTTTCAAAGAAATTAGTTTTTCCCTCTAATGATAT 18725 || ||||||||||| | ||||| || |||||||| ||| | ||||| || | ||| || Sbjct 779308 ATCTTTTGATATTCACCTACTCTCTTCTCAAAGAACTTAATCTTTCCTTCCAGTGAAAT 779366 >seq867 Length=266704 Score = 143 bits (158), Expect = 3e-29 Identities = 265/384 (69%), Gaps = 6/384 (2%) Strand=Plus/Minus Query 18612 TTAAAAATCAACATCCAAAGAAAAAGAATTCTCTTCATTAGAATT--CATTACTCCCATT 18669 ||| || ||| ||||||| | |||| |||||||| || || || ||| |||||||| Sbjct 180930 TTAGAAGTCAGCATCCAAGGTAAAATAATTCTCTG--TTGGACTTGACATCACTCCCATC 180873 Query 18670 TTTTGATATTCGGCAACTCTTTTTTCAAAGAAATTAGTTTTTCCCTCTAATGATATACAT 18729 | ||||| || | ||||| ||||||||||| ||||| ||||| || | ||| ||| Sbjct 180872 CTCTGATACTCACCTACTCTCTTTTCAAAGAAGTTAGTCTTTCCTTCCAGTGAAATATTC 180813 Query 18730 TCCATAAAATCAAATGGATTTTTTACATTATATAtttttttGAATCCTAATTCTAATAGT 18789 |||||||| ||||||||||| | ||| | | | || | || || |||| | | Sbjct 180812 TCCATAAAGTCAAATGGATTCTCTACTCTGAAAACCTTGCTAAAACCCGATTCCAGCATA 180753 Query 18790 AGTCTATCCGCTACAAATTTAATATATGTGTTCATCATATCACAATTCATTCCTATTAAT 18849 |||||||| || ||||| | ||| ||| ||||| | | ||||||||||| || | Sbjct 180752 AGTCTATCTGCCACAAACTCAATGTATTGCTTCATTAGAGTGCAATTCATTCCGATGAGC 180693 Query 18850 TTAACAGGTAGTGCATCTGTAAGAAATTCTTGTTCTATATTTACTGCCTCTGAT-ATAAT 18908 || ||||| || || || || || || |||||||| || || | |||| || || Sbjct 180692 TTCACAGGCGAGGCCTCAGTGAGGAACTCCTGTTCTATCCGAACAGCAT-TGATAATTAT 180634 Query 18909 AGATACAACTCTATCTTCATTAGGAGGGTATAGAAGATGTTTAAACATCAAACATGCAAA 18968 | ||||| || || || || || |||||||| |||| || || |||| Sbjct 180633 TTCTCTTACTCTCTCCTCTGATGGTTTGTGTACTAGATGTTTGAACAACAGGCAAACAAA 180574 Query 18969 ATCACAATGTAGTCCCTCGTCTCT 18992 |||||| |||| ||| ||||| Sbjct 180573 ATCACAGTGTAAACCCGATTCTCT 180550 >seq28 Length=17023488 Score = 134 bits (148), Expect = 2e-26 Identities = 394/604 (65%), Gaps = 6/604 (1%) Strand=Plus/Minus Query 48211 TCATAAATATATCTGGTATCCAAAGAGCTATAAATAAATCCCTAGTTCTTAGTTCTTCAT 48270 |||| || | | ||| ||||||||||| ||| | ||| || | | ||||||| | Sbjct 16623674 TCATGAAGAGAGCTGCAATCCAAAGAGC---AAAAAGATCTCTGGCACGCTGTTCTTCCT 16623618 Query 48271 TGCCACTATTCCTTTTAAGTTCAAGAAAGTCCATTATATCAGCATGCCATGGTTCTAAAT 48330 | | ||||| | || | |||| || || | || || |||||| || || | | Sbjct 16623617 TTTCTATATTCTTCTTTAAATCAAAGAATTCAAAGATGTCTAAATGCCAAGGCTCCAGGT 16623558 Query 48331 ATATTGCCATTACACCTGGTCGTTTATTACCTCCTTGATCTATATATCTGGCAGTATTGT 48390 | || || | | | || || | || || | ||| |||| | ||||| || || |||| Sbjct 16623557 AAATAGCAAATGCTCCAGGACACTTGTTCCTACCTCGATCCAGATATCAAGCTGTGTTGT 16623498 Query 48391 