Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cebus_20capucinus_20imitator_20[refseq_20GCF_5F001604975.1_202016-
04-04] 7,156 sequences; 2,717,703,182 total letters
Query= NC_026440.1
Length=2243109
Score E
Sequences producing significant alignments: (Bits) Value
seq76 176 6e-38
seq826 170 3e-36
seq682 170 3e-36
seq336 170 3e-36
seq189 170 3e-36
seq1086 167 3e-35
seq787 167 3e-35
seq257 158 2e-32
seq127 140 5e-27
seq526 136 6e-26
seq599 122 1e-21
seq832 113 6e-19
seq2 107 3e-17
seq630 100 4e-15
seq1215 96.9 5e-14
seq659 96.9 5e-14
seq919 95.1 2e-13
>seq76
Length=7665841
Score = 176 bits (194), Expect = 6e-38
Identities = 177/229 (77%), Gaps = 6/229 (3%)
Strand=Plus/Plus
Query 724912 TCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCA 724971
||||||||||||| ||||||||||| ||| |||| |||| || |||| |||
Sbjct 852089 TCTACAAGGTGCTGAAGCAGGTGCATCCCGACACCGG-----CATC-TCGTCCAAGGCCA 852142
Query 724972 TGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTC 725031
|| ||||||||||| || ||||| ||||| |||| ||||||| || ||||||| |
Sbjct 852143 TGGGCATCATGAACTCCTTCGTCAATGACATCTTCGAGCGCATCGCCAGCGAGGCCTCCC 852202
Query 725032 GCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGC 725091
||||||||| || |||||||||| ||| ||| | |||||| | ||||| |||||||
Sbjct 852203 GCCTGGCGCACTACAACAAGCGCTCCACCATCACGTCTCGCGAGGTGCAGACGGCCGTGC 852262
Query 725092 GCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCAC 725140
||||| | ||| ||| || ||||| | ||||||||| |||||||||||
Sbjct 852263 GCCTGCTGCTGCCCGGTGAGCTGGCGAAGCACGCCGTGTCCGAGGGCAC 852311
Score = 170 bits (188), Expect = 3e-36
Identities = 176/229 (77%), Gaps = 6/229 (3%)
Strand=Plus/Minus
Query 724912 TCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCA 724971
||||||||||||| ||||||||||| ||| |||| |||| || |||| |||
Sbjct 858227 TCTACAAGGTGCTGAAGCAGGTGCATCCCGACACCGG-----CATC-TCGTCCAAGGCCA 858174
Query 724972 TGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTC 725031
|| ||||||||||| || ||||| ||||| |||| || |||| || ||||||| |
Sbjct 858173 TGGGCATCATGAACTCCTTCGTCAATGACATCTTCGAGCGGATCGCCAGCGAGGCCTCCC 858114
Query 725032 GCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGC 725091
||||||||| || |||||||||| ||| ||| | |||||| | ||||| |||||||
Sbjct 858113 GCCTGGCGCACTACAACAAGCGCTCCACCATCACGTCTCGCGAGGTGCAGACGGCCGTGC 858054
Query 725092 GCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCAC 725140
||||| | ||| ||| || ||||| | ||||||||| |||||||||||
Sbjct 858053 GCCTGCTGCTGCCCGGTGAGCTGGCAAAGCACGCCGTGTCCGAGGGCAC 858005
>seq826
Length=424606
Score = 170 bits (188), Expect = 3e-36
Identities = 176/229 (77%), Gaps = 10/229 (4%)
Strand=Plus/Minus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||||||||| ||||||||||||||| |||| |||| ||| |||| |||||
Sbjct 39074 TACAAGGTGCTGAAGCAGGTGCACCCCGACACCGG-----CATC-TCCTCCAAGGCCATG 39021
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
||||||||||| || ||||||||||| |||| |||||| | |||||| |||
Sbjct 39020 GGCATCATGAACTCCTTCGTCAACGACATCTTCGAGTGCATCGCCGGCGAGGCTTCCCGC 38961
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||||| | ||||||||| || |||| | || ||||||||||| |||||||||
Sbjct 38960 CTGGCGCATTACAACAAGCG----ACCATCGCTTCCCGGGAGATCCAGACGGCCGTGCGC 38905
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
||| | ||| ||| || ||||||| ||||||||| || ||||||||||
Sbjct 38904 CTGCTGCTGCCCGGGGAGCTGGCCAAGCACGCCGTGTCGGAGGGCACCA 38856
>seq682
Length=724433
Score = 170 bits (188), Expect = 3e-36
Identities = 176/229 (77%), Gaps = 6/229 (3%)
Strand=Plus/Plus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||||||||| ||||||||||||||| |||| |||| ||| |||| |||||
Sbjct 14440 TACAAGGTGCTGAAGCAGGTGCACCCCGACACCGG-----CATC-TCCTCCAAGGCCATG 14493
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
||||||||||| || ||||||||||| |||| ||||||| |||||| |||
Sbjct 14494 GGCATCATGAACTCCTTCGTCAACGACATCTTCGAGCGCATCGCGGGCGAGGCTTCCCGC 14553
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||||| | |||||||||| || ||| | | | ||||||||||| |||||||||
Sbjct 14554 CTGGCGCATTACAACAAGCGCTCGACCATCACCTCCAGGGAGATCCAGACGGCCGTGCGC 14613
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
||| | ||| ||| || ||||||| ||||||||| || ||||||||||
Sbjct 14614 CTGCTGCTGCCCGGGGAGCTGGCCAAGCACGCCGTGTCAGAGGGCACCA 14662
>seq336
Length=2558000
Score = 170 bits (188), Expect = 3e-36
Identities = 176/229 (77%), Gaps = 6/229 (3%)
Strand=Plus/Plus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||||||||| |||||||| |||||| |||| |||| ||| |||| |||||
Sbjct 170986 TACAAGGTGCTGAAGCAGGTCCACCCCGACACCGG-----CATC-TCCTCCAAGGCCATG 171039
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
||||||||||| || ||||||||||| |||| ||||||| |||||| |||
Sbjct 171040 GGCATCATGAACTCCTTCGTCAACGACATCTTCGAGCGCATCGCGGGCGAGGCTTCCCGC 171099
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||||| | |||||||||| || ||| | | | ||||||||||| |||||||||
Sbjct 171100 CTGGCGCATTACAACAAGCGCTCGACCATCACCTCCAGGGAGATCCAGACAGCCGTGCGC 171159
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
||| | ||| ||| |||||||||| ||||||||| || ||||||||||
Sbjct 171160 CTGCTGCTGCCCGGGGAACTGGCCAAGCACGCCGTGTCGGAGGGCACCA 171208
Score = 167 bits (184), Expect = 3e-35
Identities = 175/229 (76%), Gaps = 6/229 (3%)
Strand=Plus/Minus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||||||||| |||||||| |||||| |||| |||| ||| |||| |||||
Sbjct 105316 TACAAGGTGCTGAAGCAGGTCCACCCCGACACCGG-----CATC-TCCTCCAAGGCCATG 105263
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
||||||||||| || ||||||||||| |||| ||||||| |||||| |||
Sbjct 105262 GGCATCATGAACTCCTTCGTCAACGACATCTTCGAGCGCATCGCGGGCGAGGCTTCCCGC 105203
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||||| | |||||||||| || ||| | | | ||||||||||| |||||||||
Sbjct 105202 CTGGCGCATTACAACAAGCGCTCGACCATCACCTCCAGGGAGATCCAGACGGCCGTGCGC 105143
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
||| | ||| ||| || ||||||| ||||||||| || ||||||||||
Sbjct 105142 CTGCTGCTGCCCGGGGAGCTGGCCAAGCACGCCGTGTCGGAGGGCACCA 105094
Score = 163 bits (180), Expect = 4e-34
Identities = 173/227 (76%), Gaps = 6/227 (3%)
Strand=Plus/Plus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||||||||| |||||||| |||||| |||| |||| ||| |||| |||||
Sbjct 230234 TACAAGGTGCTGAAGCAGGTCCACCCCGACACCGG-----CATC-TCCTCCAAGGCCATG 230287
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
|||||||| || || ||||| ||||| |||| ||||||| | |||||| |||
Sbjct 230288 GGCATCATGAATTCCTTCGTCAATGACATCTTCGAGCGCATCGCCGGCGAGGCTTCCCGC 230347
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||||| | |||||||||| || ||| | | | ||||||||||| |||||||||
Sbjct 230348 CTGGCGCATTACAACAAGCGCTCGACCATCACCTCCAGGGAGATCCAGACGGCCGTGCGC 230407
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCAC 725140
||| | ||| || |||||||||| ||||||||| |||||||||||
Sbjct 230408 CTGCTGCTGCCTGGAGAACTGGCCAAGCACGCCGTGTCCGAGGGCAC 230454
Score = 161 bits (178), Expect = 1e-33
Identities = 174/229 (76%), Gaps = 6/229 (3%)
Strand=Plus/Plus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||||||||| |||||||| |||||| |||| |||| ||| |||| |||||
Sbjct 87271 TACAAGGTGCTGAAGCAGGTCCACCCCGACACCGG-----CATC-TCCTCCAAGGCCATG 87324
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
||||||||||| || ||||||||||| |||| ||||||| |||||| |||
Sbjct 87325 GGCATCATGAACTCCTTCGTCAACGACATCTTCGAGCGCATCGCGGGCGAGGCTTCCCGC 87384
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||||| | |||||||||| || ||| | | | ||||||||||| |||||||||
Sbjct 87385 CTGGCGCATTACAACAAGCGCTCGACCATCACCTCCAGGGAGATCCAGACGGCCGTGCGC 87444
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
||| | ||| ||| || ||||||| |||||| || || ||||||||||
Sbjct 87445 CTGCTGCTGCCCGGGGAGCTGGCCAAGCACGCGGTGTCGGAGGGCACCA 87493
Score = 158 bits (174), Expect = 2e-32
Identities = 172/227 (76%), Gaps = 6/227 (3%)
Strand=Plus/Minus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||||||||| |||||||| |||||| |||| |||| ||| |||| |||||
Sbjct 143658 TACAAGGTGCTGAAGCAGGTCCACCCCGACACCGG-----CATC-TCCTCCAAGGCCATG 143605
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
||||||||||| || ||||||||||| |||| ||||||| ||||| |||
Sbjct 143604 GGCATCATGAACTCCTTCGTCAACGACATCTTCGAGCGCATCGCGGGTGAGGCTTCCCGC 143545
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||||| | |||||||||| || ||| | | | ||||||||||| |||||||||
Sbjct 143544 CTGGCGCATTACAACAAGCGCTCGACCATCACCTCCAGGGAGATCCAGACGGCCGTGCGC 143485
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCAC 725140
||| | ||| ||| || ||||||| |||||| || |||||||||||
Sbjct 143484 CTGCTGCTGCCCGGGGAGCTGGCCAAGCACGCGGTGTCCGAGGGCAC 143438
Score = 149 bits (164), Expect = 9e-30
Identities = 170/227 (75%), Gaps = 6/227 (3%)
Strand=Plus/Minus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||||||||| |||||||| |||||| |||| |||| || |||| |||||
Sbjct 118954 TACAAGGTGCTGAAGCAGGTCCACCCCGACACCGG-----CATC-TCTTCCAAGGCCATG 118901
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
||||||||||| || ||||||||||| |||| ||||||| ||||| |||
Sbjct 118900 GGCATCATGAACTCCTTCGTCAACGACATCTTCGAGCGCATCGCGGGTGAGGCTTCCCGC 118841
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||||| | |||||||||| || ||| | | | ||||||||||| |||||||||
Sbjct 118840 CTGGCGCATTACAACAAGCGCTCGACCATCACCTCCAGGGAGATCCAGACGGCCGTGCGC 118781
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCAC 725140
||| | ||| ||| || ||||||| |||||| || || ||||||||
Sbjct 118780 CTGCTGCTGCCCGGGGAGCTGGCCAAGCACGCAGTGTCGGAGGGCAC 118734
Score = 96.9 bits (106), Expect = 5e-14
Identities = 160/230 (70%), Gaps = 6/230 (3%)
Strand=Plus/Plus
Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970
||||||||||| || |||||||| |||||| || ||| || ||||| | |
Sbjct 513451 ATCTACAAGGTACTGAAGCAGGTTCACCCCGACAC---TGGAATCTCTTCCAA---GGCT 513504
Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030
||| || ||||| || ||||| | |||| | || ||||| | || |||||
Sbjct 513505 ATGAGTATTATGAATTCTTTTGTTAGTGACAATTTTGAGCGCATTGCCAATGAGGCTTCC 513564
Query 725031 CGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTG 725090
|||||||||| | |||||||| || ||| | | | ||||||||||| ||||||
Sbjct 513565 CGCCTGGCGCATTATGACAAGCGCTCAACCATCACCTCCAGGGAGATCCAGACGGCCGTG 513624
Query 725091 CGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCAC 725140
|||||| | ||| || ||||| |||| |||| || || ||||||||
Sbjct 513625 CGCCTGCTGCTGCCTGGGGAACTAGCCAAATACGCGGTGTCAGAGGGCAC 513674
Score = 87.8 bits (96), Expect = 3e-11
Identities = 160/230 (70%), Gaps = 6/230 (3%)
Strand=Plus/Minus
Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970
|||||||||||||| |||||||| || || || | ||| ||| |||| ||| ||
Sbjct 518095 ATCTACAAGGTGCTGAAGCAGGTCCA-TCCGGA--CACTGGCATATCTTCCA--AAG-CC 518042
Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030
||| || ||||| || || |||| ||||| | || || || | | ||||||
Sbjct 518041 ATGAGCATTATGAATTCCTTCGTCACTGACATATTTGAGCGTATAGCGAGCGAGGCATCA 517982
Query 725031 CGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTG 725090
||| | || | || |||||||||| ||| || | | ||||| ||||| || |||
Sbjct 517981 CGCTTAGCTCACTACAACAAGCGCTCCACCATTACTTCCAGAGAGATTCAGACAGCAGTG 517922
Query 725091 CGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCAC 725140
|| ||| | ||| || || ||||| | ||| ||||| || ||||||||
Sbjct 517921 CGTCTGCTGCTGCCGGGAGAGCTGGCTAAGCATGCCGTGTCTGAGGGCAC 517872
>seq189
Length=6620563
Score = 170 bits (188), Expect = 3e-36
Identities = 175/229 (76%), Gaps = 6/229 (3%)
Strand=Plus/Plus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||||||||| |||||||| |||||| |||| ||||| ||| |||||
Sbjct 6328747 TACAAGGTGCTGAAGCAGGTCCACCCCGACACCGGCATTTCATCC------AAGGCCATG 6328800
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
||||||||||| || ||||||||||| |||| ||||||| ||||| |||
Sbjct 6328801 GGCATCATGAACTCCTTCGTCAACGACATCTTCGAGCGCATCGCGGGGGAGGCGTCCCGC 6328860
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||||| || |||||||||| || ||| | |||||||||||||| |||||||||
Sbjct 6328861 CTGGCGCACTACAACAAGCGCTCGACCATCACGTCCCGCGAGATCCAGACGGCCGTGCGC 6328920
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
||| | ||| |||||| ||||||| ||||||||| |||||||||||||
Sbjct 6328921 CTGCTGCTGCCCGGCGAGCTGGCCAAGCACGCCGTGTCCGAGGGCACCA 6328969
Score = 170 bits (188), Expect = 3e-36
Identities = 176/229 (77%), Gaps = 6/229 (3%)
Strand=Plus/Plus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||||||||| |||||||| |||||| |||| |||| || || |||||
Sbjct 6383851 TACAAGGTGCTGAAGCAGGTCCACCCCGACACCGG-----CATC-TCGTCGAAAGCCATG 6383904
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
||||||||||| || ||||||||||| |||| ||||||| ||||| |||
Sbjct 6383905 GGCATCATGAACTCCTTCGTCAACGACATCTTCGAGCGCATCGCGGGGGAGGCGTCCCGC 6383964
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||||| || |||||||||| ||| ||| | |||||||||||||| |||||||||
Sbjct 6383965 CTGGCGCACTACAACAAGCGCTCCACCATCACGTCCCGCGAGATCCAGACGGCCGTGCGC 6384024
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
||| | ||| |||||| ||||||| ||||||||| |||||||||||||
Sbjct 6384025 CTGCTGCTGCCCGGCGAGCTGGCCAAGCACGCCGTGTCCGAGGGCACCA 6384073
Score = 104 bits (114), Expect = 3e-16
Identities = 133/182 (73%), Gaps = 5/182 (3%)
Strand=Plus/Minus
Query 724964 CAAGTCCATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGA 725023
|||| || || ||| ||||||| || ||||| |||| ||| ||||||| | ||
Sbjct 6367224 CAAGGCCGTGGGCATCTTGAACTCTTTCCTCAACAACATCTCCGAGCGCATCGCGTCGGA 6367165
Query 725024 GGCCGGTC---GCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCA 725080
||| ||| ||| ||||| || ||||||| || ||| || | | |||||||||
Sbjct 6367164 GGC--GTCCTTGCCCGGCGCACTACAACAAGGGCTCCACCGTCACATCCCCCGAGATCCA 6367107
Query 725081 GACCGCCGTGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCAC 725140
||||||| |||| || | ||| |||| | ||||||| ||||| ||| |||||||||||
Sbjct 6367106 GACCGCCAAGCGCTTGCTGCTGCCCGGCCAGCTGGCCAAGCACGGCGTGTCCGAGGGCAC 6367047
Query 725141 CA 725142
||
Sbjct 6367046 CA 6367045
Score = 102 bits (112), Expect = 1e-15
Identities = 125/169 (74%), Gaps = 5/169 (3%)
Strand=Plus/Plus
Query 724977 ATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTC---GC 725033
||| ||||||| ||| |||||||||| || ||||||| | ||||| ||| |
Sbjct 6359278 ATCTTGAACTCTTTTCTCAACGACATCTCTGAGCGCATCGCGTCGGAGGC--GTCCTTGT 6359335
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
| ||||| || |||| ||||| || || | | ||||||||||||||||| ||||
Sbjct 6359336 CCGGCGCACTACAACCAGCGCTCTACCGTCACATCCCCCGAGATCCAGACCGCCGAGCGC 6359395
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
|| | ||| |||| | ||||||| ||||| ||| |||||||||||||
Sbjct 6359396 CTACTGCTGCCCGGCCAGCTGGCCAAGCACGGCGTGTCCGAGGGCACCA 6359444
>seq1086
Length=61194
Score = 167 bits (184), Expect = 3e-35
Identities = 175/229 (76%), Gaps = 6/229 (3%)
Strand=Plus/Minus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||||||||| |||||||| |||||| |||| |||| ||| |||| |||||
Sbjct 45315 TACAAGGTGCTGAAGCAGGTCCACCCCGACACCGG-----CATC-TCCTCCAAGGCCATG 45262
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
||||||||||| || ||||||||||| |||| ||||||| |||||| |||
Sbjct 45261 GGCATCATGAACTCCTTCGTCAACGACATCTTCGAGCGCATCGCGGGCGAGGCTTCCCGC 45202
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||||| | |||||||||| || ||| | | | ||||||||||| |||||||||
Sbjct 45201 CTGGCGCATTACAACAAGCGCTCGACCATCACCTCCAGGGAGATCCAGACGGCCGTGCGC 45142
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
||| | ||| ||| || ||||||| ||||||||| || ||||||||||
Sbjct 45141 CTGCTGCTGCCCGGGGAGCTGGCCAAGCACGCCGTGTCGGAGGGCACCA 45093
>seq787
Length=392654
Score = 167 bits (184), Expect = 3e-35
Identities = 175/229 (76%), Gaps = 6/229 (3%)
Strand=Plus/Plus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||||||||| |||||||| |||||| |||| |||| ||| |||| |||||
Sbjct 20693 TACAAGGTGCTGAAGCAGGTCCACCCCGACACCGG-----CATC-TCCTCCAAGGCCATG 20746
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
||||||||||| || ||||||||||| |||| ||||||| |||||| |||
Sbjct 20747 GGCATCATGAACTCCTTCGTCAACGACATCTTCGAGCGCATCGCGGGCGAGGCTTCCCGC 20806
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||||| | |||||||||| || ||| | | | ||||||||||| |||||||||
Sbjct 20807 CTGGCGCATTACAACAAGCGCTCGACCATCACCTCCAGGGAGATCCAGACGGCCGTGCGC 20866
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
||| | ||| ||| || ||||||| |||||| || |||||||||||||
Sbjct 20867 CTGCTGCTGCCCGGGGAGCTGGCCAAGCACGCGGTGTCCGAGGGCACCA 20915
Score = 89.7 bits (98), Expect = 7e-12
Identities = 106/144 (74%), Gaps = 0/144 (0%)
Strand=Plus/Plus
Query 724999 ACATGATCGACCGCATCGGCACCGAGGCCGGTCGCCTGGCGCGCTCCAACAAGCGCAACA 725058
|||| |||| | ||||| |||||| |||||||||| | ||||| ||| |
Sbjct 3862 ACATCTTCGAGCACATCGCAGGCGAGGCTTCCCGCCTGGCGCATTTTAACAACCGCTTGA 3921
Query 725059 CGATCGGCACGCGCGAGATCCAGACCGCCGTGCGCCTGATCATGCGCGGCGAACTGGCCA 725118
| ||| | | | ||||||||||| |||||||||||| | ||| || || |||||||
Sbjct 3922 CCATCATCTCCAGGGAGATCCAGACGGCCGTGCGCCTGCTGCTGCCTGGGGAGCTGGCCA 3981
Query 725119 GGCACGCCGTCTCCGAGGGCACCA 725142
|||||||| |||||||||||||
Sbjct 3982 ACCACGCCGTGTCCGAGGGCACCA 4005
>seq257
Length=3199652
Score = 158 bits (174), Expect = 2e-32
Identities = 174/229 (76%), Gaps = 7/229 (3%)
Strand=Plus/Minus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||||||||| ||||||||||||||| |||| |||| ||| |||| |||||
Sbjct 3166250 TACAAGGTGCTGAAGCAGGTGCACCCCGACACCGG-----CATC-TCCTCCAAGGCCATG 3166197
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
||||||||||| || ||||||||||| |||| ||||||| |||||| |||
Sbjct 3166196 GGCATCATGAACTCCTTCGTCAACGACATCTTCGAGCGCATCGCGGGCGAGGCTTCCCGC 3166137
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||||| | || ||||||| || ||| | | | ||||||||||| |||||||||
Sbjct 3166136 CTGGCGCATTACA-CAAGCGCTCGACCATCACCTCCAGGGAGATCCAGACAGCCGTGCGC 3166078
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
||| | || ||| || ||||||| |||||| || |||||||||||||
Sbjct 3166077 CTGCTGCCGCCCGGGGAGCTGGCCAAGCACGCGGTGTCCGAGGGCACCA 3166029
>seq127
Length=5421774
Score = 140 bits (154), Expect = 5e-27
Identities = 169/229 (74%), Gaps = 6/229 (3%)
Strand=Plus/Plus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||||||||| |||||||| |||||| |||| |||| ||| |||| |||||
Sbjct 3875531 TACAAGGTGCTGAAGCAGGTCCACCCCGACACCGG-----CATC-TCCTCCAAGGCCATG 3875584
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
||||||||||| || ||||||||||| || | ||||||| |||||| |||
Sbjct 3875585 GGCATCATGAACTCCTTCGTCAACGACATCTTCAAGCGCATCGCGGGCGAGGCTTCCCGC 3875644
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||| | | ||||||| || || ||| | | | ||||||||||| || ||||||
Sbjct 3875645 CTGGCACATTACAACAAGAGCTCGACCATCACCTCCAGAGAGATCCAGACGGCTGTGCGC 3875704
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
||| | ||| || || ||||||| |||||| || ||||| |||||||
Sbjct 3875705 CTGTTGCTGCCTGGGGAGCTGGCCAAGCACGCAGTGTCCGAAGGCACCA 3875753
>seq526
Length=1402496
Score = 136 bits (150), Expect = 6e-26
Identities = 377/567 (66%), Gaps = 17/567 (3%)
Strand=Plus/Minus
Query 1455716 GAGCCGCTGCTGCGCGATAACCCGAACCGCTTTGTCCTGTTCCCCATCCGCTACCAGCGG 1455775
||||||||||| | || ||||| |||||||||| | ||||||||| |||||
Sbjct 114293 GAGCCGCTGCTAAGAGAAAACCCTCGCCGCTTTGTCATTTTCCCCATCGAGTACCACAAC 114234
Query 1455776 ATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACCT 1455835
|| ||| | ||| | || ||||| || |||||||| |||| ||| |||||||| |||||
Sbjct 114233 ATCTGGCAGATGCA-TAAGAAGGCGGACGCCTCCTTCTGGAGCGCTGAGGAGGTAGACCT 114175
Query 1455836 CGGCGCCGAC--ACGGTCCACTGGGTGTCGCTGAGCGACGACGAGCGCCATTTCATCAAG 1455893
| ||| |||| ||||||| || |||| || ||| | | || ||
Sbjct 114174 GTCCAAGGACATACGG--CACTGGGAATCCCTGAAGCCTGAGGAGAGATACTTTATATCT 114117
Query 1455894 CACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGCCG 1455953
||||| || | |||| | || || || |||||||| || || ||| ||| | ||
Sbjct 114116 CACGTTCT-GGCTTTCCTTGCAGCAAGTGATGGCATAGTAAATGAAAACTTGGTGGAGCG 114058
Query 1455954 CTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCCAT 1456013
|||| |||| | || | |||| | | | || || || ||||| || |||||
Sbjct 114057 ATTTAGCCAAGAACTTCAGATTACAGAAGGCTGCTGTTTCTATGGCTTCCAAATTGCCAT 113998
Query 1456014 CGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCCGGT 1456073
|||||||| || ||||||| || ||||| |||||||| ||| | || || ||
Sbjct 113997 GGAAAACATACATTCTGAAATGTATGGTCTCCTTATCGACACTTACATAAAAGATCCCAA 113938
Query 1456074 CGAGAAGGACCACCTCTTTCGCGCCATCGACACGGTGCCGTCGGTGAGGAAAAAGGCCGA 1456133
|| | ||| ||||| ||||| || ||| |||| | || | || ||||| ||
Sbjct 113937 TGAAAGGGAATTTCTCTTCAATGCCATTGAAACGATGCCTTGTGTCAACAAGAAGGCAGA 113878
Query 1456134 CTGGGCGATGAAGTGGAT---CAACAAGGAGGGCCTCGACACTTTGCCGAGCGGCTCGTC 1456190
||||| || ||||| |||| |||| | || || || || || | ||
Sbjct 113877 TTGGGCCTTGCGCTGGATTGGGGACAAAGAGG----CTAC-CTATGGTGAACGCGTTGTA 113823
Query 1456191 GGCTTTGCCGC-GTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGC-GCCATCTTTTGGCT 1456248
| |||||| || || || ||||||| || || || ||| ||| |||| || |||||
Sbjct 113822 GCCTTTGCTGCAGTGGAAGGCATCTACTTTTCTGGTTCTTT-TGCATCCATATTCTGGCT 113764
Query 1456249 CAAGAAGCGCGGCCTCATGCCCGGTCT 1456275
|||||| | || || ||||| || ||
Sbjct 113763 CAAGAAATGAGGACTGATGCCTGGCCT 113737
>seq599
Length=1005688
Score = 122 bits (134), Expect = 1e-21
Identities = 165/229 (72%), Gaps = 6/229 (3%)
Strand=Plus/Plus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||||||||| ||||||||||||||| ||| |||| || | ||| |||||
Sbjct 294094 TACAAGGTGCTGAAGCAGGTGCACCCCGACACCAG-----CATCTTCTAG-AAGGCCATG 294147
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
||||||||||| || ||||||||||| | || ||||||| | |||| |||
Sbjct 294148 GGCATCATGAACTCCTTCGTCAACGACATCTTTGAGCGCATCGTGGGCAAGGCTTCCCGC 294207
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
|||| || | |||||||| | || ||| | | ||||||||||| ||||||| |
Sbjct 294208 CTGGTGCATTGCAACAAGCCCTCGACCATCACCTCCAAGGAGATCCAGACGGCCGTGCTC 294267
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
||| | || || || ||||||| ||| ||||| || ||||||||||
Sbjct 294268 CTGCTGCTGGCTGGGGAGCTGGCCAAGCAAGCCGTGTCGGAGGGCACCA 294316
>seq832
Length=407294
Score = 113 bits (124), Expect = 6e-19
Identities = 92/112 (82%), Gaps = 0/112 (0%)
Strand=Plus/Minus
Query 725031 CGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTG 725090
|||||||||| || |||||||||| ||| ||| | |||||||||||||| ||||||
Sbjct 389357 CGCCTGGCGCACTACAACAAGCGCTCCACCATCACGTCCCGCGAGATCCAGACGGCCGTG 389298
Query 725091 CGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
|||||| | ||| || || ||||||| ||||||||| |||||||||||||
Sbjct 389297 CGCCTGCTGCTGCCGGGTGAGCTGGCCAAGCACGCCGTGTCCGAGGGCACCA 389246
>seq2
Length=18007423
Score = 107 bits (118), Expect = 3e-17
Identities = 93/114 (82%), Gaps = 1/114 (1%)
Strand=Plus/Plus
Query 1455716 GAGCCGCTGCTGCGCGATAACCCGAACCGCTTTGTCCTGTTCCCCATCCGCTACCAGCGG 1455775
|||||||||||| | || |||||| |||||||||| | ||||||||| |||||
Sbjct 1937618 GAGCCGCTGCTGAGAGAGAACCCGCGCCGCTTTGTCATTTTCCCCATCGAGTACCACGAT 1937677
Query 1455776 ATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGT 1455829
|| ||| | ||||| ||| ||||| ||||||||||| |||||||||||||||||
Sbjct 1937678 ATCTGGCAGATGTA-CAAGAAGGCGGAGGCCTCCTTCTGGACCGCCGAGGAGGT 1937730
>seq630
Length=879232
Score = 100 bits (110), Expect = 4e-15
Identities = 320/490 (65%), Gaps = 21/490 (4%)
Strand=Plus/Minus
Query 1455792 AAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACCTCGGCGCCGACA--CGG 1455849
|| ||| | ||||||||||||||||||||||| ||||| |||| | |||| |||
Sbjct 418359 AACAAGACGGAGGCCTCCTTTTGGACCGCCGAAGAGGTGGACCCGTCCAAGGACATTCGG 418300
Query 1455850 TCCACTGGGTGTCGCTGAGCGACGACGAGCGCCATTTCATCAAGCACGTCCTCGCCTTTT 1455909
||||||| || |||| ||| ||| | || || || ||||| || | |||
Sbjct 418299 --CACTGGGAATCCCTGAAGCCCGAGGAGAGACACTTTATATCCCACGTTCT-GAGTTTC 418243
Query 1455910 TTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGCCGCTTTATGAAAGAGGTC 1455969
|| || || || || ||||| || || ||| ||| | || |||| |||| ||
Sbjct 418242 TTTGCAGCAAGTGACGGCATAGTAAATGAAAACTTGGTGGAGCGATTTAGCCAAGAAGTT 418183
Query 1455970 CAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCCATCGAAAACATCCACTCT 1456029
|| | ||||||| || | || || || ||||| || | ||| || ||||| || |||
Sbjct 418182 CAGATTACAGAGGCCCGCTGTTTCTATGGATTCCAAATTGGCATGGACAACATACATTCT 418123
Query 1456030 GAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCCGGTCGAGAAGGACCACCTC 1456089
|||| || ||||| | ||||| || | || || || ||| | ||| |||
Sbjct 418122 GAAATGTATAGTCTCCTTACTGACACGTATATAAAAGATCCCAGCGAAAGGGAATTTCTC 418063
Query 1456090 TTTCGCGCCATCGACACGGTGCCGTCGGTGAGGAAAAAGGCCGACTGGGCGATGAAGTGG 1456149
|| ||||| || ||| |||| | || | ||| ||||| ||| |||| || |||
Sbjct 418062 TTCAATGCCATTGAAACGATGCCTTGTGTCAAGAAGAAGGCAGACCGGGCCTTGCGCTGG 418003
Query 1456150 AT---CAACAAGGAGGGCCTCGACACTTTGCCGAGCGGCTCGTCGGCTTTGCCGC-GTCG 1456205
|| |||| |||| | || || || || | || |||||| || || |
Sbjct 418002 ATTGGGGACAAAGAGG----CTAC-CTATGGTGAACTGC-------CTTTGCTGCAGTGG 417955
Query 1456206 AGGGCATCTTTTTCTCGGGCAGTTTCTGCGCCATCTTTTGGCTCAAGAAGCGCGGCCTCA 1456265
| ||| |||| || || || ||| |||| || ||||| ||||| || || || |
Sbjct 417954 AAGGCGTCTTCTTTTCTGGTTCTTTAGCTTCCATATTCTGGCTTAAGAAACGAGGACTGA 417895
Query 1456266 TGCCCGGTCT 1456275
|||| || ||
Sbjct 417894 TGCCTGGCCT 417885
>seq1215
Length=26091
Score = 96.9 bits (106), Expect = 5e-14
Identities = 107/143 (75%), Gaps = 0/143 (0%)
Strand=Plus/Minus
Query 724998 GACATGATCGACCGCATCGGCACCGAGGCCGGTCGCCTGGCGCGCTCCAACAAGCGCAAC 725057
||||| | ||| || ||| | ||||||| ||||||||||| |||||| ||||| |
Sbjct 25092 GACATACTGGACAGCGTCGCCTCCGAGGCAGGTCGCCTGGCCCGCTCCGCCAAGCACGTG 25033
Query 725058 ACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGCCTGATCATGCGCGGCGAACTGGCC 725117
|| ||| | | | ||||||| || ||||||||||||| | ||| || || ||| |
Sbjct 25032 ACCATCACCGCCTGGGAGATCCGGATCGCCGTGCGCCTGCTGCTGCCGGGGGAGATGGGC 24973
Query 725118 AGGCACGCCGTCTCCGAGGGCAC 725140
|||| ||||| |||||||||||
Sbjct 24972 AGGCTCGCCGAGTCCGAGGGCAC 24950
>seq659
Length=1318348
Score = 96.9 bits (106), Expect = 5e-14
Identities = 107/143 (75%), Gaps = 0/143 (0%)
Strand=Plus/Minus
Query 724998 GACATGATCGACCGCATCGGCACCGAGGCCGGTCGCCTGGCGCGCTCCAACAAGCGCAAC 725057
||||| | ||| || ||| | ||||||| ||||||||||| |||||| ||||| |
Sbjct 10213 GACATACTGGACAGCGTCGCCTCCGAGGCAGGTCGCCTGGCCCGCTCCGCCAAGCACGTG 10154
Query 725058 ACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGCCTGATCATGCGCGGCGAACTGGCC 725117
|| ||| | | | ||||||| || ||||||||||||| | ||| || || ||| |
Sbjct 10153 ACCATCACCGCCTGGGAGATCCGGATCGCCGTGCGCCTGCTGCTGCCGGGGGAGATGGGC 10094
Query 725118 AGGCACGCCGTCTCCGAGGGCAC 725140
|||| ||||| |||||||||||
Sbjct 10093 AGGCTCGCCGAGTCCGAGGGCAC 10071
>seq919
Length=361068
Score = 95.1 bits (104), Expect = 2e-13
Identities = 88/112 (79%), Gaps = 0/112 (0%)
Strand=Plus/Plus
Query 725031 CGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTG 725090
|||||||||| | |||||||||| || ||| | | | ||||||||||| ||||||
Sbjct 291453 CGCCTGGCGCATTACAACAAGCGCTCGACCATCACCTCCAGGGAGATCCAGACGGCCGTG 291512
Query 725091 CGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
|||||| | ||| ||| || ||||||| ||| ||||| || ||||||||||
Sbjct 291513 CGCCTGCTGCTGCCCGGGGAGCTGGCCAAGCATGCCGTGTCGGAGGGCACCA 291564
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7177120990647272
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |