Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cebus_20capucinus_20imitator_20[refseq_20GCF_5F001604975.1_202016- 04-04] 7,156 sequences; 2,717,703,182 total letters Query= NC_024303.1 Length=144898 Score E Sequences producing significant alignments: (Bits) Value seq2 89.7 5e-13 >seq2 Length=18007423 Score = 89.7 bits (98), Expect = 5e-13 Identities = 127/176 (72%), Gaps = 2/176 (1%) Strand=Plus/Minus Query 21122 TCTAGCATTTGGGGGCCTAGCTGCGATGGCTTAGATTGCATTGTTAAGCGGTGTGAACTG 21181 || ||||| ||||| || | || |||||| | ||| | |||||| |||| ||||| ||| Sbjct 2251504 TCCAGCATATGGGGACCAACGTGTGATGGCCTCGATCGGATTGTTGAGCGCTGTGACCTG 2251445 Query 21182 CCAGAGCTTCAAGTGGGCGACTGGCTCATATTTGAAAACATGGGCGCTTACAGCTTGGTC 21241 || || | || ||||| || ||| | | |||||||| ||||||||||||| | | Sbjct 2251444 CCTGAAATGCATGTGGGTGATTGGATGCTCTTTGAAAATATGGGCGCTTACACTGTTGCT 2251385 Query 21242 AGCTCTTCAACCTTTAACGGCTTCCCAAAGCCAGAAAAGC-ACTATGTTATTTCAG 21296 | | || || || || ||||| ||| || | || || | ||||||| || |||| Sbjct 2251384 GCCGCGTCTACTTTCAATGGCTT-CCAGAGGCCGACAATCTACTATGTGATGTCAG 2251330 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 463504135846080