TATAAACTCTTAACATTGGGACAATACCATTTGATATACCATTGGTTCCCGAAATATAAC 48450 |||| ||||| | ||| | |||| ||||| || | ||||| || | | ||| || | Sbjct 16623497 TATATACTCTCAGCATCAGTACAAGGCCATTGGAATTGCCATTCGTCTCAGCAATGTAGC 16623438 Query 48451 TTCCACTAGCTCTTATATTACTAATTGAAATACCTATACCACCTGCCATTTTAGATATTA 48510 | ||| |||| | ||| ||| | | || ||| || || || | |||||| || | Sbjct 16623437 TGCCAGTAGCCCAAATACAACTCACAGCAACACCAATTCCTCCACCAGATTTAGAAATCA 16623378 Query 48511 GAGCACACCGTTTAAGGGTATCATAAATTCCTTCTATACTATCATCTATCATATTTAATA 48570 ||| | | || || || |||||||| ||||| || || |||| | ||||| | | | Sbjct 16623377 ATGCATATTGCTTTAGAGTGTCATAAATGCCTTCAATGCTGTCATATTTCATACTCAGAA 16623318 Query 48571 GAAAACAACTAGACATTTGCGGATGACAAGTTCCTGAATTAAATAATGTTGGAGATGCAT 48630 ||||||| ||||| | ||| || || || | | || | ||||| || |||| Sbjct 16623317 GAAAACAGCTAGAAAGTTGTGGGCAGTTGGTACCAACACTGAAGAGAGTTGGTGAAGCAT 16623258 Query 48631 GAATAAACCATTTCTCTG--ATAACAATTTATA-TGTTTCAATAACAGAATCTATATCCC 48687 || ||||| | |||| | | || | | | | ||||||||| | ||| || || Sbjct 16623257 GAGTAAACTACCTCTCAGGAAGAAGATTGTCTGCTGTTTCAATTGCTACATCAATGTCTT 16623198 Query 48688 ATTGATGTATACCTATAGATACACGCATTAACATATATTGAGGTCTTTCAACAATTTTGT 48747 || || || || | |||| | | ||| ||||||| | ||| ||||| | | ||| Sbjct 16623197 CTTTGTGGATTCCAACAGATGCTCTCATCAACATATGCCGTGGTATTTCAGCCACTTTTC 16623138 Query 48748 TATTTATTTTCAAAAGATATGATTTTTCCAATGTTTTAAAACCAAAATAGTTGTATGAAA 48807 ||| |||||||| | ||| || || | ||||||||||| || ||||| || | Sbjct 16623137 CATTGATTTTCAACAAATAAGACCACTCTAGCAACTTAAAACCAAAGTAATTGTAAGAGA 16623078 Query 48808 AGTC 48811 | || Sbjct 16623077 AATC 16623074 >seq2 Length=18007423 Score = 129 bits (142), Expect = 7e-25 Identities = 103/124 (83%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 18983 CCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAACCAGGCATCAGTCCTCtttttt 19042 |||| ||||| || || | ||||||||||||||| | |||||||||||||||| ||| | Sbjct 1941489 CCTCATCTCTGCTAATAAGTTCATTAGAAAATGTGAGGCCAGGCATCAGTCCTCGTTTCT 1941430 Query 19043 ttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAATATACCTTCTACTGCTGCAAAAG 19102 | | ||||||||| || ||||| || ||||||||||| || ||||||||||| ||||| | Sbjct 1941429 TGAGCCAGAATATGGATGCAAAAGAACCAGAAAAGAAGATGCCTTCTACTGCAGCAAAGG 1941370 Query 19103 CAAC 19106 | || Sbjct 1941369 CTAC 1941366 Score = 109 bits (120), Expect = 6e-19 Identities = 113/146 (77%), Gaps = 4/146 (3%) Strand=Plus/Minus Query 18612 TTAAAAATCAACATCCAAAGAAAAAGAATTCTCTTCATTAGAATT--CATTACTCCCATT 18669 ||| || ||| ||||||| | ||||||||||||| || || || ||| |||||||| Sbjct 1943293 TTAGAAGTCAGCATCCAAGGTAAAAGAATTCTCTG--TTGGACTTGACATCACTCCCATC 1943236 Query 18670 TTTTGATATTCGGCAACTCTTTTTTCAAAGAAATTAGTTTTTCCCTCTAATGATATACAT 18729 | ||||| ||| | ||||| || |||||||| ||||| ||||| || | ||| ||| Sbjct 1943235 CTCTGATACTCGCCTACTCTCTTCTCAAAGAAGTTAGTCTTTCCTTCCAGTGAAATATTC 1943176 Query 18730 TCCATAAAATCAAATGGATTTTTTAC 18755 |||||||| ||||||||||| | ||| Sbjct 1943175 TCCATAAAGTCAAATGGATTCTCTAC 1943150 >seq57 Length=8566406 Score = 102 bits (112), Expect = 9e-17 Identities = 103/134 (77%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 18985 TCGTCTCTACTTATCAATTCATTAGAAAATGTTAAACCAGGCATCAGTCCTCtttttttt 19044 || ||||| || || | |||||| ||||| || | || ||||| || ||||| || ||| Sbjct 1418657 TCATCTCTGCTGATGAGTTCATTGGAAAACGTGAGTCCTGGCATAAGACCTCTCTTCTTT 1418716 Query 19045 AACCAGAATATAGAAGCAAATGATCCAGAAAAGAATATACCTTCTACTGCTGCAAAAGCA 19104 | ||||||||||| |||||| ||||| || ||||| | |||||||| || || || || Sbjct 1418717 AGCCAGAATATAGCAGCAAAAGATCCTGAGAAGAAAACTCCTTCTACAGCAGCGAAGGCC 1418776 Query 19105 ACTAGTCTTTCTCC 19118 || | |||||| || Sbjct 1418777 ACCACTCTTTCCCC 1418790 >seq80 Length=8459403 Score = 98.7 bits (108), Expect = 1e-15 Identities = 102/134 (76%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 47328 TGAAATTCTCCAGATAGTACTCTACGGCTATATATATTACTTGTATATGGTTCTATAGAT 47387 ||||||||||| || | ||||| || |||| || || || || || ||||| ||||| Sbjct 1278104 TGAAATTCTCCTGACAAGACTCTGCGAGTATAGATGTTGCTGGTGTAAGGTTCAATAGAC 1278163 Query 47388 TCATTATTTCCAAAAATTTGAGCAGTTGATGCTGTAGGCATGGATGCAACTAATAAGCTA 47447 |||||||| || | || |||||||| || ||||||||||| | |||| | ||| || Sbjct 1278164 TCATTATTCCCCAGGATCTGAGCAGTGGAAGCTGTAGGCATCGGGGCAATAAGTAAACTG 1278223 Query 47448 TTTCTTACTCCATA 47461 ||||||| ||||| Sbjct 1278224 TTTCTTATACCATA 1278237 Score = 93.3 bits (102), Expect = 5e-14 Identities = 122/169 (72%), Gaps = 0/169 (0%) Strand=Plus/Plus Query 47050 TCCATCCATAGAAATGCATACTAGTTAATTTAGAATAACTAGGTTCTGAAATATGAATAT 47109 |||| || ||||| ||||||||||| | ||| ||| |||| || | ||| || || | Sbjct 1275313 TCCAGCCGTAGAAGTGCATACTAGTGAGTTTGCCATAGTTAGGCTCAGCAATGTGGATGT 1275372 Query 47110 TAAGAGATTGACTCTGATCAATAAATGCACCTCTATCAGCTGCCATATCTAAAATAACCC 47169 | | ||| || || |||||||| || |||||||| ||||| ||||| | | || | Sbjct 1275373 TCAAAGACTGGCTTTGATCAATGAAAGCACCTCTCTCAGCAGCCATCTTGAGAACAGTTT 1275432 Query 47170 TTTGTGGTATCTCCCATACTGTTTTATAAATTTGTTTAATGTCTTCTGG 47218 | || | || ||||| || |||||||||| ||| || | ||| || || Sbjct 1275433 TCTGAGAGATTTCCCACACAGTTTTATAAAGTTGCTTCAGGTCATCAGG 1275481 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562058519367840