Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cebus_20capucinus_20imitator_20[refseq_20GCF_5F001604975.1_202016- 04-04] 7,156 sequences; 2,717,703,182 total letters Query= NC_019559.1 Length=202946 Score E Sequences producing significant alignments: (Bits) Value seq202 132 6e-26 >seq202 Length=3867970 Score = 132 bits (146), Expect = 6e-26 Identities = 214/305 (70%), Gaps = 2/305 (1%) Strand=Plus/Minus Query 153707 AAGTGGTAACACAGGATGTAAATTCATCACTTCGAT-CGCCCGCGTCCCTCAGATGCTCG 153765 ||||||| || ||||||| ||| | || | || |||| || ||| | |||||||| Sbjct 1653015 AAGTGGTGACCCAGGATG-AAAGAGAGCAGCTGAATACGCCTGCTTCCTTAAGATGCTCT 1652957 Query 153766 TTGAAAACTACACAAGAACCTTTAATTGTAACGTGGCAAAAGAAGAAAGCTGTAGGTCCA 153825 || ||||||| | ||| | ||||| || ||||| || |||||||||||| | ||| Sbjct 1652956 CTGCAAACTACCTACGAAGTCCTGATTGTGACATGGCAGAAAAAGAAAGCTGTAAGCCCA 1652897 Query 153826 GAAAATATGGCCACGTATAGCAAAGCCCACGGTGTAGTGCTTCAGCCCACATATAAAGAT 153885 ||||| | ||||| | ||||| | | || || ||| | ||||| | || || || Sbjct 1652896 GAAAACGTAGCCACCTTCAGCAACAGCTATGGGGTGGTGGTCCAGCCTGCCTACAAGGAC 1652837 Query 153886 AGAATTAATATAACCGAATTAGGTCTTTTAAACAGTAGTATAACGTTTTGGAATGCAACA 153945 | | || || ||||| | || || |||| | || || || |||||| | || Sbjct 1652836 AAGTTGAACATTACCGAGCTGGGACTCCAAAACTCAACCATCACCTTCTGGAATACCACC 1652777 Query 153946 CTGGATGATGAAGGCTGTTATATGTGTCTGTTTAATATGTTCGGTTCTGGTAAGGTATCG 154005 ||||| |||||||| ||||| |||||||| || |||| || |||| ||| ||| | || Sbjct 1652776 CTGGAGGATGAAGGGTGTTACATGTGTCTCTTCAATACCTTTGGTTATGGGAAGATCTCA 1652717 Query 154006 GGAAC 154010 ||||| Sbjct 1652716 GGAAC 1652712 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 649241120186560