Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cebus_20capucinus_20imitator_20[refseq_20GCF_5F001604975.1_202016-
04-04] 7,156 sequences; 2,717,703,182 total letters
Query= NC_021858.1
Length=1908524
Score E
Sequences producing significant alignments: (Bits) Value
seq76 161 1e-33
seq682 158 1e-32
seq336 158 1e-32
seq826 156 5e-32
seq1086 152 6e-31
seq787 152 6e-31
seq189 152 6e-31
seq257 145 9e-29
seq127 131 2e-24
seq599 113 6e-19
seq140 96.9 4e-14
seq29 93.3 5e-13
seq2 93.3 5e-13
seq77 91.5 2e-12
seq4 86.0 8e-11
>seq76
Length=7665841
Score = 161 bits (178), Expect = 1e-33
Identities = 155/199 (78%), Gaps = 0/199 (0%)
Strand=Plus/Minus
Query 1254348 GCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCGTG 1254407
||||| || ||| ||| | |||||||||||| ||||| | |||||| | ||| |||
Sbjct 852287 GCCAGCTCACCGGGCAGCAGCAGGCGCACGGCCGTCTGCACCTCGCGAGACGTGATGGTG 852228
Query 1254408 TTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCG 1254467
||||||||| |||||||||| ||| ||||||| || ||||||| |||| |||||
Sbjct 852227 GAGCGCTTGTTGTAGTGCGCCAGGCGGGAGGCCTCGCTGGCGATGCGCTCGAAGATGTCA 852168
Query 1254468 TTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCACC 1254527
||||| || |||||||||| ||| | |||| |||||||| |||||| ||||||
Sbjct 852167 TTGACGAAGGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCGGTGTCGGGATGCACC 852108
Query 1254528 TGCTTGAGCACCTTGTAGA 1254546
||||| |||||||||||||
Sbjct 852107 TGCTTCAGCACCTTGTAGA 852089
Score = 156 bits (172), Expect = 5e-32
Identities = 154/199 (77%), Gaps = 0/199 (0%)
Strand=Plus/Plus
Query 1254348 GCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCGTG 1254407
||||| || ||| ||| | |||||||||||| ||||| | |||||| | ||| |||
Sbjct 858029 GCCAGCTCACCGGGCAGCAGCAGGCGCACGGCCGTCTGCACCTCGCGAGACGTGATGGTG 858088
Query 1254408 TTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCG 1254467
||||||||| |||||||||| ||| ||||||| || |||| || |||| |||||
Sbjct 858089 GAGCGCTTGTTGTAGTGCGCCAGGCGGGAGGCCTCGCTGGCGATCCGCTCGAAGATGTCA 858148
Query 1254468 TTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCACC 1254527
||||| || |||||||||| ||| | |||| |||||||| |||||| ||||||
Sbjct 858149 TTGACGAAGGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCGGTGTCGGGATGCACC 858208
Query 1254528 TGCTTGAGCACCTTGTAGA 1254546
||||| |||||||||||||
Sbjct 858209 TGCTTCAGCACCTTGTAGA 858227
>seq682
Length=724433
Score = 158 bits (174), Expect = 1e-32
Identities = 156/202 (77%), Gaps = 0/202 (0%)
Strand=Plus/Minus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| ||||||| || ||| ||| | |||||||||||| ||||||||||| | | | ||
Sbjct 14641 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCTGGAGGTGA 14582
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| || ||||||||| | |||||||| ||| |||||| ||||||| |||| |
Sbjct 14581 TGGTCGAGCGCTTGTTGTAATGCGCCAGGCGGGAAGCCTCGCCCGCGATGCGCTCGAAGA 14522
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
|||||||||| || |||||||||| ||| | |||| ||||||||| ||||||||
Sbjct 14521 TGTCGTTGACGAAGGAGTTCATGATGCCCATGGCCTTGGAGGAGATGCCGGTGTCGGGGT 14462
Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544
|||||||||| |||||||||||
Sbjct 14461 GCACCTGCTTCAGCACCTTGTA 14440
>seq336
Length=2558000
Score = 158 bits (174), Expect = 1e-32
Identities = 156/202 (77%), Gaps = 0/202 (0%)
Strand=Plus/Minus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| |||||||||| ||| ||| | |||||||||||| ||||||||||| | | | ||
Sbjct 171187 GCTTGGCCAGTTCCCCGGGCAGCAGCAGGCGCACGGCTGTCTGGATCTCCCTGGAGGTGA 171128
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| || ||||||||| | |||||||| ||| |||||| ||||||| |||| |
Sbjct 171127 TGGTCGAGCGCTTGTTGTAATGCGCCAGGCGGGAAGCCTCGCCCGCGATGCGCTCGAAGA 171068
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
|||||||||| || |||||||||| ||| | |||| ||||||||| ||||||||
Sbjct 171067 TGTCGTTGACGAAGGAGTTCATGATGCCCATGGCCTTGGAGGAGATGCCGGTGTCGGGGT 171008
Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544
| |||||||| |||||||||||
Sbjct 171007 GGACCTGCTTCAGCACCTTGTA 170986
Score = 152 bits (168), Expect = 6e-31
Identities = 155/202 (77%), Gaps = 0/202 (0%)
Strand=Plus/Minus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| ||||||| || ||| ||| | |||||||||||| ||||||||||| | | | ||
Sbjct 87472 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCTGGAGGTGA 87413
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| || ||||||||| | |||||||| ||| |||||| ||||||| |||| |
Sbjct 87412 TGGTCGAGCGCTTGTTGTAATGCGCCAGGCGGGAAGCCTCGCCCGCGATGCGCTCGAAGA 87353
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
|||||||||| || |||||||||| ||| | |||| ||||||||| ||||||||
Sbjct 87352 TGTCGTTGACGAAGGAGTTCATGATGCCCATGGCCTTGGAGGAGATGCCGGTGTCGGGGT 87293
Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544
| |||||||| |||||||||||
Sbjct 87292 GGACCTGCTTCAGCACCTTGTA 87271
Score = 152 bits (168), Expect = 6e-31
Identities = 155/202 (77%), Gaps = 0/202 (0%)
Strand=Plus/Plus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| ||||||| || ||| ||| | |||||||||||| ||||||||||| | | | ||
Sbjct 105115 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCTGGAGGTGA 105174
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| || ||||||||| | |||||||| ||| |||||| ||||||| |||| |
Sbjct 105175 TGGTCGAGCGCTTGTTGTAATGCGCCAGGCGGGAAGCCTCGCCCGCGATGCGCTCGAAGA 105234
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
|||||||||| || |||||||||| ||| | |||| ||||||||| ||||||||
Sbjct 105235 TGTCGTTGACGAAGGAGTTCATGATGCCCATGGCCTTGGAGGAGATGCCGGTGTCGGGGT 105294
Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544
| |||||||| |||||||||||
Sbjct 105295 GGACCTGCTTCAGCACCTTGTA 105316
Score = 149 bits (164), Expect = 8e-30
Identities = 154/202 (76%), Gaps = 0/202 (0%)
Strand=Plus/Plus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| ||||||| || ||| ||| | |||||||||||| ||||||||||| | | | ||
Sbjct 143457 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCTGGAGGTGA 143516
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| || ||||||||| | |||||||| ||| ||||| ||||||| |||| |
Sbjct 143517 TGGTCGAGCGCTTGTTGTAATGCGCCAGGCGGGAAGCCTCACCCGCGATGCGCTCGAAGA 143576
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
|||||||||| || |||||||||| ||| | |||| ||||||||| ||||||||
Sbjct 143577 TGTCGTTGACGAAGGAGTTCATGATGCCCATGGCCTTGGAGGAGATGCCGGTGTCGGGGT 143636
Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544
| |||||||| |||||||||||
Sbjct 143637 GGACCTGCTTCAGCACCTTGTA 143658
Score = 149 bits (164), Expect = 8e-30
Identities = 154/202 (76%), Gaps = 0/202 (0%)
Strand=Plus/Minus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| |||||||||| || ||| | |||||||||||| ||||||||||| | | | ||
Sbjct 230435 GCTTGGCCAGTTCTCCAGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCTGGAGGTGA 230376
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| || ||||||||| | |||||||| ||| |||||| | ||||||| |||| |
Sbjct 230375 TGGTCGAGCGCTTGTTGTAATGCGCCAGGCGGGAAGCCTCGCCGGCGATGCGCTCGAAGA 230316
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
|||| ||||| || || ||||||| ||| | |||| ||||||||| ||||||||
Sbjct 230315 TGTCATTGACGAAGGAATTCATGATGCCCATGGCCTTGGAGGAGATGCCGGTGTCGGGGT 230256
Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544
| |||||||| |||||||||||
Sbjct 230255 GGACCTGCTTCAGCACCTTGTA 230234
Score = 143 bits (158), Expect = 3e-28
Identities = 153/202 (76%), Gaps = 0/202 (0%)
Strand=Plus/Plus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| ||||||| || ||| ||| | |||||||||||| ||||||||||| | | | ||
Sbjct 118753 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCTGGAGGTGA 118812
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| || ||||||||| | |||||||| ||| ||||| ||||||| |||| |
Sbjct 118813 TGGTCGAGCGCTTGTTGTAATGCGCCAGGCGGGAAGCCTCACCCGCGATGCGCTCGAAGA 118872
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
|||||||||| || |||||||||| ||| | |||| |||||||| ||||||||
Sbjct 118873 TGTCGTTGACGAAGGAGTTCATGATGCCCATGGCCTTGGAAGAGATGCCGGTGTCGGGGT 118932
Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544
| |||||||| |||||||||||
Sbjct 118933 GGACCTGCTTCAGCACCTTGTA 118954
Score = 109 bits (120), Expect = 7e-18
Identities = 146/203 (72%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 1254346 TGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCG 1254405
|||| ||||| || ||| | |||||||||||| ||||||||||| | | | ||| |
Sbjct 513652 TGGCTAGTTCCCCAGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCTGGAGGTGATGG 513593
Query 1254406 TGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGT 1254465
| |||||||| | |||||||| ||| ||||| || | ||||| || | |||
Sbjct 513592 TTGAGCGCTTGTCATAATGCGCCAGGCGGGAAGCCTCATTGGCAATGCGCTCAAAATTGT 513533
Query 1254466 CGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCA 1254525
| | ||||| || ||||| | ||| | |||| ||||| || ||||||||| |
Sbjct 513532 CACTAACAAAAGAATTCATAATACTCATAGCCTTGGAAGAGATTCCAGTGTCGGGGTGAA 513473
Query 1254526 CCTGCTTGAGCACCTTGTAGATG 1254548
||||||| || ||||||||||||
Sbjct 513472 CCTGCTTCAGTACCTTGTAGATG 513450
>seq826
Length=424606
Score = 156 bits (172), Expect = 5e-32
Identities = 156/202 (77%), Gaps = 4/202 (2%)
Strand=Plus/Plus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| ||||||| || ||| ||| | |||||||||||| ||||||||||| || | |||
Sbjct 38877 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCGGGAAGCGA 38936
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| || |||||||| | |||||||| ||| |||||| | |||||| |||| |
Sbjct 38937 TGGT----CGCTTGTTGTAATGCGCCAGGCGGGAAGCCTCGCCGGCGATGCACTCGAAGA 38992
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
|||||||||| || |||||||||| ||| | |||| ||||||||| ||||||||
Sbjct 38993 TGTCGTTGACGAAGGAGTTCATGATGCCCATGGCCTTGGAGGAGATGCCGGTGTCGGGGT 39052
Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544
|||||||||| |||||||||||
Sbjct 39053 GCACCTGCTTCAGCACCTTGTA 39074
>seq1086
Length=61194
Score = 152 bits (168), Expect = 6e-31
Identities = 155/202 (77%), Gaps = 0/202 (0%)
Strand=Plus/Plus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| ||||||| || ||| ||| | |||||||||||| ||||||||||| | | | ||
Sbjct 45114 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCTGGAGGTGA 45173
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| || ||||||||| | |||||||| ||| |||||| ||||||| |||| |
Sbjct 45174 TGGTCGAGCGCTTGTTGTAATGCGCCAGGCGGGAAGCCTCGCCCGCGATGCGCTCGAAGA 45233
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
|||||||||| || |||||||||| ||| | |||| ||||||||| ||||||||
Sbjct 45234 TGTCGTTGACGAAGGAGTTCATGATGCCCATGGCCTTGGAGGAGATGCCGGTGTCGGGGT 45293
Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544
| |||||||| |||||||||||
Sbjct 45294 GGACCTGCTTCAGCACCTTGTA 45315
>seq787
Length=392654
Score = 152 bits (168), Expect = 6e-31
Identities = 155/202 (77%), Gaps = 0/202 (0%)
Strand=Plus/Minus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| ||||||| || ||| ||| | |||||||||||| ||||||||||| | | | ||
Sbjct 20894 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCTGGAGGTGA 20835
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| || ||||||||| | |||||||| ||| |||||| ||||||| |||| |
Sbjct 20834 TGGTCGAGCGCTTGTTGTAATGCGCCAGGCGGGAAGCCTCGCCCGCGATGCGCTCGAAGA 20775
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
|||||||||| || |||||||||| ||| | |||| ||||||||| ||||||||
Sbjct 20774 TGTCGTTGACGAAGGAGTTCATGATGCCCATGGCCTTGGAGGAGATGCCGGTGTCGGGGT 20715
Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544
| |||||||| |||||||||||
Sbjct 20714 GGACCTGCTTCAGCACCTTGTA 20693
>seq189
Length=6620563
Score = 152 bits (168), Expect = 6e-31
Identities = 155/202 (77%), Gaps = 0/202 (0%)
Strand=Plus/Minus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| ||||||| |||||| ||| | |||||||||||| |||||||||||||| | ||
Sbjct 6328948 GCTTGGCCAGCTCGCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCGCGGGACGTGA 6328889
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| || ||||||||| |||||||||| ||| ||||| ||||||| |||| |
Sbjct 6328888 TGGTCGAGCGCTTGTTGTAGTGCGCCAGGCGGGACGCCTCCCCCGCGATGCGCTCGAAGA 6328829
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
|||||||||| || |||||||||| ||| | |||| || ||||| ||||||||
Sbjct 6328828 TGTCGTTGACGAAGGAGTTCATGATGCCCATGGCCTTGGATGAAATGCCGGTGTCGGGGT 6328769
Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544
| |||||||| |||||||||||
Sbjct 6328768 GGACCTGCTTCAGCACCTTGTA 6328747
Score = 152 bits (168), Expect = 6e-31
Identities = 155/202 (77%), Gaps = 0/202 (0%)
Strand=Plus/Minus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| ||||||| |||||| ||| | |||||||||||| |||||||||||||| | ||
Sbjct 6384052 GCTTGGCCAGCTCGCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCGCGGGACGTGA 6383993
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| ||| ||||||||| |||||||||| ||| ||||| ||||||| |||| |
Sbjct 6383992 TGGTGGAGCGCTTGTTGTAGTGCGCCAGGCGGGACGCCTCCCCCGCGATGCGCTCGAAGA 6383933
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
|||||||||| || |||||||||| ||| | || |||||||| ||||||||
Sbjct 6383932 TGTCGTTGACGAAGGAGTTCATGATGCCCATGGCTTTCGACGAGATGCCGGTGTCGGGGT 6383873
Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544
| |||||||| |||||||||||
Sbjct 6383872 GGACCTGCTTCAGCACCTTGTA 6383851
Score = 87.8 bits (96), Expect = 2e-11
Identities = 143/204 (70%), Gaps = 3/204 (1%)
Strand=Plus/Minus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| ||||||| | |||| ||| | |||||| ||||||||||||||||| | | ||
Sbjct 6359423 GCTTGGCCAGCTGGCCGGGCAGCAGTAGGCGCTCGGCGGTCTGGATCTCGGGGGATGTGA 6359364
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGAC--GGCCGGCCTCGGTGCCGATGCGGTCGAT 1254460
|| ||||| ||| |||||||| ||| || | ||||| | ||||||| ||
Sbjct 6359363 CGGTAGAGCGCTGGTTGTAGTGCGCCGGACAAGGAC-GCCTCCGACGCGATGCGCTCAGA 6359305
Query 1254461 CATGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGG 1254520
|||||||||| ||| ||||||| || || || | | ||||||| ||||||
Sbjct 6359304 GATGTCGTTGAGAAAAGAGTTCAAGATGCCCACCGCCAAGGACGAGATGCTGGTGTCGGG 6359245
Query 1254521 GTGCACCTGCTTGAGCACCTTGTA 1254544
||| ||| || | |||| || |||
Sbjct 6359244 GTGGACCCGCCTCAGCATCTCGTA 6359221
>seq257
Length=3199652
Score = 145 bits (160), Expect = 9e-29
Identities = 154/202 (76%), Gaps = 1/202 (0%)
Strand=Plus/Plus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| ||||||| || ||| || | |||||||||||| ||||||||||| | | | ||
Sbjct 3166050 GCTTGGCCAGCTCCCCGGGCGGCAGCAGGCGCACGGCTGTCTGGATCTCCCTGGAGGTGA 3166109
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| || |||||||| | |||||||| ||| |||||| ||||||| |||| |
Sbjct 3166110 TGGTCGAGCGCTTGTGTAA-TGCGCCAGGCGGGAAGCCTCGCCCGCGATGCGCTCGAAGA 3166168
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
|||||||||| || |||||||||| ||| | |||| ||||||||| ||||||||
Sbjct 3166169 TGTCGTTGACGAAGGAGTTCATGATGCCCATGGCCTTGGAGGAGATGCCGGTGTCGGGGT 3166228
Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544
|||||||||| |||||||||||
Sbjct 3166229 GCACCTGCTTCAGCACCTTGTA 3166250
>seq127
Length=5421774
Score = 131 bits (144), Expect = 2e-24
Identities = 150/202 (74%), Gaps = 0/202 (0%)
Strand=Plus/Minus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| ||||||| || || ||| | ||||||||| || ||||||||||| | | | ||
Sbjct 3875732 GCTTGGCCAGCTCCCCAGGCAGCAACAGGCGCACAGCCGTCTGGATCTCTCTGGAGGTGA 3875673
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| || || |||||| | || ||||| ||| |||||| ||||||| | || |
Sbjct 3875672 TGGTCGAGCTCTTGTTGTAATGTGCCAGGCGGGAAGCCTCGCCCGCGATGCGCTTGAAGA 3875613
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
|||||||||| || |||||||||| ||| | |||| ||||||||| ||||||||
Sbjct 3875612 TGTCGTTGACGAAGGAGTTCATGATGCCCATGGCCTTGGAGGAGATGCCGGTGTCGGGGT 3875553
Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544
| |||||||| |||||||||||
Sbjct 3875552 GGACCTGCTTCAGCACCTTGTA 3875531
>seq599
Length=1005688
Score = 113 bits (124), Expect = 6e-19
Identities = 146/202 (72%), Gaps = 0/202 (0%)
Strand=Plus/Minus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| ||||||| || || || | |||| ||||||| ||||||||||| | | ||
Sbjct 294295 GCTTGGCCAGCTCCCCAGCCAGCAGCAGGAGCACGGCCGTCTGGATCTCCTTGGAGGTGA 294236
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| || | ||||||| | ||| |||| ||| |||| | ||||||| || | |
Sbjct 294235 TGGTCGAGGGCTTGTTGCAATGCACCAGGCGGGAAGCCTTGCCCACGATGCGCTCAAAGA 294176
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
|||||||||| || |||||||||| ||| | ||| | | |||||| ||||||||
Sbjct 294175 TGTCGTTGACGAAGGAGTTCATGATGCCCATGGCCTTCTAGAAGATGCTGGTGTCGGGGT 294116
Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544
|||||||||| |||||||||||
Sbjct 294115 GCACCTGCTTCAGCACCTTGTA 294094
>seq140
Length=5243153
Score = 96.9 bits (106), Expect = 4e-14
Identities = 100/131 (76%), Gaps = 0/131 (0%)
Strand=Plus/Plus
Query 1592165 ACCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTT 1592224
|| || ||||| | || || || || |||||| | |||||||| | |||| ||| ||
Sbjct 1455522 ACACTTTTTGAACTCATTCTGGCTGCAAACTACTTAGACATCAAAGGTTTGCTTGATGTT 1455581
Query 1592225 GGGTGCAAGTCTGTGGCCAACATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACC 1592284
|||||| |||| ||||| ||||||||||| || | || |||||||| |||||||||
Sbjct 1455582 ACATGCAAGACTGTTGCCAATATGATCAAGGGGAAAACTCCTGAGGAGATTCGCAAGACC 1455641
Query 1592285 TTTAACATCAA 1592295
|| || |||||
Sbjct 1455642 TTCAATATCAA 1455652
>seq29
Length=11376298
Score = 93.3 bits (102), Expect = 5e-13
Identities = 99/131 (76%), Gaps = 0/131 (0%)
Strand=Plus/Minus
Query 1592165 ACCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTT 1592224
|| || ||||| | || || || || |||| | | |||||||| | |||| ||| ||
Sbjct 6003654 ACACTTTTTGAACTCATTCTGGCTGCAAACTTCTTAGACATCAAAGGTTTGCTTGATGTT 6003595
Query 1592225 GGGTGCAAGTCTGTGGCCAACATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACC 1592284
|||||| |||| ||||| ||||||||||| || | || |||||||| |||||||||
Sbjct 6003594 ACATGCAAGACTGTTGCCAATATGATCAAGGGGAAAACTCCTGAGGAGATTCGCAAGACC 6003535
Query 1592285 TTTAACATCAA 1592295
|| || |||||
Sbjct 6003534 TTCAATATCAA 6003524
>seq2
Length=18007423
Score = 93.3 bits (102), Expect = 5e-13
Identities = 89/114 (78%), Gaps = 0/114 (0%)
Strand=Plus/Minus
Query 869830 CACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTTTGTACATCTCCCATACTTGCTG 869889
|||||||||||||||||||| |||||||| ||||| |||||||||| ||| | | ||
Sbjct 1937731 CACCTCCTCGGCGGTCCAGAAGGAGGCCTCCGCCTTCTTGTACATCTGCCAGATATCGTG 1937672
Query 869890 GTAGCGGATAGGGAAGAGGACAAAGCGGTTGGGGTTGTCGCGCAACAGGGGTTC 869943
||| ||| ||||| | |||||||||| ||||| || | || ||| || ||
Sbjct 1937671 GTACTCGATGGGGAAAATGACAAAGCGGCGCGGGTTCTCTCTCAGCAGCGGCTC 1937618
>seq77
Length=13607169
Score = 91.5 bits (100), Expect = 2e-12
Identities = 86/110 (78%), Gaps = 0/110 (0%)
Strand=Plus/Plus
Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245
|| || |||||| | |||||||| | |||| ||| || |||||| |||| |||||
Sbjct 8048537 GCTGCAAACTACTTAGACATCAAAGGTTTGCTTGATGTTACATGCAAGACTGTTGCCAAT 8048596
Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAA 1592295
||||||||||| || | || |||||||| ||||||||||| || |||||
Sbjct 8048597 ATGATCAAGGGGAAAACTCCTGAGGAGATTCGCAAGACCTTCAATATCAA 8048646
>seq4
Length=15321207
Score = 86.0 bits (94), Expect = 8e-11
Identities = 94/125 (75%), Gaps = 0/125 (0%)
Strand=Plus/Plus
Query 1592171 TTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGC 1592230
||||| | || || || || |||||| | |||||||| | |||| ||| || |||
Sbjct 875241 TTTGAACTCATTCTGGCTGCAAACTACTTAGACATCAAAGGTTTGCTTGATGTTACATGC 875300
Query 1592231 AAGTCTGTGGCCAACATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAAC 1592290
||| |||| ||||| |||||| ||| || | || |||||||| ||||||||||| ||
Sbjct 875301 AAGACTGTTGCCAATATGATCGTGGGGAAAACTCCTGAGGAGATTCGCAAGACCTTCAAT 875360
Query 1592291 ATCAA 1592295
|||||
Sbjct 875361 ATCAA 875365
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 6106551945128452
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |