Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cebus_20capucinus_20imitator_20[refseq_20GCF_5F001604975.1_202016-
04-04] 7,156 sequences; 2,717,703,182 total letters
Query= NC_023681.1
Length=152710
Score E
Sequences producing significant alignments: (Bits) Value
seq170 96.9 3e-15
seq25 82.4 7e-11
>seq170
Length=4466143
Score = 96.9 bits (106), Expect = 3e-15
Identities = 166/240 (69%), Gaps = 2/240 (1%)
Strand=Plus/Plus
Query 137185 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 137244
|| ||||| | ||| | || | |||| || || |||||||| |||||||| || |
Sbjct 3883229 CCCCCTCGGAGACGGAGGACCAGGTGAAGGGTGGACTCTTTTTGGATGTTGTAGTCAGAC 3883288
Query 137245 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 137304
| |||| | ||||| || || || || ||| |||||| | ||||| || |||||
Sbjct 3883289 AGGGTGCGCCCATCTTCCAGCTGCTTTCCGGCAAAGATCAACCTCTGCTGGTCAGGAGGG 3883348
Query 137305 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACT 137364
|||||||| ||||| || ||| || | | || | ||||| |||| || ||
Sbjct 3883349 ATGCCTTCCTTGTCCTGGATCTTTGCCTTGACGTTCTCAATGGTGTCACTGGGCTCCACC 3883408
Query 137365 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATAGCTTATGTTTTA 137424
|| | || | ||||||||||||| ||| || ||||| || ||||| | | |||||||
Sbjct 3883409 TCGAGGGTGATGGTCTTGCCGGTCAGTGTCTTCACGAAGATCTGCATTG--TCTGTTTTA 3883466
>seq25
Length=15232693
Score = 82.4 bits (90), Expect = 7e-11
Identities = 87/112 (78%), Gaps = 2/112 (2%)
Strand=Plus/Plus
Query 137208 ATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGC-TCGAGTCTTCGAGTT 137266
||||| ||||| || ||||| |||||||| || || || | || | ||||| ||||
Sbjct 12145264 ATGAAGAGTAGACTCCTTTTGAATGTTGTAGTCAGACAGAGTACATCCA-TCTTCTAGTT 12145322
Query 137267 GTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTC 137318
| || |||||||||||||| | ||||||||| ||||| || ||||| || ||
Sbjct 12145323 GCTTGCCAGCATAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATC 12145374
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 488500299739200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |