Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cebus_20capucinus_20imitator_20[refseq_20GCF_5F001604975.1_202016-
04-04] 7,156 sequences; 2,717,703,182 total letters
Query= NC_016447.1
Length=219474
Score E
Sequences producing significant alignments: (Bits) Value
seq542 156 6e-33
seq314 132 7e-26
>seq542
Length=1979518
Score = 156 bits (172), Expect = 6e-33
Identities = 182/246 (74%), Gaps = 0/246 (0%)
Strand=Plus/Plus
Query 197398 CCGCTAAATATCTCAAACGCGACAGATATTGAGAACGTGGCTTGGAACGGCCCTAAAATC 197457
|| |||||||||||| || ||||| |||||| |||| | ||||| || || ||||
Sbjct 15248 CCCCTAAATATCTCAGTAGCCACAGACATTGAGCACGTCACCTGGAATGGTCCCAAAAAT 15307
Query 197458 GCTTTAGCATTTGCCAATCCTAAAGACGTTACCATAATGGATAAAAGCTACCAGGGTCGT 197517
||| | || || || ||||| |||| || | | | ||||| |||||||||||||| ||
Sbjct 15308 GCTCTTGCTTTAGCAAATCCCAAAGGTGTAATCCTTATGGACAAAAGCTACCAGGGCCGA 15367
Query 197518 GTCAACATTAGCCAAACCAACTACTCTTTGTGCATTAGGAACCTGACCGTGAATGATGCT 197577
| ||||| | | || || ||||| || ||| || || ||||| |||| || ||
Sbjct 15368 CTAAACATCACCAAATGGAATTACTCCCTGCACATCAGCAATCTGACTCTGAACGACGCA 15427
Query 197578 GGTTCGTATAAGGCCCAAATTAACAAAAATAATTCCCAAGTCACCACCAAGGAGGAATTT 197637
|| | || || ||||| || |||||||| ||||| |||||||||| ||||| ||||||
Sbjct 15428 GGCTTCTACAAAGCCCAGATAAACAAAAAGAATTCTGAAGTCACCACTAAGGAAGAATTT 15487
Query 197638 ACTCTG 197643
|| |||
Sbjct 15488 ACCCTG 15493
>seq314
Length=2703318
Score = 132 bits (146), Expect = 7e-26
Identities = 189/264 (72%), Gaps = 4/264 (2%)
Strand=Plus/Minus
Query 209129 TCATCAAACACCTGTAGTCTGATTTTCCAGTCCTGCTCAAACATGGTATCTTTTAAAACC 209188
||| |||||||||| || ||||| ||||| || |||||| ||||||| | || || |||
Sbjct 74905 TCACCAAACACCTGCAGCCTGATCTTCCATTCTTGCTCAGACATGGTCTTCTTCAACACC 74846
Query 209189 CTCATAATATATATGTTAGCATCCTCTTTTTGAACGCGAGACAAATATAACGCACCGGAC 209248
||||| || || ||||| ||||||||||| || || ||||| || | || || ||
Sbjct 74845 CTCATGATGTAGATGTTGGCATCCTCTTTCTGGACCTTAGACATGTACAGTGCGCC--AC 74788
Query 209249 T--GGGAATCCAATCGAACTCGCCCTTTGAATTTATTGTCAAAATATTTTAAGCGTTTTA 209306
| | ||||| | || || | ||||| ||| |||| ||||| || || | | | | |
Sbjct 74787 TTCGAGAATCGAGTCTGACCCTGCCTTTAAATCTATTTTCAAAGTACTTAAGTCTTCTGA 74728
Query 209307 CATCCCAATCCGCTATCTTTTGATCATAGGTACAAAACCATGTAATCTCTCTAACATTTT 209366
||||||| || || ||||| | | ||| ||| ||||||| || || || || || |
Sbjct 74727 CATCCCAGTCTGCGATCTTCAGGTTATAAGTATAAAACCAAGTTATTCCTTGGACGTTCT 74668
Query 209367 CAGGAAGAGATTCTGAAATGTTCA 209390
|||| || || || |||||||
Sbjct 74667 CAGGTAGGCTCTCGGAGATGTTCA 74644
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 702125989211840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |