Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cebus_20capucinus_20imitator_20[refseq_20GCF_5F001604975.1_202016-
04-04] 7,156 sequences; 2,717,703,182 total letters
Query= NC_018504.1
Length=123876
Score E
Sequences producing significant alignments: (Bits) Value
seq683 109 4e-19
seq69 107 2e-18
seq407 105 5e-18
seq290 98.7 8e-16
seq38 96.9 3e-15
seq19 95.1 1e-14
seq6 93.3 3e-14
seq487 87.8 1e-12
seq136 86.0 5e-12
seq1 82.4 6e-11
>seq683
Length=714717
Score = 109 bits (120), Expect = 4e-19
Identities = 146/203 (72%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326
|| ||||| || ||||| || || ||||| || | || || | | |||| |||| |
Sbjct 111400 TGCAGGGTGGACTCTTTCTGGATGTTGTAGTCTGAGAGCGTGCGGCCATCCTCCAGCTAT 111459
Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386
||||| |||||||||| |||||| ||||| || || || || || || |||||||||||
Sbjct 111460 TTACCGGCAAATATCAGACGCTGCTGATCAGGTGGGATACCCTCCTTGTCTTGAATTTTG 111519
Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446
||| ||| | || | |||||| | || || ||||| |||| || ||||| |
Sbjct 111520 GCTTTAACATTCTCAATGGTGTCACTGGGCTCGACCTCAAGGGTGATGGTCTTGCCCATG 111579
Query 101447 AAAGTTTTTACAAATATCTGCAT 101469
| || || ||||| ||||||||
Sbjct 111580 AGGGTCTTCACAAAGATCTGCAT 111602
>seq69
Length=11786368
Score = 107 bits (118), Expect = 2e-18
Identities = 151/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 101258 AAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCG 101317
|| || | |||||| ||||| || || || || ||||| || | | ||| | ||||
Sbjct 9297222 AACACAAGATGAAGAGTAGACTCCTTCTGAATGTTGTAGTCAGACAAAGTACCTCCATCT 9297163
Query 101318 TCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCT 101377
|||| |||||| || ||||| |||| | || ||||| || ||||||||||| ||||||
Sbjct 9297162 TCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATGCCTTCCTTATCT 9297103
Query 101378 TGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTT 101437
|| || || |||||| ||||| ||| || | | ||| || || || ||| ||
Sbjct 9297102 TGGATCTTGGCCTTTACATTTTCTGTAGTATCCAAGGGTTCAACCTCGAGGTTGATGGTC 9297043
Query 101438 TTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469
|| || || | ||||| || || ||||||||
Sbjct 9297042 TTCCCTGTAAGGGTTTTCACGAAAATCTGCAT 9297011
>seq407
Length=3256691
Score = 105 bits (116), Expect = 5e-18
Identities = 145/203 (71%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326
|| ||||| || ||||| || || ||||| || | || || | | |||| |||| |||
Sbjct 904243 TGCAGGGTGGACTCTTTCTGGATGTTGTAGTCTGAGAGCGTGCGGCCATCCTCCAGCTGC 904302
Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386
| | |||||||||| |||||| || || || || || || || || |||||||||||
Sbjct 904303 TGGCTGGCAAATATCAGACGCTGCTGGTCAGGTGGGATACCCTCCTTGTCTTGAATTTTG 904362
Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446
||| ||| | || | |||||| | || || ||||| |||| || ||||| ||
Sbjct 904363 GCTTTGACATTCTCAATGGTGTCATTGGGCTCGACCTCAAGGGTGATGGTCTTGCCCGTG 904422
Query 101447 AAAGTTTTTACAAATATCTGCAT 101469
| || || ||||| ||||||||
Sbjct 904423 AGGGTCTTCACAAAGATCTGCAT 904445
>seq290
Length=2922102
Score = 98.7 bits (108), Expect = 8e-16
Identities = 149/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 101258 AAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCG 101317
|| || | |||||| |||| || ||||| || ||||| || | | ||| | ||||
Sbjct 1757556 AACACAAGATGAAGAATAGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACATCCATCT 1757615
Query 101318 TCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCT 101377
|||| |||||| || ||||| |||| | || ||||| ||||| |||||||||||
Sbjct 1757616 TCCAGTTGCTTGCCAGCAAAGATCAGCCTTTGCTGATCACAAGGAATTCCTTCTTTATCC 1757675
Query 101378 TGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTT 101437
|| || || |||||| |||||| || || || | ||| | || || |||| ||
Sbjct 1757676 TGGATCTTGGACTTTACATTTTCTATCGTATCCGAAGGTTCAGCCTCGAGGGTGATGGTC 1757735
Query 101438 TTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469
|| || | | ||||| ||||| ||||||||
Sbjct 1757736 TTCCCCATAAGGGTTTTCACAAAAATCTGCAT 1757767
>seq38
Length=10264441
Score = 96.9 bits (106), Expect = 3e-15
Identities = 144/203 (71%), Gaps = 1/203 (0%)
Strand=Plus/Minus
Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326
|| ||||| || ||||| || || ||||| || | || || | |||| |||| ||
Sbjct 9540848 TGCAGGGTGGACTCTTTCTGGATGTTGTAGTCTGAGAGTGTGTGGCCATCCTCCAGCTGT 9540789
Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386
|| || |||||||||| |||||| || || || || || || || || |||||||||||
Sbjct 9540788 TTGCCGGCAAATATCAGACGCTGCTGGTCAGGTGGGATACCCTCCTTGTCTTGAATTTTG 9540729
Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446
||| ||| | || | |||||| | || || ||||| |||| || ||||| |
Sbjct 9540728 GCTTTGACATTCTCAATGGTGTCA-CGGGCTCGACCTCAAGGGTGATGGTCTTGCCCATG 9540670
Query 101447 AAAGTTTTTACAAATATCTGCAT 101469
| || || ||||| ||||||||
Sbjct 9540669 AGGGTCTTCACAAAGATCTGCAT 9540647
>seq19
Length=20362211
Score = 95.1 bits (104), Expect = 1e-14
Identities = 148/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 101258 AAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCG 101317
|| || | |||||| ||| | || ||||| || ||||| || | | ||| | | ||
Sbjct 6160556 AACACAAGATGAAGAGTAAACTCCTTTTGAATGTTGTAGTCAGACAAAGTACGTCCGTCT 6160497
Query 101318 TCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCT 101377
|||| |||||| || ||||| |||| | || ||||| || ||||| |||||||||||
Sbjct 6160496 TCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCC 6160437
Query 101378 TGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTT 101437
|| || || |||||| |||||| | || || ||||| | ||||| |||| ||
Sbjct 6160436 TGGATCTTGGCCTTTACATTTTCTATTATATCCGAGGTTTCAAACTCAAGGGTGATGGTC 6160377
Query 101438 TTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469
| | | | ||||| | ||| ||||||||
Sbjct 6160376 TCCCTCATAAGGGTTTTCAGAAAAATCTGCAT 6160345
>seq6
Length=15684572
Score = 93.3 bits (102), Expect = 3e-14
Identities = 143/204 (70%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 101266 ATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTG 101325
||| ||||| || ||||| | || ||||| || | || | | | | |||| |||| ||
Sbjct 13057142 ATGCAGGGTGGACTCTTTCTAGATGTTGTAGTCTGAGAGACTGCAGCCATCCTCCAGCTG 13057083
Query 101326 CTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTT 101385
|| || ||||| |||| || ||| || || || | || || || || |||||||||||
Sbjct 13057082 TTTGCCGGCAAACATCAGACACTGCTGGTCAGGTGTGATACCCTCCTTGTCTTGAATTTT 13057023
Query 101386 TTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGT 101445
||| ||| | || | ||||| || || || ||||| |||| || ||||| ||
Sbjct 13057022 GGCTTTGACATTCTCAATGGTGTCCCCAGTCTCGACCTCAAGGGTGATGGTCTTGCCCGT 13056963
Query 101446 TAAAGTTTTTACAAATATCTGCAT 101469
| ||| || ||||| |||| |||
Sbjct 13056962 GAGAGTCTTCACAAAGATCTACAT 13056939
>seq487
Length=2137387
Score = 87.8 bits (96), Expect = 1e-12
Identities = 141/203 (69%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326
|| ||||| || ||||| || || ||||| || | || || | | |||| |||| ||
Sbjct 1405245 TGCAGGGTGGACTCTTTCTGGATGTTGTAGTCTGAGAGCGTGCGGCCATCCTCCAGCTGT 1405304
Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386
| || |||||||||| || ||| || || || || || || | || |||||||||||
Sbjct 1405305 TGGCCGGCAAATATCAGACACTGCTGGTCAGGTGGGATACCCACCTTGTCTTGAATTTTG 1405364
Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446
||| ||| | || | |||||| | || || ||||| |||| || || || ||
Sbjct 1405365 GATTTAACATTCTCAATGGTGTCACTGGGCTCGACCTCAAGGGTGATGGTCTTACCCGTG 1405424
Query 101447 AAAGTTTTTACAAATATCTGCAT 101469
| || || ||| | ||||||||
Sbjct 1405425 AGGGTCTTCACAGAGATCTGCAT 1405447
>seq136
Length=5279821
Score = 86.0 bits (94), Expect = 5e-12
Identities = 143/204 (70%), Gaps = 2/204 (1%)
Strand=Plus/Minus
Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCG-TCCAATTG 101325
|| ||||| || ||||| || || | ||| || | || ||| |||| | |||| ||
Sbjct 2782408 TGCAGGGTGGACTCTTTCTGGATGTCGTAGTCAGAGAGAGTG-TGGCTAGGCTCCAGCTG 2782350
Query 101326 CTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTT 101385
|| || |||||||||| |||||| || || || | || || || || |||||||||||
Sbjct 2782349 TTTGCCAGCAAATATCAGACGCTGCTGGTCAGGTTGGATACCCTCCTTCTCTTGAATTTT 2782290
Query 101386 TTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGT 101445
||| ||| | || |||||| | || || | |||||||| || ||||| |
Sbjct 2782289 GGCTTTGACATTCTCAGTGGTGTCATTGGACTCGACCTAAAGAGTGATGGTCTTGCCCAT 2782230
Query 101446 TAAAGTTTTTACAAATATCTGCAT 101469
| ||||| ||||| ||||||||
Sbjct 2782229 GAGGGTTTTCACAAAGATCTGCAT 2782206
>seq1
Length=21314971
Score = 82.4 bits (90), Expect = 6e-11
Identities = 140/203 (69%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326
|| ||| | || ||||| || || ||||| || | || || | | |||| |||| ||
Sbjct 4712567 TGCAGGTTGGACTCTTTCTGGATGTTGTAGTCTGAGAGCGTGCAGCCATCCTCCAGCTGT 4712508
Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386
|| || ||||| |||| |||||| || || || || || | || || |||||||||||
Sbjct 4712507 TTGCCGGCAAACATCAGACGCTGCTGGTCAGGTGGGATAGCCTCCTTGTCTTGAATTTTG 4712448
Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446
||| ||| | || |||||| | || || ||||| |||| || ||||| |
Sbjct 4712447 GCTTTGACATTCTCAGTGGTGTCACTGGGCTCGACCTCAAGGGTGATGGTCTTGCCCATG 4712388
Query 101447 AAAGTTTTTACAAATATCTGCAT 101469
| || || ||||| ||||| ||
Sbjct 4712387 AGGGTCTTCACAAAGATCTGTAT 4712365
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 396243839074692
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