Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cebus_20capucinus_20imitator_20[refseq_20GCF_5F001604975.1_202016-
04-04] 7,156 sequences; 2,717,703,182 total letters
Query= NC_019559.1
Length=202946
Score E
Sequences producing significant alignments: (Bits) Value
seq202 132 6e-26
>seq202
Length=3867970
Score = 132 bits (146), Expect = 6e-26
Identities = 214/305 (70%), Gaps = 2/305 (1%)
Strand=Plus/Minus
Query 153707 AAGTGGTAACACAGGATGTAAATTCATCACTTCGAT-CGCCCGCGTCCCTCAGATGCTCG 153765
||||||| || ||||||| ||| | || | || |||| || ||| | ||||||||
Sbjct 1653015 AAGTGGTGACCCAGGATG-AAAGAGAGCAGCTGAATACGCCTGCTTCCTTAAGATGCTCT 1652957
Query 153766 TTGAAAACTACACAAGAACCTTTAATTGTAACGTGGCAAAAGAAGAAAGCTGTAGGTCCA 153825
|| ||||||| | ||| | ||||| || ||||| || |||||||||||| | |||
Sbjct 1652956 CTGCAAACTACCTACGAAGTCCTGATTGTGACATGGCAGAAAAAGAAAGCTGTAAGCCCA 1652897
Query 153826 GAAAATATGGCCACGTATAGCAAAGCCCACGGTGTAGTGCTTCAGCCCACATATAAAGAT 153885
||||| | ||||| | ||||| | | || || ||| | ||||| | || || ||
Sbjct 1652896 GAAAACGTAGCCACCTTCAGCAACAGCTATGGGGTGGTGGTCCAGCCTGCCTACAAGGAC 1652837
Query 153886 AGAATTAATATAACCGAATTAGGTCTTTTAAACAGTAGTATAACGTTTTGGAATGCAACA 153945
| | || || ||||| | || || |||| | || || || |||||| | ||
Sbjct 1652836 AAGTTGAACATTACCGAGCTGGGACTCCAAAACTCAACCATCACCTTCTGGAATACCACC 1652777
Query 153946 CTGGATGATGAAGGCTGTTATATGTGTCTGTTTAATATGTTCGGTTCTGGTAAGGTATCG 154005
||||| |||||||| ||||| |||||||| || |||| || |||| ||| ||| | ||
Sbjct 1652776 CTGGAGGATGAAGGGTGTTACATGTGTCTCTTCAATACCTTTGGTTATGGGAAGATCTCA 1652717
Query 154006 GGAAC 154010
|||||
Sbjct 1652716 GGAAC 1652712
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 649241120186560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |