Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cebus_20capucinus_20imitator_20[refseq_20GCF_5F001604975.1_202016-
04-04] 7,156 sequences; 2,717,703,182 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq170 134 1e-26
seq585 131 2e-25
seq434 125 6e-24
seq683 116 3e-21
seq276 116 3e-21
seq38 113 4e-20
seq69 111 1e-19
seq290 107 2e-18
seq487 104 2e-17
seq25 104 2e-17
seq407 102 7e-17
seq19 102 7e-17
seq231 100 3e-16
seq41 98.7 9e-16
seq1 98.7 9e-16
seq34 96.9 3e-15
seq83 95.1 1e-14
seq93 87.8 2e-12
seq62 87.8 2e-12
seq247 84.2 2e-11
seq112 84.2 2e-11
seq351 82.4 7e-11
>seq170
Length=4466143
Score = 134 bits (148), Expect = 1e-26
Identities = 166/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||||||||| | || || || |||||||| || || || || || || || |||
Sbjct 3883227 ATGCAGATCTTCGTGAAGACCCTGACCGGTAAGACCATCACCCTTGAGGTGGAGCCCAGT 3883168
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || |||||||||||||| ||||| || ||||| || ||
Sbjct 3883167 GACACCATTGAGAACGTCAAGGCCAAGATCCAAGACAAGGAAGGCATCCCTCCTGACCAG 3883108
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| | ||||||||||| |||||||||||||| ||| | | | | | || || || |||
Sbjct 3883107 CAGAGATTGATCTTTGCTGGGAAACAGCTGGAAGATGGGCGCACCCTATCTGACTACAAC 3883048
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
|| || ||||| || || || |||||||| |||| ||| | || ||
Sbjct 3883047 ATCCAGAAGGAGTCCACTCTGCACTTGGTCCTGCGCTTGAGGGGGGG 3883001
Score = 125 bits (138), Expect = 6e-24
Identities = 155/212 (73%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 24701 ACGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCC 24760
|| ||||||||||| | || || || ||||| || || || || ||||| || || ||
Sbjct 3883458 ACAATGCAGATCTTCGTGAAGACACTGACCGGCAAGACCATCACCCTCGAGGTGGAGCCC 3883399
Query 24761 ACCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGAT 24820
| ||||| | || | || || ||||||||| ||||| ||||| || ||||| ||
Sbjct 3883398 AGTGACACCATTGAGAACGTCAAGGCAAAGATCCAGGACAAGGAAGGCATCCCTCCTGAC 3883339
Query 24821 CAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTAT 24880
|| || | |||||||||||||| || |||||||| ||| | | | | |||| || ||
Sbjct 3883338 CAGCAGAGGTTGATCTTTGCCGGAAAGCAGCTGGAAGATGGGCGCACCCTGTCTGACTAC 3883279
Query 24881 AACATTCAAAAGGAATCGACACTACACTTGGT 24912
||||| ||||| || || || || ||| ||||
Sbjct 3883278 AACATCCAAAAAGAGTCCACCCTTCACCTGGT 3883247
>seq585
Length=1056956
Score = 131 bits (144), Expect = 2e-25
Identities = 165/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||||||||| | || || || |||||||| || || || ||||| || || |||
Sbjct 518879 ATGCAGATCTTCTTGAAGACCCTGACCGGTAAGACCATCACCCTCGAGGTGGAGCCCAGT 518820
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || |||||||||||||| ||||| | ||||| || ||
Sbjct 518819 GACACCATTGAGAACGTCAAGGCCAAGATCCAAGACAAGGAAGGCACCCCTCCTGACCAG 518760
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| | ||||||||||| |||||||||||||| ||| | | | | | || || || |||
Sbjct 518759 CAGAGATTGATCTTTGCTGGGAAACAGCTGGAAGATGGGCGCACCCTATCTGACTACAAC 518700
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
|| || |||| || || || |||||||| |||| ||| | || ||
Sbjct 518699 ATCCAGGAGGAGTCCACTCTGCACTTGGTCCTGCGCTTGAGGGGGGG 518653
Score = 113 bits (124), Expect = 4e-20
Identities = 151/210 (72%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
|||||||||||| | || || || || ||||| || || | || || || || |||
Sbjct 519108 GATGCAGATCTTCGTGAAGACACTGACTGGTAAGACCATCGCCCTTGAGGTGGAGCCCAG 519049
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
||||| | || | || || ||||||||| ||||| ||||| | ||||| || ||
Sbjct 519048 TGACACCATTGAGAATGTCAAGGCAAAGATCCAGGACAAGGAAGGCACCCCTCCTGACCA 518989
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
| | |||||||||||| ||||||||||||| ||| | | | | |||| || || ||
Sbjct 518988 GTAGAGATTGATCTTTGCCTGGAAACAGCTGGAAGATGGGCGCACCTTGTCTGACTACAA 518929
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGT 24912
||| || || || || || |||||| ||||
Sbjct 518928 CATCCAGAAAGAGTCCACGCTACACCTGGT 518899
Score = 111 bits (122), Expect = 1e-19
Identities = 149/205 (73%), Gaps = 2/205 (1%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||||||| | || || || || ||||| || || || || || || || |||
Sbjct 519335 ATGCAGATCTTTGTGAAGACCCTGACTGGTAAGACCATCACCCTTGAGGTCGAGCCCAGT 519276
Query 24764 GACAC-AGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
||||| | || |||| || |||| |||| | ||||| ||||| || ||||| || ||
Sbjct 519275 GACACCATTAAGAACGTCAAGGCAAA-GATCTAGGACAAGGAAGGCATCCCTCCTGACCA 519217
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
|| | ||||||||||| || || |||||||| ||| | | | | |||| || || ||
Sbjct 519216 GCAGAGGTTGATCTTTGCTGGAAAGCAGCTGGAAGATGGGCGCACCTTGTCTGACTACAA 519157
Query 24883 CATTCAAAAGGAATCGACACTACAC 24907
||| || || || || || ||||||
Sbjct 519156 CATCCAGAAAGAGTCCACTCTACAC 519132
>seq434
Length=1819716
Score = 125 bits (138), Expect = 6e-24
Identities = 164/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||| || | ||||| || || || || || || || ||||| || ||| || |
Sbjct 1331508 ATGCAGATTTTCGTGAAAACCCTTACAGGGAAGACCATCACCCTCGAGGTTGAACCCTCG 1331449
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
|| || |||||| ||||| |||||||| || || |||||||| ||||| |||||
Sbjct 1331448 GATACGATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGATCAG 1331389
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
||| | |||||||||| || || || ||||| ||| | | |||| || ||||||
Sbjct 1331388 CAAAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTATAAC 1331329
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
||||| ||||| || || || || | |||||| || | || || ||
Sbjct 1331328 ATTCAGAAGGAGTCTACTCTTCATCTTGTGTTGAGACTTCGTGGTGG 1331282
>seq683
Length=714717
Score = 116 bits (128), Expect = 3e-21
Identities = 172/241 (71%), Gaps = 2/241 (1%)
Strand=Plus/Minus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
||||||||||||| | || || || | || || || || || || || || || |||
Sbjct 111603 GATGCAGATCTTTGTGAAGACCCTCATGGGCAAGACCATCACCCTTGAGGTCGAGCCCAG 111544
Query 24763 CGACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATC 24821
||||| | || || | |||| | ||| || |||||||| || || || || || ||||
Sbjct 111543 TGACACCATTGAGAATGTTAAAGCCAAA-ATTCAAGACAAGGAGGGTATCCCACCTGATC 111485
Query 24822 AACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATA 24881
| || ||| |||| |||||||| ||| ||||||||||| | | | ||||| || |
Sbjct 111484 AGCAGCGTCTGATATTTGCCGGTAAATAGCTGGAGGATGGCCGCACGCTCTCAGACTACA 111425
Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCGGAACTGAGC 24941
|||| || || || || || || ||| ||||| |||| |||| || ||| | |||||
Sbjct 111424 ACATCCAGAAAGAGTCCACCCTGCACCTGGTGCTGCGCCTGCGAGGTGGCATTATTGAGC 111365
Query 24942 C 24942
|
Sbjct 111364 C 111364
>seq276
Length=3089952
