Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cebus_20capucinus_20imitator_20[refseq_20GCF_5F001604975.1_202016-
04-04] 7,156 sequences; 2,717,703,182 total letters
Query= NC_019945.1
Length=132978
Score E
Sequences producing significant alignments: (Bits) Value
seq290 98.7 8e-16
seq434 91.5 1e-13
>seq290
Length=2922102
Score = 98.7 bits (108), Expect = 8e-16
Identities = 159/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 28552 AAATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTT 28611
||||||| || ||||| ||||| | | ||| || ||||| ||| ||| | |||||||
Sbjct 1757769 AAATGCAGATTTTTGTGAAAACCCTTATGGGGAAGACCATCACCCTCGAGGCTGAACCTT 1757710
Query 28612 CAGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATC 28671
| || ||| | | || | ||| || ||| || ||||| ||| | || ||||
Sbjct 1757709 CGGATACGATAGAAAATGTAAAGTCCAAGATCCAGGATAAAGAAGGAATTCCTTGTGATC 1757650
Query 28672 AACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATA 28731
| || || || |||||||| ||||| ||| |||||||| ||| || | || || |
Sbjct 1757649 AGCAAAGGCTGATCTTTGCTGGCAAGCAACTGGAAGATGGATGTACTTTGTCTGACTACA 1757590
Query 28732 ACATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGG 28780
|||||||||| || |||| ||| || | || || ||| | || || ||
Sbjct 1757589 ACATTCAAAAGGAGTCTATTCTTCATCTTGTGTTGAGACTTCGTGGTGG 1757541
>seq434
Length=1819716
Score = 91.5 bits (100), Expect = 1e-13
Identities = 158/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 28551 AAAATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCT 28610
|||||||| || || || ||||| | || || || ||||| ||| ||| |||||
Sbjct 1331511 AAAATGCAGATTTTCGTGAAAACCCTTACAGGGAAGACCATCACCCTCGAGGTTGAACCC 1331452
Query 28611 TCAGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGAT 28670
|| || ||| | | || | ||| || ||| || || || ||| | || |||
Sbjct 1331451 TCGGATACGATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGAT 1331392
Query 28671 CAACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTAT 28730
|| || ||||| |||||||| ||||| ||| |||||||| ||| || | || |||
Sbjct 1331391 CAGCAAAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTAT 1331332
Query 28731 AACATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGG 28780
|||||||| || || |||||||| || | || || ||| | || || ||
Sbjct 1331331 AACATTCAGAAGGAGTCTACTCTTCATCTTGTGTTGAGACTTCGTGGTGG 1331282
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 425367698852124
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |