Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cebus_20capucinus_20imitator_20[refseq_20GCF_5F001604975.1_202016- 04-04] 7,156 sequences; 2,717,703,182 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq73 100 8e-16 >seq73 Length=7711548 Score = 100 bits (110), Expect = 8e-16 Identities = 162/233 (70%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 302607 ACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATG 302666 |||||| || || || |||||||| || || || || ||||||| ||||| ||||| Sbjct 6753751 ACCAGTCTCAGCAGTCTTCACAGCTGTGTCGATGAGCCCCTCACGACCCCCCATGGCATG 6753810 Query 302667 GAAGAATAGCTCTTCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGC 302726 |||||| | ||| ||| || || | | ||||| |||| || || ||||| Sbjct 6753811 GAAGAAGAACTCGGTGGGTGTGAGGCCGGCCAGGTAGGAGTTCTCCACAAAGCCACGGCT 6753870 Query 302727 CTCGGGCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGG 302786 ||| ||| || ||| |||| | ||||| ||||| |||| || || |||| |||| Sbjct 6753871 CTCAGGCCCATAGTCATCCTTGATGAAGTGAGGCAGAGTCCGGTGCTTGAAGCCAAATGG 6753930 Query 302787 GATACGCTTTCCATCAACGTTCTGCTGTCCCAGGCACGAAATCATCTGCGAAA 302839 || ||||| || || ||||||||||| || | | | ||| | ||| |||| Sbjct 6753931 AATCCGCTTGCCCTCCACGTTCTGCTGGCCGACGACAGCAATGACCTGGGAAA 6753983 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471682654563572