Score = 116 bits (128), Expect = 3e-21
Identities = 153/213 (72%), Gaps = 7/213 (3%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||| || || ||||| || | || || || || || || || || ||| || |
Sbjct 1637883 ATGCAGATTTTCATGAAAACCCTTATGGGGAAGACCATCACCCTTGAGGTTGAACCCTCA 1637942
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
|| ||| |||||| ||||| |||||||| || || |||||||| ||||| |||||
Sbjct 1637943 GATACAATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGATCAG 1638002
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
||| | |||||||||| || || || ||||| || | |||| || ||||||
Sbjct 1638003 CAAAGACTGATCTTTGCTGGCAAGCAACTGGA-------AGGACTTTGTCTGACTATAAC 1638055
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTG 24916
||||| ||||| || || || || | ||||||
Sbjct 1638056 ATTCAGAAGGAGTCTACTCTTCATCTTGTGTTG 1638088
>seq38
Length=10264441
Score = 113 bits (124), Expect = 4e-20
Identities = 172/241 (71%), Gaps = 3/241 (1%)
Strand=Plus/Plus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
||||||||||||| | || || || | || || || || || || || || || |||
Sbjct 9540646 GATGCAGATCTTTGTGAAGACCCTCATGGGCAAGACCATCACCCTTGAGGTCGA-GCCCG 9540704
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
||||| | || | || ||| || || |||||||| || || || || || || ||
Sbjct 9540705 TGACACCATTGAGAATGTCAAAGCCAAAATTCAAGACAAGGAGGGTATCCCACCTGACCA 9540764
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGAT-TCGAGAAACATGTCAGATTATA 24881
|| ||| |||| |||||||| ||||||||||||||| | | | || | ||||| || |
Sbjct 9540765 GCAGCGTCTGATATTTGCCGGCAAACAGCTGGAGGATGGCCACACAC-TCTCAGACTACA 9540823
Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCGGAACTGAGC 24941
|||| || || || || || || ||| ||||| |||| |||| || ||| | |||||
Sbjct 9540824 ACATCCAGAAAGAGTCCACCCTGCACCTGGTGCTGCGCCTGCGAGGTGGCATTATTGAGC 9540883
Query 24942 C 24942
|
Sbjct 9540884 C 9540884
>seq69
Length=11786368
Score = 111 bits (122), Expect = 1e-19
Identities = 163/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||| || | ||||| || || || || || || | ||||| || ||| ||
Sbjct 9297011 ATGCAGATTTTCGTGAAAACCCTTACAGGGAAGACCATCAACCTCGAGGTTGAACCCTTG 9297070
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
|| || ||||| ||||| ||||||||||| || ||||| || ||||| |||||
Sbjct 9297071 GATACTACAGAAAATGTAAAGGCCAAGATCCAAGATAAGGAAGGCATTCCTCCTGATCAG 9297130
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAAC-ATGTCAGATTATAA 24882
||| | |||||||||| || || || ||||| || | ||| || |||| || || ||
Sbjct 9297131 CAAAGACTGATCTTTGCTGGCAAGCAACTGGAAGA-TGGAGGTACTTTGTCTGACTACAA 9297189
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
|||||| ||||| || || || || | |||||| || | || || ||
Sbjct 9297190 CATTCAGAAGGAGTCTACTCTTCATCTTGTGTTGAGACTTCGTGGTGG 9297237
>seq290
Length=2922102
Score = 107 bits (118), Expect = 2e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||| ||| | ||||| || | || || || || || ||||| | ||| | |
Sbjct 1757767 ATGCAGATTTTTGTGAAAACCCTTATGGGGAAGACCATCACCCTCGAGGCTGAACCTTCG 1757708
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
|| || |||||| ||||| |||||||| || ||||||||||| ||| |||||
Sbjct 1757707 GATACGATAGAAAATGTAAAGTCCAAGATCCAGGATAAAGAAGGAATTCCTTGTGATCAG 1757648
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
||| | |||||||||| || || || ||||| ||| | | |||| || || |||
Sbjct 1757647 CAAAGGCTGATCTTTGCTGGCAAGCAACTGGAAGATGGATGTACTTTGTCTGACTACAAC 1757588
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
||||||||||| || | || || | |||||| || | || || ||
Sbjct 1757587 ATTCAAAAGGAGTCTATTCTTCATCTTGTGTTGAGACTTCGTGGTGG 1757541
>seq487
Length=2137387
Score = 104 bits (114), Expect = 2e-17
Identities = 160/226 (71%), Gaps = 2/226 (1%)
Strand=Plus/Minus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
||||||||||| | | || || || || ||||| || || || || || || || |||
Sbjct 1405448 GATGCAGATCTCTGTGAAGACCCTCACGGGTAAGACCATCACCCTTGAGGTCGAGCCCAG 1405389
Query 24763 CGACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATC 24821
||||| | || || | |||| | ||| || |||||||| | || || || || || |
Sbjct 1405388 TGACACCATTGAGAATGTTAAATCCAAA-ATTCAAGACAAGGTGGGTATCCCACCTGACC 1405330
Query 24822 AACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATA 24881
| || || |||| |||||||| |||||||||||||| | | | ||||| || |
Sbjct 1405329 AGCAGTGTCTGATATTTGCCGGCCAACAGCTGGAGGATGGCCGCACGCTCTCAGACTACA 1405270
Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGG 24927
|||| || || || || || || ||| ||||| |||| |||| ||
Sbjct 1405269 ACATCCAGAAAGAGTCCACCCTGCACCTGGTGCTGCGCCTGCGAGG 1405224
>seq25
Length=15232693
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||| || || ||||| || || | || ||||| | ||| | | ||| || |
Sbjct 12145467 ATGCAGATTTTCATGAAAACTCTTACGGAGAAGACTATCATCCTCCAGGCTGAACCCTCA 12145408
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
|| || ||||| ||||| |||||||| || || |||||||| ||||| |||||
Sbjct 12145407 GATACGAAAGAAAACGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGATCAG 12145348
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
||| | |||||| ||| || || || || || ||| | | |||| || || |||
Sbjct 12145347 CAAAGACTGATCTATGCTGGCAAGCAACTAGAAGATGGATGTACTCTGTCTGACTACAAC 12145288
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
||||||||||| || || || || ||||| || || | || || ||
Sbjct 12145287 ATTCAAAAGGAGTCTACTCTTCATCTGGTGCTGAGACTTCGTGGTGG 12145241
>seq407
Length=3256691
Score = 102 bits (112), Expect = 7e-17
Identities = 166/239 (69%), Gaps = 0/239 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||||||| | || || || || || || || || || || || || || |||
Sbjct 904445 ATGCAGATCTTTGTGAAGACCCTCACGGGCAAGACCATCACCCTTGAGGTCGAGCCCAAT 904386
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || ||| || || |||||||| || || || || || || ||
Sbjct 904385 GACACCATTGAGAATGTCAAAGCCAAAATTCAAGACAAGGAGGGTATCCCACCTGACCAG 904326
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| ||| |||| |||||| | | |||||||||||| | | | ||||| || |||
Sbjct 904325 CAGCGTCTGATATTTGCCAGCCAGCAGCTGGAGGATGGCCGCACGCTCTCAGACTACAAC 904266
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCGGAACTGAGCC 24942
|| || || || || || || ||| ||||| |||| |||| || ||| | ||||||
Sbjct 904265 ATCCAGAAAGAGTCCACCCTGCACCTGGTGCTGCGCCTGCGAGGTGGCATTATTGAGCC 904207
>seq19
Length=20362211
Score = 102 bits (112), Expect = 7e-17
Identities = 152/216 (70%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||| ||| | ||||| || | | | || || || || || | ||| || |
Sbjct 6160345 ATGCAGATTTTTCTGAAAACCCTTATGAGGGAGACCATCACCCTTGAGTTTGAAACCTCG 6160404
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
|| | | |||||| ||||| |||||||| || ||||||||||| ||||| |||||
Sbjct 6160405 GATATAATAGAAAATGTAAAGGCCAAGATCCAGGATAAAGAAGGAATTCCTCCTGATCAG 6160464
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
||| | |||||||||| || || || ||||| || | | |||| || || |||
Sbjct 6160465 CAAAGACTGATCTTTGCTGGCAAGCAACTGGAAGACGGACGTACTTTGTCTGACTACAAC 6160524
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGA 24919
||||||||||| | || || || | |||||| ||
Sbjct 6160525 ATTCAAAAGGAGTTTACTCTTCATCTTGTGTTGAGA 6160560
>seq231
Length=3498576
Score = 100 bits (110), Expect = 3e-16
Identities = 150/213 (70%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 24700 TACGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGC 24759
|| ||||||||| || | || || || || ||||| || || || || || || || |
Sbjct 69786 TAGGATGCAGATATTAGTGAAGACCCTGACTGGTAAGACCATCACCCTTGAGGTCGAGCC 69727
Query 24760 CACCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGA 24819
|| ||||| | || | || || ||||||||| ||||| ||||| || ||||| ||
Sbjct 69726 CAGTGACACCATTGAGAACGTCAAGGCAAAGATCCAGGACAAGGAAGGCATCCCTCCTGA 69667
Query 24820 TCAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTA 24879
|| | | ||||||||||| || || |||||||| ||| | | | |||| || ||
Sbjct 69666 CCAGCGGAGGTTGATCTTTGCTGGAAAGCAGCTGGAAGATGGGCACACCCTGTCTGACTA 69607
Query 24880 TAACATTCAAAAGGAATCGACACTACACTTGGT 24912
||||| ||||| || || || ||| | ||||
Sbjct 69606 CAACATCCAAAAAGAGTCCACTCTATATCTGGT 69574
>seq41
Length=9995516
Score = 98.7 bits (108), Expect = 9e-16
Identities = 144/201 (72%), Gaps = 2/201 (1%)
Strand=Plus/Plus
Query 24701 ACGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCC 24760
|| ||||||||||| | || || || || || || || || || ||||| || || ||
Sbjct 7312092 ACAATGCAGATCTTCGTGAAGACTCTGACTGGCAAGACCATCACCCTCGAGGTCGAGCCC 7312151
Query 24761 ACCGACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGA 24819
||||| | || ||||| || | ||||||||| ||||||||||| || ||||| ||
Sbjct 7312152 GGTGACACCATTGAGAACGGCAAGGC-AAAGATCCAGGACAAAGAAGGCATCCCTCCTGA 7312210
Query 24820 TCAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTA 24879
|| || | | |||||||| |||||||||||||| ||| | | | | || || ||
Sbjct 7312211 CCAGCAGAGATCCATCTTTGCTGGGAAACAGCTGGAAGATGGATGCACCCTATCTGACTA 7312270
Query 24880 TAACATTCAAAAGGAATCGAC 24900
||||| || || || || ||
Sbjct 7312271 CAACATCCAGAAAGAGTCCAC 7312291
>seq1
Length=21314971
Score = 98.7 bits (108), Expect = 9e-16
Identities = 154/217 (71%), Gaps = 4/217 (2%)
Strand=Plus/Plus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
||||||||||||| | || || | || || || || || || || || || || |||
Sbjct 18630931 GATGCAGATCTTTGTGAAGACTGTCACGGGCAAGACCATCACCCTTGAGGTCGAGCCCAG 18630990
Query 24763 CGACA-CAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATC 24821
|||| || || || | ||| | ||| || ||| |||| ||||| || || || || |
Sbjct 18630991 TGACACCATTAAGAATGTCAAAGCCAAA-ATTCAATACAAGGAAGGTATCCCACCTGACC 18631049
Query 24822 AACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATA 24881
| || ||| |||| ||||| || ||||||||||||||| | | | ||||| || |
Sbjct 18631050 AGCAGCGTCTGATATTTGCTGGTAAACAGCTGGAGGATGGCCGCA--CTCTCAGACTACA 18631107
Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918
|||| || || || || || || ||| ||||| ||||
Sbjct 18631108 ACATCCAGAAAGAGTCCACCCTGCACCTGGTGCTGCG 18631144
Score = 86.0 bits (94), Expect = 6e-12
Identities = 148/215 (69%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
||| ||||||||| | || || || | || || || || || || || || || |||
Sbjct 4712364 GATACAGATCTTTGTGAAGACCCTCATGGGCAAGACCATCACCCTTGAGGTCGAGCCCAG 4712423
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
||||| || | || ||| || || |||||||| || | || || || || ||
Sbjct 4712424 TGACACCACTGAGAATGTCAAAGCCAAAATTCAAGACAAGGAGGCTATCCCACCTGACCA 4712483
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
|| ||| |||| |||||||| ||||||||||||||| | | | ||||| || ||
Sbjct 4712484 GCAGCGTCTGATGTTTGCCGGCAAACAGCTGGAGGATGGCTGCACGCTCTCAGACTACAA 4712543
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGC 24917
||| || || || || | || ||| ||||| |||
Sbjct 4712544 CATCCAGAAAGAGTCCAACCTGCACCTGGTGCTGC 4712578
>seq34
Length=10557659
Score = 96.9 bits (106), Expect = 3e-15
Identities = 139/194 (72%), Gaps = 4/194 (2%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||| ||| | ||||| | | || || | || || ||||| || ||| || ||
Sbjct 1465529 ATGCAGATTTTTGTGAAAACCCCCATGGGGAAGATCATCACCCTCGAGGTTGAATCCTCC 1465588
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
| || |||||| ||||| |||||||| || || |||||||| ||||| |||||
Sbjct 1465589 GGTACGATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGATCAG 1465648
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| | |||||||||| || || || ||||| ||| || | || | || || |||
Sbjct 1465649 GAAAGACTGATCTTTGCTGGCAAGCAACTGGAAGATG-GACATACTTT---GACTACAAC 1465704
Query 24884 ATTCAAAAGGAATC 24897
||||||||||| ||
Sbjct 1465705 ATTCAAAAGGAGTC 1465718
>seq83
Length=10167762
Score = 95.1 bits (104), Expect = 1e-14
Identities = 134/186 (72%), Gaps = 2/186 (1%)
Strand=Plus/Minus
Query 24731 GGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGAAACGGTAAAACAAAAG 24790
|| ||||| || || || || || ||| || | || || |||||| |||| |||
Sbjct 3734496 GGGAAAACCATCACCCTTGAGGTTGAACCCTCAGATACGATAGAAAACATAAAGGCCAAG 3734437
Query 24791 ATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAACAG 24850
||||| || || |||||||| ||||| ||||| ||| | |||||||||| || || ||
Sbjct 3734436 ATCCAGGATAAGGAAGGAATCCCTCCTGATCAGCAAAGACTGATCTTTGCTGGCAAGCAA 3734377
Query 24851 CTGGAGGATTCGAGAAACAT-GTCAGATTATAACATTCAAAAGGAATCGACACTACACTT 24909
||||| ||| || | | | ||| || || || ||||||||||| || || || || |
Sbjct 3734376 CTGGAAGATG-GACATATTTTGTCTGACTACAATATTCAAAAGGAGTCTACTCTTCATCT 3734318
Query 24910 GGTGTT 24915
|||||
Sbjct 3734317 TGTGTT 3734312
>seq93
Length=13160294
Score = 87.8 bits (96), Expect = 2e-12
Identities = 108/148 (73%), Gaps = 0/148 (0%)
Strand=Plus/Minus
Query 24772 AGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTT 24831
||||| ||||| |||||||| || || |||||||| ||||| ||||| ||| | |
Sbjct 4738502 AGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGATCAGCAAAGACT 4738443
Query 24832 GATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAA 24891
||||||||| || || || ||||| ||| | | || | || || |||||||||||
Sbjct 4738442 GATCTTTGCTGGCAAGCAACTGGAAGATGGTTGTACTTTGCCTGACTACAACATTCAAAA 4738383
Query 24892 GGAATCGACACTACACTTGGTGTTGCGA 24919
||| || || || || | |||||| ||
Sbjct 4738382 GGAGTCTACTCTTCATCTTGTGTTGAGA 4738355
>seq62
Length=12728985
Score = 87.8 bits (96), Expect = 2e-12
Identities = 144/201 (72%), Gaps = 5/201 (2%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||| ||| | ||| || || || ||||| | || ||| | || ||| ||
Sbjct 9567782 ATGCAGATTTTTGTGAAAGTCCTTACAGG-AAAACCACCACTCTCAAGGTTGAACCCTTG 9567724
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| |||||| || |||| |||||| ||||||||||||| |||| |||||
Sbjct 9567723 AACACAATAGAAATCCAAAGGCAAA-GATCCAGAACAAAGAAGGAATTTCTCCTGATCAG 9567665
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAAC-ATGTCAGATTATAA 24882
||| | |||||||||| || || || ||| |||| | || | || |||| | || |
Sbjct 9567664 CAAAGACTGATCTTTGCTGGCAAGCAACTGAAGGACT-GACATACTTTGTCTAACTA-CA 9567607
Query 24883 CATTCAAAAGGAATCGACACT 24903
|||||||||||| || || ||
Sbjct 9567606 CATTCAAAAGGAGTCTACTCT 9567586
>seq247
Length=3354634
Score = 84.2 bits (92), Expect = 2e-11
Identities = 167/242 (69%), Gaps = 4/242 (2%)
Strand=Plus/Minus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
||||||||||||| | | || || | || || || || || || || || || |||
Sbjct 2998450 GATGCAGATCTTTGTGAGGACCCTCAAAGGCAAGACCATCACCCTTGAGGTTGAGCCCAG 2998391
Query 24763 CGACAC-AGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATC 24821
||||| | || || | ||| | ||| || |||||||| || || || || | || |
Sbjct 2998390 TGACACCATTAAGAATGTCAAAGCCAAA-ATTCAAGACAAGGAGGGTATCCCATCTGACC 2998332
Query 24822 AACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGAT-TCGAGAAACATGTCAGATTAT 24880
| || | | |||| ||||| || ||||||||||||||| | | | | | ||||| |
Sbjct 2998331 AGCAGCATCTGATATTTGCTGGCAAACAGCTGGAGGATGGCCACAGTC-TCTCAGACTGC 2998273
Query 24881 AACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCGGAACTGAG 24940
||||| || || || || || || ||| ||||| |||| ||| || ||| | ||||
Sbjct 2998272 AACATCCAGAAAGAGTCCACCCTGCACCTGGTGCTGCGCCTGCAAGGTGGCATTATTGAG 2998213
Query 24941 CC 24942
||
Sbjct 2998212 CC 2998211
>seq112
Length=6082587
Score = 84.2 bits (92), Expect = 2e-11
Identities = 114/159 (72%), Gaps = 0/159 (0%)
Strand=Plus/Minus
Query 24701 ACGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCC 24760
|| ||||||||||| | || | || || || || || || || || || | || |
Sbjct 2083892 ACAATGCAGATCTTCGTGAAGGCTCTGACTGGCAAGACCATCACCCTTGAGATTGAGCCA 2083833
Query 24761 ACCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGAT 24820
| ||||| | || | || || ||| ||||| ||||| ||||| || ||||| ||
Sbjct 2083832 AGTGACACCATTGAGAATGTCAAGGCAAATATCCAGGACAAGGAAGGCATCCCTCCTGAC 2083773
Query 24821 CAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGAT 24859
||||| | ||||||||||| |||||||||||||| |||
Sbjct 2083772 CAACAGAGGTTGATCTTTGCTGGGAAACAGCTGGAAGAT 2083734
>seq351
Length=2412480
Score = 82.4 bits (90), Expect = 7e-11
Identities = 162/240 (68%), Gaps = 0/240 (0%)
Strand=Plus/Plus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
|||| | |||||| | || | || | || || || || || || || || || |||
Sbjct 786112 GATGTAAATCTTTGTGAAGATACTCATGGGCAAGACCATCACCCTTGAGGTCGAGTCCAG 786171
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
||||| || | || ||| || || ||||||||||| || || | || || ||
Sbjct 786172 TGACACCACTGAGAATGTCAAAGCCAAAATTCAAGACAAAGAGGGTATCTCACCTGACCA 786231
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
|| || ||||||||||||| ||| || |||||||| | | | ||||| || ||
Sbjct 786232 GCAGTGTCTGATCTTTGCCGGCAAAGAGATGGAGGATGGCCGCACTCTCTCAGACTACAA 786291
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCGGAACTGAGCC 24942
||| || || || || || || ||| ||||| || | |||| || ||| | ||||||
Sbjct 786292 CATCCAGAAAGAGTCCACCCTGCACCTGGTGCTGTGCCTGCGAGGTGGCATTATTGAGCC 786351
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449857356659680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |