Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cebus_20capucinus_20imitator_20[refseq_20GCF_5F001604975.1_202016-
04-04] 7,156 sequences; 2,717,703,182 total letters
Query= NC_023719.1
Length=497513
Score E
Sequences producing significant alignments: (Bits) Value
seq81 89.7 2e-12
>seq81
Length=9863444
Score = 89.7 bits (98), Expect = 2e-12
Identities = 240/359 (67%), Gaps = 11/359 (3%)
Strand=Plus/Minus
Query 188738 ATGATGGAGTAAAGATCAAAAAATCTAATGTTCTTTTAGTTGGCCCTACTGGTTCAGGTA 188797
|||||| |||| | ||||| |||| || | | |||| || ||||| |||||||
Sbjct 3696328 ATGATGACATAAAACTTGAAAAAAGTAATATTTTGCTGCTTGGACCAACTGGGTCAGGTA 3696269
Query 188798 AAACATTATTTGCTCAAACATTGGCTGATATG-TTACATGTACCTCTAGCTATCTCTGAT 188856
|||| | | || ||||| | ||| | ||| | |||| ||| | ||||||| |||
Sbjct 3696268 AAACCCTGCTGGCACAAACCCTAGCT-AAATGCCTTGATGTCCCTTTTGCTATCTGTGAC 3696210
Query 188857 GCAACTTCTTTAACAGAAGCTGGTTATGTAGGTGAAGATGTGGAAAACGT-ATTGCTTCG 188915
|| |||| || | ||||| ||||| ||||||||| | ||| || ||||
Sbjct 3696209 TGTACAACTTTGACTCAGGCTGGATATGTGGGTGAAGATATTGAATCTGTGATTG-GCAA 3696151
Query 188916 TTTAATCCAAGCAGCTGATTACGATATCGAATTAGCGGAACGTGGAATTGTATATATCGA 188975
|| |||||| || |||| | | ||| ||| ||| |||||||| | | | ||
Sbjct 3696150 ACTACTCCAAGATGCCAATTATAACGTGGAAAAAGCACAACAAGGAATTGTCTTTCTGGA 3696091
Query 188976 TGAAGTAGATAAAATTGCTAGAAAATCAGAAAGCA--CATCCATTACCCGAGATGTATCT 189033
||||||||||| |||| || || ||| |||| ||||| | |||||| |
Sbjct 3696090 CGAAGTAGATAAGATTGGCAGTGTGCTAG---GCATTCATCAATTACAC--GATGTAGGT 3696036
Query 189034 GGCGAAGGAGTACAGCAAGCTTTATTAAAAATCATTGAAGGTACAGTTGCGAAAGTTCC 189092
|| ||||| || ||||||| ||| ||||| | | ||||| ||| | | || |||||
Sbjct 3696035 GGAGAAGGCGTTCAGCAAGGCTTACTAAAACTACTAGAAGGCACAATAGTCAATGTTCC 3695977
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1591764443705088
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |